Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4496 and EX28DRAFT_4497 are separated by 139 nucleotides EX28DRAFT_4497 and EX28DRAFT_4498 are separated by 66 nucleotides EX28DRAFT_4498 and EX28DRAFT_4499 are separated by 13 nucleotides
EX28DRAFT_4496: EX28DRAFT_4496 - uridine phosphorylase, at 63,183 to 63,944
_4496
EX28DRAFT_4497: EX28DRAFT_4497 - Uncharacterized protein conserved in bacteria, at 64,084 to 65,541
_4497
EX28DRAFT_4498: EX28DRAFT_4498 - ubiquinone/menaquinone biosynthesis methyltransferases, at 65,608 to 66,363
_4498
EX28DRAFT_4499: EX28DRAFT_4499 - Uncharacterized protein conserved in bacteria, at 66,377 to 66,982
_4499
Position (kb) 64
65
66 Strain fitness (log2 ratio) -2
-1
0
1
2 at 63.122 kb on - strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.182 kb on + strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.183 kb on - strand at 63.188 kb on + strand at 63.300 kb on - strand, within EX28DRAFT_4496 at 63.443 kb on + strand, within EX28DRAFT_4496 at 63.712 kb on + strand, within EX28DRAFT_4496 at 63.713 kb on - strand, within EX28DRAFT_4496 at 63.713 kb on - strand, within EX28DRAFT_4496 at 63.765 kb on + strand, within EX28DRAFT_4496 at 63.852 kb on - strand, within EX28DRAFT_4496 at 63.942 kb on + strand at 63.942 kb on + strand at 63.943 kb on - strand at 64.063 kb on + strand at 64.063 kb on + strand at 64.064 kb on - strand at 64.064 kb on - strand at 64.089 kb on + strand at 64.090 kb on - strand at 64.305 kb on + strand, within EX28DRAFT_4497 at 64.311 kb on + strand, within EX28DRAFT_4497 at 64.311 kb on + strand, within EX28DRAFT_4497 at 64.312 kb on - strand, within EX28DRAFT_4497 at 64.312 kb on - strand, within EX28DRAFT_4497 at 64.312 kb on - strand, within EX28DRAFT_4497 at 64.312 kb on - strand, within EX28DRAFT_4497 at 64.756 kb on + strand, within EX28DRAFT_4497 at 64.757 kb on - strand, within EX28DRAFT_4497 at 64.873 kb on + strand, within EX28DRAFT_4497 at 64.874 kb on - strand, within EX28DRAFT_4497 at 64.874 kb on - strand, within EX28DRAFT_4497 at 64.882 kb on + strand, within EX28DRAFT_4497 at 64.882 kb on + strand, within EX28DRAFT_4497 at 64.882 kb on + strand, within EX28DRAFT_4497 at 64.903 kb on + strand, within EX28DRAFT_4497 at 64.904 kb on - strand, within EX28DRAFT_4497 at 64.953 kb on + strand, within EX28DRAFT_4497 at 64.953 kb on + strand, within EX28DRAFT_4497 at 65.011 kb on + strand, within EX28DRAFT_4497 at 65.012 kb on - strand, within EX28DRAFT_4497 at 65.077 kb on - strand, within EX28DRAFT_4497 at 65.097 kb on + strand, within EX28DRAFT_4497 at 65.098 kb on - strand, within EX28DRAFT_4497 at 65.143 kb on - strand, within EX28DRAFT_4497 at 65.286 kb on + strand, within EX28DRAFT_4497 at 65.388 kb on + strand, within EX28DRAFT_4497 at 65.464 kb on - strand at 65.569 kb on + strand at 66.486 kb on + strand, within EX28DRAFT_4499 at 66.528 kb on + strand, within EX28DRAFT_4499
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 63,122 - +0.4 63,182 + +0.0 63,182 + +0.2 63,182 + -0.6 63,182 + -0.3 63,182 + +0.2 63,183 - +0.7 63,183 - -0.0 63,183 - -0.2 63,183 - -0.4 63,183 - +0.0 63,188 + +1.3 63,300 - EX28DRAFT_4496 0.15 -0.3 63,443 + EX28DRAFT_4496 0.34 -0.3 63,712 + EX28DRAFT_4496 0.69 +1.5 63,713 - EX28DRAFT_4496 0.70 +0.1 63,713 - EX28DRAFT_4496 0.70 -2.7 63,765 + EX28DRAFT_4496 0.76 -0.2 63,852 - EX28DRAFT_4496 0.88 -0.2 63,942 + -0.1 63,942 + -1.9 63,943 - +1.5 64,063 + -0.3 64,063 + -0.0 64,064 - +0.5 64,064 - -0.1 64,089 + +0.4 64,090 - -0.8 64,305 + EX28DRAFT_4497 0.15 +0.7 64,311 + EX28DRAFT_4497 0.16 +0.5 64,311 + EX28DRAFT_4497 0.16 -0.7 64,312 - EX28DRAFT_4497 0.16 -0.1 64,312 - EX28DRAFT_4497 0.16 -0.4 64,312 - EX28DRAFT_4497 0.16 +0.2 64,312 - EX28DRAFT_4497 0.16 +0.6 64,756 + EX28DRAFT_4497 0.46 +0.2 64,757 - EX28DRAFT_4497 0.46 +0.4 64,873 + EX28DRAFT_4497 0.54 +1.0 64,874 - EX28DRAFT_4497 0.54 +0.4 64,874 - EX28DRAFT_4497 0.54 +0.6 64,882 + EX28DRAFT_4497 0.55 -0.2 64,882 + EX28DRAFT_4497 0.55 +0.2 64,882 + EX28DRAFT_4497 0.55 +0.8 64,903 + EX28DRAFT_4497 0.56 +0.4 64,904 - EX28DRAFT_4497 0.56 +0.6 64,953 + EX28DRAFT_4497 0.60 -0.1 64,953 + EX28DRAFT_4497 0.60 +0.9 65,011 + EX28DRAFT_4497 0.64 +0.0 65,012 - EX28DRAFT_4497 0.64 -0.2 65,077 - EX28DRAFT_4497 0.68 +2.1 65,097 + EX28DRAFT_4497 0.69 -0.2 65,098 - EX28DRAFT_4497 0.70 +1.2 65,143 - EX28DRAFT_4497 0.73 +0.6 65,286 + EX28DRAFT_4497 0.82 +0.3 65,388 + EX28DRAFT_4497 0.89 +0.7 65,464 - +0.6 65,569 + +0.7 66,486 + EX28DRAFT_4499 0.18 -0.1 66,528 + EX28DRAFT_4499 0.25 +0.1
Or see this region's nucleotide sequence