Strain Fitness in Pseudomonas sp. RS175 around PFR28_00980

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
1,061,611	-		PFR28_00979	0.43	-0.2
1,061,640	+		PFR28_00979	0.47	-0.5
1,061,640	+		PFR28_00979	0.47	+0.7
1,061,640	+		PFR28_00979	0.47	-1.7
1,061,640	+		PFR28_00979	0.47	+0.3
1,061,640	+		PFR28_00979	0.47	+0.5
1,061,640	+		PFR28_00979	0.47	+0.5
1,061,640	+		PFR28_00979	0.47	-3.1
1,061,641	-		PFR28_00979	0.47	+0.2
1,061,641	-		PFR28_00979	0.47	+1.2
1,061,641	-		PFR28_00979	0.47	+0.3
1,061,641	-		PFR28_00979	0.47	+0.5
1,061,641	-		PFR28_00979	0.47	-0.1
1,061,641	-		PFR28_00979	0.47	-0.8
1,061,642	+		PFR28_00979	0.47	+0.1
1,061,712	+		PFR28_00979	0.57	+0.4
1,061,712	+		PFR28_00979	0.57	-0.7
1,061,712	+		PFR28_00979	0.57	-0.1
1,061,713	-		PFR28_00979	0.57	+0.8
1,061,713	-		PFR28_00979	0.57	-0.4
1,061,715	-		PFR28_00979	0.57	-0.1
1,061,862	+		PFR28_00979	0.77	+0.7
1,061,862	+		PFR28_00979	0.77	+1.2
1,061,994	+				+0.4
1,061,995	-				-1.1
1,061,995	-				+2.6
1,062,132	+				-0.0
1,062,132	+				-0.1
1,062,132	+				+1.9
1,062,133	-				-0.2
1,062,133	-				+0.4
1,062,163	+				-0.2
1,062,163	+				-0.2
1,062,187	+				-0.3
1,062,187	+				+0.3
1,062,187	+				+1.1
1,062,187	+				-0.0
1,062,187	+				-0.6
1,062,187	+				-1.6
1,062,187	+				-0.0
1,062,188	-				-0.5
1,062,188	-				+0.5
1,062,201	-				-1.4
1,062,201	-				+0.6
1,062,250	+				+0.3
1,062,250	+				-0.0
1,062,250	+				+0.0
1,062,461	+				+0.1
1,063,925	+		PFR28_00980	0.87	-1.3
1,064,175	+				+1.6
1,064,175	+				-0.7
1,064,291	+				-0.2
1,064,291	+				-0.8
1,064,292	-				-1.2
1,064,292	-				-0.1
1,064,292	-				-1.4
1,064,292	-				-2.7
1,064,370	-		PFR28_00981	0.12	-1.6
1,064,557	-		PFR28_00981	0.36	+0.8
1,064,659	+		PFR28_00981	0.50	+1.3
1,064,659	+		PFR28_00981	0.50	+0.3
1,064,659	+		PFR28_00981	0.50	+0.8
1,064,659	+		PFR28_00981	0.50	-1.6
1,064,660	-		PFR28_00981	0.50	-0.2
1,064,660	-		PFR28_00981	0.50	-0.3
1,064,660	-		PFR28_00981	0.50	-0.4
1,064,690	+		PFR28_00981	0.54	+0.7
1,064,690	+		PFR28_00981	0.54	+0.2
1,064,691	-		PFR28_00981	0.54	+1.2
1,064,691	-		PFR28_00981	0.54	+0.6
1,064,819	+		PFR28_00981	0.70	-0.3
1,064,831	+		PFR28_00981	0.72	+1.2
1,064,831	+		PFR28_00981	0.72	-0.9
1,064,832	-		PFR28_00981	0.72	+0.1
1,064,832	-		PFR28_00981	0.72	-0.3
1,065,027	+				+1.3
1,065,028	-				-1.7
1,065,091	+				-0.2
1,065,092	-				+0.7
1,065,092	-				+0.2
1,065,104	+				-1.9
1,065,104	+				+2.1
1,065,104	+				+0.1
1,065,104	+				+1.2
1,065,105	-				-2.8
1,065,105	-				+1.1
1,065,105	-				+0.5
1,065,105	-				-0.2
1,065,107	+				+1.8
1,065,108	-				-0.0
1,065,108	-				+0.7
1,065,109	+				+0.6
1,065,109	+				-1.6
1,065,116	+				+0.9