Strain Fitness in Pseudomonas sp. RS175 around PFR28_02449

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
2,918,778	-				-0.8
2,918,778	-				-1.5
2,918,925	+				-0.2
2,918,925	+				+1.5
2,918,925	+				-1.1
2,918,925	+				+1.3
2,918,925	+				-0.5
2,918,926	-				-0.3
2,918,926	-				-0.3
2,918,926	-				-1.1
2,918,926	-				+0.2
2,918,926	-				-1.1
2,919,008	+				+0.7
2,919,101	+				+1.7
2,919,101	+				-0.4
2,919,101	+				+0.6
2,919,101	+				-0.7
2,919,101	+				-1.4
2,919,101	+				+1.9
2,919,101	+				-2.0
2,919,101	+				-0.1
2,919,101	+				-0.5
2,919,101	+				-1.0
2,919,101	+				+0.1
2,919,101	+				-0.1
2,919,101	+				+1.3
2,919,102	-				-2.7
2,919,102	-				+1.2
2,919,102	-				-0.3
2,919,102	-				-3.7
2,919,102	-				-0.7
2,919,102	-				-0.5
2,919,102	-				+0.9
2,919,102	-				-0.9
2,919,102	-				-1.2
2,919,102	-				+0.1
2,919,102	-				-1.4
2,919,161	+				-1.1
2,919,161	+				+1.0
2,919,161	+				+0.9
2,919,161	+				+0.5
2,919,161	+				-0.1
2,919,161	+				-1.1
2,919,161	+				+0.2
2,919,162	-				-0.2
2,919,162	-				-0.3
2,919,162	-				+0.7
2,919,162	-				+0.3
2,919,162	-				-1.3
2,919,162	-				-0.0
2,919,162	-				-0.2
2,919,163	+				-0.4
2,919,163	+				-1.0
2,919,163	+				+1.9
2,919,163	+				+0.1
2,919,163	+				+0.4
2,919,163	+				-0.1
2,919,163	+				+0.5
2,919,164	-				+0.3
2,919,164	-				-0.6
2,919,164	-				+1.2
2,919,164	-				-0.0
2,919,164	-				-2.5
2,919,164	-				-1.3
2,919,164	-				-2.5
2,919,164	-				-3.0
2,919,164	-				-0.2
2,919,164	-				+0.9
2,919,216	+				-2.4
2,919,217	-				-1.1
2,919,217	-				-3.5
2,919,237	+				-3.5
2,919,330	+		PFR28_02449	0.15	-3.5
2,919,330	+		PFR28_02449	0.15	+1.2
2,919,330	+		PFR28_02449	0.15	-1.8
2,919,364	-		PFR28_02449	0.19	-0.8
2,919,546	+		PFR28_02449	0.36	-2.6
2,919,642	+		PFR28_02449	0.46	-3.0
2,919,643	-		PFR28_02449	0.46	-1.7
2,919,738	+		PFR28_02449	0.55	-3.9
2,919,738	+		PFR28_02449	0.55	-2.5
2,919,739	-		PFR28_02449	0.55	-2.7
2,919,739	-		PFR28_02449	0.55	-1.9
2,919,794	+		PFR28_02449	0.61	-0.5
2,919,794	+		PFR28_02449	0.61	-0.6
2,919,794	+		PFR28_02449	0.61	-3.3
2,919,794	+		PFR28_02449	0.61	-3.2
2,919,794	+		PFR28_02449	0.61	-2.9
2,919,794	+		PFR28_02449	0.61	-2.5
2,919,794	+		PFR28_02449	0.61	+0.5
2,919,794	+		PFR28_02449	0.61	-1.4
2,919,794	+		PFR28_02449	0.61	-1.1
2,919,794	+		PFR28_02449	0.61	-2.5
2,919,794	+		PFR28_02449	0.61	-1.3
2,919,794	+		PFR28_02449	0.61	-2.8
2,919,795	-		PFR28_02449	0.61	-0.7
2,919,795	-		PFR28_02449	0.61	-1.0
2,919,795	-		PFR28_02449	0.61	-0.5
2,919,795	-		PFR28_02449	0.61	-1.8
2,919,795	-		PFR28_02449	0.61	+1.3
2,919,795	-		PFR28_02449	0.61	-1.0
2,919,795	-		PFR28_02449	0.61	-0.7
2,919,795	-		PFR28_02449	0.61	-2.6
2,919,795	-		PFR28_02449	0.61	+0.8
2,919,795	-		PFR28_02449	0.61	-2.0
2,919,795	-		PFR28_02449	0.61	-0.1
2,919,798	+		PFR28_02449	0.61	-2.1
2,919,798	+		PFR28_02449	0.61	-2.2
2,919,799	-		PFR28_02449	0.61	-1.7
2,919,799	-		PFR28_02449	0.61	-2.3
2,919,799	-		PFR28_02449	0.61	+0.2
2,919,799	-		PFR28_02449	0.61	-2.4
2,919,799	-		PFR28_02449	0.61	+0.5
2,919,799	-		PFR28_02449	0.61	-0.6
2,919,857	+		PFR28_02449	0.67	-0.7
2,920,063	-		PFR28_02449	0.87	-3.7
2,920,063	-		PFR28_02449	0.87	-2.3
2,920,063	-		PFR28_02449	0.87	-3.2
2,920,063	-		PFR28_02449	0.87	-1.0
2,920,063	-		PFR28_02449	0.87	-1.4
2,920,063	-		PFR28_02449	0.87	-2.8
2,920,063	-		PFR28_02449	0.87	-1.8
2,920,063	-		PFR28_02449	0.87	-2.1
2,920,125	+				-0.2
2,920,125	+				-0.1
2,920,125	+				-2.5
2,920,126	-				+0.5
2,920,126	-				-3.0
2,920,208	+				-2.2
2,920,225	+				-0.4
2,920,225	+				+0.4
2,920,225	+				-1.7
2,920,225	+				-0.1
2,920,225	+				-0.5
2,920,226	-				+0.8
2,920,304	+				-0.0
2,920,694	-		PFR28_02450	0.54	-0.1
2,920,694	-		PFR28_02450	0.54	-0.6
2,920,700	+		PFR28_02450	0.55	+1.0
2,920,813	+		PFR28_02450	0.70	+0.4
2,920,813	+		PFR28_02450	0.70	+0.7
2,920,813	+		PFR28_02450	0.70	-2.0
2,920,813	+		PFR28_02450	0.70	-0.8
2,920,814	-		PFR28_02450	0.70	+1.2
2,920,814	-		PFR28_02450	0.70	-0.3
2,920,817	-		PFR28_02450	0.71	-1.7
2,921,036	+				-0.7
2,921,078	+				+0.9
2,921,078	+				-3.0
2,921,078	+				-1.0
2,921,078	+				-1.3
2,921,078	+				-0.3
2,921,078	+				-1.5
2,921,078	+				+0.2
2,921,078	+				+0.2
2,921,079	-				+0.4
2,921,079	-				-0.2
2,921,079	-				-0.8
2,921,079	-				-0.9
2,921,079	-				-0.1
2,921,081	+				-0.3
2,921,081	+				+0.2
2,921,081	+				-0.2
2,921,081	+				+0.8
2,921,081	+				+0.3
2,921,081	+				-0.0
2,921,081	+				-1.4
2,921,081	+				+0.5
2,921,082	-				-0.6
2,921,082	-				-0.5
2,921,082	-				+0.2
2,921,082	-				+1.0
2,921,082	-				+0.1
2,921,082	-				-2.6
2,921,082	-				+0.8
2,921,082	-				-0.2
2,921,082	-				+0.6
2,921,082	-				-1.5
2,921,082	-				+0.0
2,921,082	-				-1.5
2,921,156	-				-0.6
2,921,161	+				-1.3
2,921,161	+				-0.1
2,921,161	+				+0.2
2,921,162	-				+0.5
2,921,162	-				-0.3
2,921,162	-				+0.2
2,921,162	-				+0.7
2,921,162	-				+0.1
2,921,162	-				-2.1
2,921,164	+				-3.5
2,921,165	-				-0.6
2,921,165	-				+0.4