Strain Fitness in Pseudomonas sp. RS175 around PFR28_02103

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
2,413,478	+		PFR28_02101	0.42	-0.4
2,413,643	+		PFR28_02101	0.61	-0.3
2,413,896	+				-0.4
2,413,896	+				+1.3
2,413,896	+				+0.2
2,413,896	+				+0.5
2,413,896	+				-0.6
2,413,896	+				-0.3
2,413,896	+				-0.1
2,413,896	+				-0.6
2,413,896	+				+0.6
2,413,896	+				-0.8
2,413,896	+				+0.0
2,413,896	+				-2.6
2,413,896	+				-0.9
2,413,896	+				-1.2
2,413,897	-				-1.0
2,413,897	-				-0.7
2,413,897	-				+1.6
2,413,897	-				+0.2
2,413,900	+				+1.2
2,413,900	+				+0.6
2,413,900	+				+2.6
2,413,900	+				-0.6
2,413,900	+				-0.2
2,413,901	-				-0.1
2,413,901	-				-0.0
2,413,901	-				+0.8
2,413,901	-				-0.0
2,413,901	-				+0.6
2,413,901	-				-0.1
2,413,926	+				+0.6
2,413,926	+				-0.2
2,413,927	-				+0.0
2,413,927	-				+0.3
2,413,928	+				-2.6
2,413,928	+				-0.3
2,413,929	-				-2.0
2,413,929	-				+0.8
2,413,929	-				-0.7
2,413,999	-				-0.7
2,413,999	-				-0.1
2,414,137	+		PFR28_02102	0.27	-0.2
2,414,137	+		PFR28_02102	0.27	+1.6
2,414,138	-		PFR28_02102	0.27	+0.1
2,414,435	+				-1.9
2,414,435	+				+2.9
2,414,435	+				-0.5
2,414,435	+				-1.3
2,414,436	-				-2.6
2,414,436	-				+0.3
2,414,436	-				+1.2
2,414,436	-				-0.7
2,414,436	-				-2.6
2,414,467	-				-0.0
2,414,475	+				-0.4
2,414,538	+		PFR28_02103	0.12	-0.1
2,414,538	+		PFR28_02103	0.12	-2.6
2,414,538	+		PFR28_02103	0.12	-1.4
2,414,538	+		PFR28_02103	0.12	-2.0
2,414,539	-		PFR28_02103	0.13	+0.1
2,414,539	-		PFR28_02103	0.13	-0.5
2,414,539	-		PFR28_02103	0.13	-1.5
2,414,539	-		PFR28_02103	0.13	+0.3
2,414,539	-		PFR28_02103	0.13	-0.2
2,414,781	+		PFR28_02103	0.59	-0.6
2,414,886	+		PFR28_02103	0.79	+0.1
2,414,886	+		PFR28_02103	0.79	-0.4
2,414,887	-		PFR28_02103	0.80	-0.0
2,414,926	-		PFR28_02103	0.87	-0.8
2,414,951	+				-2.0
2,415,010	+				+0.0
2,415,172	-		PFR28_02104	0.33	+0.8
2,415,172	-		PFR28_02104	0.33	-2.1
2,415,265	-		PFR28_02104	0.51	-0.2
2,415,282	+		PFR28_02104	0.54	-0.6
2,415,309	-		PFR28_02104	0.60	-0.1
2,415,309	-		PFR28_02104	0.60	-0.7
2,415,361	+		PFR28_02104	0.70	-0.5
2,415,481	+				+0.0
2,415,481	+				+2.1
2,415,482	-				-1.7
2,415,766	-		PFR28_02105	0.14	-0.0
2,415,906	+		PFR28_02105	0.37	+1.0
2,415,906	+		PFR28_02105	0.37	+0.8
2,415,906	+		PFR28_02105	0.37	-1.4
2,415,907	-		PFR28_02105	0.37	-1.3