Strain Fitness in Pseudomonas sp. RS175 around PFR28_01690

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
1,879,488	+				-0.6
1,879,488	+				+0.2
1,879,489	-				-2.3
1,879,489	-				-3.4
1,879,532	-				-0.4
1,879,555	+				+0.2
1,879,555	+				-0.3
1,879,555	+				-0.2
1,879,556	-				+2.7
1,879,656	-		PFR28_01689	0.17	+0.3
1,879,656	-		PFR28_01689	0.17	-0.0
1,879,656	-		PFR28_01689	0.17	-1.1
1,879,833	+		PFR28_01689	0.39	-0.1
1,879,833	+		PFR28_01689	0.39	-0.2
1,879,833	+		PFR28_01689	0.39	+0.2
1,879,834	-		PFR28_01689	0.39	+0.9
1,879,834	-		PFR28_01689	0.39	-0.9
1,879,918	+		PFR28_01689	0.49	-0.1
1,879,918	+		PFR28_01689	0.49	-2.2
1,879,918	+		PFR28_01689	0.49	+0.8
1,879,918	+		PFR28_01689	0.49	-0.3
1,879,918	+		PFR28_01689	0.49	+0.6
1,879,918	+		PFR28_01689	0.49	+0.4
1,879,918	+		PFR28_01689	0.49	-0.4
1,879,919	-		PFR28_01689	0.49	-0.2
1,879,919	-		PFR28_01689	0.49	+1.2
1,879,919	-		PFR28_01689	0.49	-0.9
1,879,919	-		PFR28_01689	0.49	+0.8
1,879,940	+		PFR28_01689	0.52	-1.0
1,879,941	-		PFR28_01689	0.52	-0.1
1,880,116	-		PFR28_01689	0.73	-0.7
1,880,124	+		PFR28_01689	0.74	+0.1
1,880,125	-		PFR28_01689	0.74	+0.5
1,880,247	+		PFR28_01689	0.88	+0.6
1,880,247	+		PFR28_01689	0.88	-3.8
1,880,248	-		PFR28_01689	0.89	+0.7
1,880,248	-		PFR28_01689	0.89	-0.1
1,880,384	-				+1.3
1,880,384	-				+0.3
1,880,516	+		PFR28_01690	0.38	-0.7
1,880,685	+		PFR28_01690	0.77	-0.1
1,880,685	+		PFR28_01690	0.77	-1.6
1,880,927	-		PFR28_01691	0.40	-2.6
1,881,073	+		PFR28_01691	0.82	-0.1
1,881,073	+		PFR28_01691	0.82	-1.6
1,881,074	-		PFR28_01691	0.82	+1.0
1,881,074	-		PFR28_01691	0.82	+0.3
1,881,074	-		PFR28_01691	0.82	-1.2
1,881,137	+				+2.1
1,881,138	-				+0.1
1,881,138	-				+0.8
1,881,225	+		PFR28_01692	0.10	-0.4
1,881,225	+		PFR28_01692	0.10	+1.3
1,881,226	-		PFR28_01692	0.10	-0.8
1,881,269	+		PFR28_01692	0.15	-2.8
1,881,269	+		PFR28_01692	0.15	+0.7
1,881,269	+		PFR28_01692	0.15	-2.9
1,881,270	-		PFR28_01692	0.15	-0.8
1,881,270	-		PFR28_01692	0.15	+0.3
1,881,309	+		PFR28_01692	0.19	+0.6
1,881,309	+		PFR28_01692	0.19	+0.5
1,881,309	+		PFR28_01692	0.19	-0.1
1,881,309	+		PFR28_01692	0.19	+0.4
1,881,309	+		PFR28_01692	0.19	-0.6
1,881,309	+		PFR28_01692	0.19	+1.3
1,881,310	-		PFR28_01692	0.19	+0.0
1,881,310	-		PFR28_01692	0.19	+1.8
1,881,310	-		PFR28_01692	0.19	+0.4
1,881,323	+		PFR28_01692	0.21	+1.3
1,881,324	-		PFR28_01692	0.21	-1.0