Strain Fitness in Pseudomonas sp. RS175 around PFR28_01879

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
2,110,874	+		PFR28_01878	0.15	+0.5
2,110,874	+		PFR28_01878	0.15	+0.2
2,110,875	-		PFR28_01878	0.15	+0.9
2,110,875	-		PFR28_01878	0.15	-0.1
2,110,875	-		PFR28_01878	0.15	+1.9
2,111,135	+		PFR28_01878	0.41	-2.1
2,111,135	+		PFR28_01878	0.41	+1.0
2,111,136	-		PFR28_01878	0.41	+0.8
2,111,136	-		PFR28_01878	0.41	-1.3
2,111,136	-		PFR28_01878	0.41	-0.0
2,111,136	-		PFR28_01878	0.41	-1.2
2,111,136	-		PFR28_01878	0.41	+3.2
2,111,136	-		PFR28_01878	0.41	-1.1
2,111,136	-		PFR28_01878	0.41	+1.3
2,111,144	+		PFR28_01878	0.42	-2.0
2,111,145	-		PFR28_01878	0.42	+0.6
2,111,145	-		PFR28_01878	0.42	+0.0
2,111,145	-		PFR28_01878	0.42	-2.0
2,111,145	-		PFR28_01878	0.42	-0.6
2,111,145	-		PFR28_01878	0.42	-0.8
2,111,145	-		PFR28_01878	0.42	+1.7
2,111,396	+		PFR28_01878	0.66	-2.0
2,111,397	-		PFR28_01878	0.66	-0.5
2,111,397	-		PFR28_01878	0.66	+0.0
2,111,426	-		PFR28_01878	0.69	+0.4
2,111,546	+		PFR28_01878	0.81	+0.1
2,111,547	-		PFR28_01878	0.81	+0.6
2,111,547	-		PFR28_01878	0.81	+1.4
2,111,663	+				-0.6
2,111,663	+				-0.1
2,111,663	+				-2.6
2,111,663	+				-0.4
2,111,663	+				+0.9
2,111,664	-				-3.1
2,111,664	-				-1.0
2,111,664	-				-0.9
2,111,664	-				+2.5
2,111,664	-				+0.8
2,111,705	+				-0.7
2,111,706	-				-2.2
2,111,755	-		PFR28_01879	0.18	-1.1
2,111,891	+				-0.5
2,111,892	-				+0.8
2,111,892	-				+0.7
2,111,904	-				-0.8
2,111,921	-				-0.6
2,112,270	-		PFR28_01880	0.20	-1.1
2,112,280	-		PFR28_01880	0.20	-0.8
2,112,447	-		PFR28_01880	0.30	-2.0
2,112,447	-		PFR28_01880	0.30	-0.5
2,112,602	+		PFR28_01880	0.40	-0.2
2,112,602	+		PFR28_01880	0.40	+0.8
2,112,602	+		PFR28_01880	0.40	-0.7
2,112,602	+		PFR28_01880	0.40	-1.2
2,112,602	+		PFR28_01880	0.40	-1.9
2,112,602	+		PFR28_01880	0.40	-1.6
2,112,603	-		PFR28_01880	0.40	-0.8
2,112,603	-		PFR28_01880	0.40	-2.5
2,112,671	+		PFR28_01880	0.44	-0.6
2,112,672	-		PFR28_01880	0.44	+0.1
2,112,672	-		PFR28_01880	0.44	+2.1
2,112,672	-		PFR28_01880	0.44	-0.5
2,112,672	-		PFR28_01880	0.44	-1.3
2,112,680	+		PFR28_01880	0.44	-1.6
2,112,680	+		PFR28_01880	0.44	+1.5
2,112,680	+		PFR28_01880	0.44	-0.7
2,112,680	+		PFR28_01880	0.44	+0.3
2,112,681	-		PFR28_01880	0.45	+0.3
2,112,681	-		PFR28_01880	0.45	+0.9
2,112,681	-		PFR28_01880	0.45	-0.3
2,112,681	-		PFR28_01880	0.45	+1.8
2,112,681	-		PFR28_01880	0.45	-0.2
2,112,728	+		PFR28_01880	0.47	+1.3
2,112,728	+		PFR28_01880	0.47	-0.6
2,112,728	+		PFR28_01880	0.47	+1.3
2,112,729	-		PFR28_01880	0.47	+1.3
2,112,729	-		PFR28_01880	0.47	-1.8
2,112,729	-		PFR28_01880	0.47	-1.5
2,112,777	-		PFR28_01880	0.50	-0.1
2,112,777	-		PFR28_01880	0.50	-1.0
2,112,777	-		PFR28_01880	0.50	-0.5
2,112,777	-		PFR28_01880	0.50	+0.5