Strain Fitness in Pseudomonas sp. RS175 around PFR28_01897

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
2,130,924	+		PFR28_01896	0.56	-0.8
2,130,924	+		PFR28_01896	0.56	-0.8
2,130,924	+		PFR28_01896	0.56	-0.2
2,130,924	+		PFR28_01896	0.56	-0.1
2,130,924	+		PFR28_01896	0.56	+0.2
2,130,924	+		PFR28_01896	0.56	-0.7
2,130,924	+		PFR28_01896	0.56	-1.6
2,130,924	+		PFR28_01896	0.56	+0.5
2,130,925	-		PFR28_01896	0.56	-1.0
2,130,925	-		PFR28_01896	0.56	-0.5
2,130,925	-		PFR28_01896	0.56	+1.8
2,130,925	-		PFR28_01896	0.56	-0.3
2,131,094	-		PFR28_01896	0.64	+1.4
2,131,192	+		PFR28_01896	0.69	-2.4
2,131,192	+		PFR28_01896	0.69	-2.9
2,131,326	+		PFR28_01896	0.76	+0.4
2,131,327	-		PFR28_01896	0.76	-0.3
2,131,386	+		PFR28_01896	0.79	+0.6
2,131,386	+		PFR28_01896	0.79	-0.1
2,131,387	-		PFR28_01896	0.79	+0.2
2,131,387	-		PFR28_01896	0.79	+0.1
2,131,392	+		PFR28_01896	0.79	-1.6
2,131,393	-		PFR28_01896	0.79	-1.4
2,131,393	-		PFR28_01896	0.79	+1.9
2,131,393	-		PFR28_01896	0.79	-2.6
2,131,395	+		PFR28_01896	0.79	-0.2
2,131,395	+		PFR28_01896	0.79	+0.3
2,131,395	+		PFR28_01896	0.79	+1.1
2,131,395	+		PFR28_01896	0.79	+0.5
2,131,395	+		PFR28_01896	0.79	-2.6
2,131,396	-		PFR28_01896	0.79	+2.2
2,131,396	-		PFR28_01896	0.79	+1.3
2,131,396	-		PFR28_01896	0.79	-0.3
2,131,396	-		PFR28_01896	0.79	-1.1
2,131,396	-		PFR28_01896	0.79	+0.2
2,131,431	+		PFR28_01896	0.81	-1.1
2,131,432	-		PFR28_01896	0.81	-1.0
2,131,432	-		PFR28_01896	0.81	-0.5
2,131,432	-		PFR28_01896	0.81	-2.0
2,131,524	-		PFR28_01896	0.85	-0.4
2,131,524	-		PFR28_01896	0.85	+0.9
2,131,524	-		PFR28_01896	0.85	-2.1
2,131,524	-		PFR28_01896	0.85	-2.6
2,131,694	+				-0.3
2,131,725	+				-0.1
2,131,726	-				-1.3
2,131,765	+				+2.2
2,131,765	+				-0.6
2,131,766	-				-0.3
2,131,766	-				-0.5
2,131,885	+				-1.8
2,131,885	+				-0.4
2,131,886	-				-1.0
2,131,886	-				+2.9
2,131,886	-				+2.1
2,131,886	-				+0.2
2,132,016	+		PFR28_01897	0.19	-0.8
2,132,362	+		PFR28_01897	0.57	-0.3
2,132,458	-		PFR28_01897	0.67	-0.5
2,132,466	+		PFR28_01897	0.68	-0.6
2,132,467	-		PFR28_01897	0.68	+0.3
2,132,835	+				+1.0
2,132,835	+				-0.3
2,132,836	-				+0.9
2,132,836	-				+0.6
2,132,950	+		PFR28_01898	0.25	-0.1
2,132,950	+		PFR28_01898	0.25	-1.1
2,132,950	+		PFR28_01898	0.25	-0.2
2,132,950	+		PFR28_01898	0.25	-2.8
2,132,950	+		PFR28_01898	0.25	-2.1
2,132,950	+		PFR28_01898	0.25	+0.6
2,132,951	-		PFR28_01898	0.26	-0.9
2,132,951	-		PFR28_01898	0.26	-2.0
2,132,951	-		PFR28_01898	0.26	-2.3
2,132,951	-		PFR28_01898	0.26	+1.3
2,132,951	-		PFR28_01898	0.26	+1.7
2,133,067	-		PFR28_01898	0.60	-1.5
2,133,154	+		PFR28_01898	0.85	+0.4
2,133,154	+		PFR28_01898	0.85	+0.6
2,133,154	+		PFR28_01898	0.85	+0.8
2,133,154	+		PFR28_01898	0.85	-1.9
2,133,154	+		PFR28_01898	0.85	+0.5
2,133,155	-		PFR28_01898	0.85	+0.3
2,133,155	-		PFR28_01898	0.85	+1.1
2,133,155	-		PFR28_01898	0.85	+0.3
2,133,155	-		PFR28_01898	0.85	-0.6
2,133,155	-		PFR28_01898	0.85	-0.0
2,133,155	-		PFR28_01898	0.85	-1.2
2,133,155	-		PFR28_01898	0.85	-0.4
2,133,155	-		PFR28_01898	0.85	-2.3
2,133,160	+		PFR28_01898	0.87	+1.2
2,133,160	+		PFR28_01898	0.87	-1.3
2,133,160	+		PFR28_01898	0.87	-0.5
2,133,160	+		PFR28_01898	0.87	+0.1
2,133,160	+		PFR28_01898	0.87	+0.6
2,133,161	-		PFR28_01898	0.87	-0.3
2,133,161	-		PFR28_01898	0.87	+0.1
2,133,161	-		PFR28_01898	0.87	+0.2
2,133,203	-				+1.2
2,133,203	-				-0.1
2,133,203	-				-1.3
2,133,426	+				-0.1
2,133,426	+				-0.5
2,133,426	+				+2.2
2,133,426	+				-2.3
2,133,426	+				-1.0
2,133,426	+				+1.3
2,133,426	+				+0.4
2,133,426	+				+0.2
2,133,427	-				-0.5
2,133,427	-				-2.9
2,133,427	-				+1.0
2,133,427	-				-1.3
2,133,427	-				-1.1
2,133,427	-				-0.8
2,133,427	-				+1.4
2,133,427	-				+0.5
2,133,427	-				+0.3
2,133,444	+		PFR28_01899	0.11	-0.0
2,133,445	-		PFR28_01899	0.11	-0.3
2,133,445	-		PFR28_01899	0.11	+0.2
2,133,493	-		PFR28_01899	0.35	-0.1
2,133,584	+		PFR28_01899	0.81	-1.1
2,133,584	+		PFR28_01899	0.81	-0.1
2,133,584	+		PFR28_01899	0.81	-0.4
2,133,584	+		PFR28_01899	0.81	+0.0
2,133,585	-		PFR28_01899	0.82	-2.6
2,133,619	-				+0.8
2,133,629	+				-2.1
2,133,630	-				-0.0
2,133,630	-				+0.0
2,133,753	+				-0.3
2,133,753	+				-0.3
2,133,753	+				+0.6
2,133,753	+				-0.5
2,133,753	+				-0.9
2,133,753	+				+0.6