Experiment: m.b. Chloride 1000 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0319 and Echvi_0320 are separated by 106 nucleotides Echvi_0320 and Echvi_0321 are separated by 169 nucleotides
Echvi_0319: Echvi_0319 - Geranylgeranyl pyrophosphate synthase, at 332,480 to 333,454
_0319
Echvi_0320: Echvi_0320 - Uncharacterized protein conserved in bacteria, at 333,561 to 334,484
_0320
Echvi_0321: Echvi_0321 - Glycerol-3-phosphate O-acyltransferase, at 334,654 to 336,354
_0321
Position (kb) 333
334
335 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 333.475 kb on - strand at 333.478 kb on - strand at 333.478 kb on - strand at 333.488 kb on - strand at 333.488 kb on - strand at 333.523 kb on + strand at 333.524 kb on - strand at 333.524 kb on - strand at 333.524 kb on - strand at 333.736 kb on + strand, within Echvi_0320 at 333.736 kb on + strand, within Echvi_0320 at 333.736 kb on + strand, within Echvi_0320 at 333.736 kb on + strand, within Echvi_0320 at 333.736 kb on + strand, within Echvi_0320 at 333.736 kb on + strand at 333.737 kb on - strand, within Echvi_0320 at 333.737 kb on - strand, within Echvi_0320 at 333.737 kb on - strand, within Echvi_0320 at 333.761 kb on + strand, within Echvi_0320 at 333.761 kb on + strand, within Echvi_0320 at 333.761 kb on + strand, within Echvi_0320 at 333.761 kb on + strand, within Echvi_0320 at 333.772 kb on + strand, within Echvi_0320 at 333.805 kb on + strand, within Echvi_0320 at 333.849 kb on - strand, within Echvi_0320 at 333.872 kb on + strand, within Echvi_0320 at 333.873 kb on - strand, within Echvi_0320 at 333.919 kb on + strand, within Echvi_0320 at 333.920 kb on - strand, within Echvi_0320 at 333.920 kb on - strand, within Echvi_0320 at 334.072 kb on + strand, within Echvi_0320 at 334.072 kb on + strand, within Echvi_0320 at 334.111 kb on - strand, within Echvi_0320 at 334.207 kb on + strand, within Echvi_0320 at 334.295 kb on - strand, within Echvi_0320 at 334.295 kb on - strand, within Echvi_0320 at 334.295 kb on - strand, within Echvi_0320 at 334.295 kb on - strand, within Echvi_0320 at 334.302 kb on - strand, within Echvi_0320 at 334.302 kb on - strand, within Echvi_0320 at 334.302 kb on - strand, within Echvi_0320 at 334.303 kb on + strand, within Echvi_0320 at 334.303 kb on + strand, within Echvi_0320 at 334.307 kb on + strand, within Echvi_0320 at 334.327 kb on + strand, within Echvi_0320 at 334.328 kb on - strand, within Echvi_0320 at 334.328 kb on - strand, within Echvi_0320 at 334.493 kb on + strand at 334.549 kb on - strand at 334.565 kb on + strand at 334.586 kb on - strand at 334.701 kb on + strand at 334.780 kb on - strand at 334.934 kb on + strand, within Echvi_0321 at 335.103 kb on - strand, within Echvi_0321 at 335.117 kb on + strand, within Echvi_0321 at 335.149 kb on + strand, within Echvi_0321 at 335.149 kb on + strand, within Echvi_0321 at 335.308 kb on + strand, within Echvi_0321 at 335.321 kb on + strand, within Echvi_0321 at 335.355 kb on + strand, within Echvi_0321
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 1000 mM remove 333,475 - +0.1 333,478 - -0.2 333,478 - +0.4 333,488 - +0.1 333,488 - -0.7 333,523 + +1.4 333,524 - +0.7 333,524 - -1.7 333,524 - +0.2 333,736 + Echvi_0320 0.19 -1.1 333,736 + Echvi_0320 0.19 -0.2 333,736 + Echvi_0320 0.19 -0.0 333,736 + Echvi_0320 0.19 +0.1 333,736 + Echvi_0320 0.19 +0.0 333,736 + +3.0 333,737 - Echvi_0320 0.19 -1.0 333,737 - Echvi_0320 0.19 -0.1 333,737 - Echvi_0320 0.19 -1.1 333,761 + Echvi_0320 0.22 +0.6 333,761 + Echvi_0320 0.22 -1.0 333,761 + Echvi_0320 0.22 +0.6 333,761 + Echvi_0320 0.22 +0.2 333,772 + Echvi_0320 0.23 +0.0 333,805 + Echvi_0320 0.26 -0.3 333,849 - Echvi_0320 0.31 +0.3 333,872 + Echvi_0320 0.34 -0.3 333,873 - Echvi_0320 0.34 -0.2 333,919 + Echvi_0320 0.39 -0.0 333,920 - Echvi_0320 0.39 -0.2 333,920 - Echvi_0320 0.39 +0.1 334,072 + Echvi_0320 0.55 +0.4 334,072 + Echvi_0320 0.55 -0.2 334,111 - Echvi_0320 0.60 +0.6 334,207 + Echvi_0320 0.70 -0.1 334,295 - Echvi_0320 0.79 +0.4 334,295 - Echvi_0320 0.79 +0.0 334,295 - Echvi_0320 0.79 -0.7 334,295 - Echvi_0320 0.79 -1.3 334,302 - Echvi_0320 0.80 -0.9 334,302 - Echvi_0320 0.80 -1.7 334,302 - Echvi_0320 0.80 -0.7 334,303 + Echvi_0320 0.80 -0.1 334,303 + Echvi_0320 0.80 +0.9 334,307 + Echvi_0320 0.81 -0.5 334,327 + Echvi_0320 0.83 -0.9 334,328 - Echvi_0320 0.83 -0.3 334,328 - Echvi_0320 0.83 +0.5 334,493 + +0.3 334,549 - -0.6 334,565 + +1.7 334,586 - -0.2 334,701 + -0.8 334,780 - +1.0 334,934 + Echvi_0321 0.16 +0.5 335,103 - Echvi_0321 0.26 -1.8 335,117 + Echvi_0321 0.27 +0.5 335,149 + Echvi_0321 0.29 -0.5 335,149 + Echvi_0321 0.29 -0.1 335,308 + Echvi_0321 0.38 +0.5 335,321 + Echvi_0321 0.39 -0.3 335,355 + Echvi_0321 0.41 -0.2
Or see this region's nucleotide sequence