Strain Fitness in Pseudomonas sp. RS175 around PFR28_02330

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
2,782,769	-		PFR28_02328	0.66	+0.2
2,782,769	-		PFR28_02328	0.66	+0.0
2,782,917	+		PFR28_02328	0.89	-1.9
2,782,918	-		PFR28_02328	0.89	-1.5
2,782,918	-		PFR28_02328	0.89	+1.7
2,782,918	-		PFR28_02328	0.89	-0.6
2,782,919	+		PFR28_02328	0.89	+1.5
2,782,919	+		PFR28_02328	0.89	-1.0
2,782,920	-		PFR28_02328	0.89	+0.2
2,782,981	+				-1.1
2,782,981	+				+0.8
2,782,984	+				+1.0
2,782,985	-				+1.8
2,782,985	-				-0.1
2,782,985	-				+1.7
2,783,022	+				-0.7
2,783,023	-				+0.6
2,783,023	-				+0.7
2,783,135	-		PFR28_02329	0.20	-0.6
2,783,170	+		PFR28_02329	0.26	-0.4
2,783,170	+		PFR28_02329	0.26	-1.4
2,783,275	+		PFR28_02329	0.42	-0.2
2,783,275	+		PFR28_02329	0.42	-2.1
2,783,275	+		PFR28_02329	0.42	-0.5
2,783,275	+		PFR28_02329	0.42	+0.1
2,783,275	+		PFR28_02329	0.42	+0.0
2,783,275	+		PFR28_02329	0.42	+0.3
2,783,276	-		PFR28_02329	0.42	+0.3
2,783,276	-		PFR28_02329	0.42	+1.5
2,783,276	-		PFR28_02329	0.42	+0.3
2,783,297	-		PFR28_02329	0.45	+1.1
2,783,297	-		PFR28_02329	0.45	+2.0
2,783,674	+				-1.7
2,783,674	+				-2.0
2,783,674	+				+0.7
2,783,675	-				-0.9
2,783,782	-		PFR28_02330	0.17	-2.5
2,783,782	-		PFR28_02330	0.17	-0.4
2,783,925	+		PFR28_02330	0.35	-0.7
2,784,006	+		PFR28_02330	0.45	-0.4
2,784,007	-		PFR28_02330	0.45	-2.0
2,784,007	-		PFR28_02330	0.45	+0.8
2,784,016	-		PFR28_02330	0.46	-1.4
2,784,039	+		PFR28_02330	0.49	-1.3
2,784,039	+		PFR28_02330	0.49	-0.5
2,784,271	-		PFR28_02330	0.77	-0.5
2,784,271	-		PFR28_02330	0.77	+0.7
2,784,271	-		PFR28_02330	0.77	-0.5
2,784,491	+				-1.9
2,784,492	-				+0.5
2,784,492	-				-2.0
2,784,498	-				-1.0
2,784,498	-				-1.8
2,784,498	-				+0.8
2,784,500	-				+0.2
2,784,625	+		PFR28_02331	0.27	-1.9
2,784,626	-		PFR28_02331	0.27	+0.2
2,784,626	-		PFR28_02331	0.27	+0.3
2,784,626	-		PFR28_02331	0.27	+0.1
2,784,626	-		PFR28_02331	0.27	+0.5
2,784,763	+		PFR28_02331	0.48	+0.5
2,784,763	+		PFR28_02331	0.48	-0.3
2,784,763	+		PFR28_02331	0.48	-0.3
2,784,764	-		PFR28_02331	0.48	+1.0
2,784,764	-		PFR28_02331	0.48	+0.5
2,784,764	-		PFR28_02331	0.48	+0.6
2,784,764	-		PFR28_02331	0.48	-0.3
2,784,890	-		PFR28_02331	0.67	-1.8
2,784,897	+		PFR28_02331	0.68	+0.8
2,784,897	+		PFR28_02331	0.68	-1.5
2,784,897	+		PFR28_02331	0.68	-0.4
2,784,979	+		PFR28_02331	0.80	+0.0
2,784,980	-		PFR28_02331	0.80	-0.4
2,784,980	-		PFR28_02331	0.80	+0.7
2,784,982	+		PFR28_02331	0.80	-2.4
2,784,982	+		PFR28_02331	0.80	-1.6
2,784,982	+		PFR28_02331	0.80	+1.9
2,784,983	-		PFR28_02331	0.80	-1.6
2,784,983	-		PFR28_02331	0.80	-0.3
2,784,983	-		PFR28_02331	0.80	-0.2
2,784,983	-		PFR28_02331	0.80	+1.1
2,784,983	-		PFR28_02331	0.80	-0.7
2,785,068	-				+0.2
2,785,068	-				-0.1
2,785,068	-				+0.2
2,785,162	-				+1.0
2,785,162	-				-2.9
2,785,162	-				-1.3
2,785,359	+		PFR28_02332	0.17	+0.5
2,785,360	-		PFR28_02332	0.17	-0.6
2,785,360	-		PFR28_02332	0.17	+0.8
2,785,360	-		PFR28_02332	0.17	-2.6