Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4425 and EX28DRAFT_4426 are separated by 196 nucleotides EX28DRAFT_4426 and EX28DRAFT_4427 are separated by 9 nucleotides EX28DRAFT_4427 and EX28DRAFT_4428 are separated by 79 nucleotides
EX28DRAFT_4425: EX28DRAFT_4425 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes, at 92,181 to 93,581
_4425
EX28DRAFT_4426: EX28DRAFT_4426 - transcriptional regulator, TetR family, at 93,778 to 94,416
_4426
EX28DRAFT_4427: EX28DRAFT_4427 - Protein of unknown function (DUF1422), at 94,426 to 94,785
_4427
EX28DRAFT_4428: EX28DRAFT_4428 - tRNA (uracil(54)-C(5))-methyltransferase, at 94,865 to 95,977
_4428
Position (kb) 94
95 Strain fitness (log2 ratio) -2
-1
0
1 at 93.465 kb on - strand at 93.465 kb on - strand at 93.549 kb on - strand at 93.603 kb on + strand at 93.651 kb on - strand at 93.651 kb on - strand at 93.651 kb on - strand at 93.693 kb on - strand at 93.693 kb on - strand at 93.726 kb on - strand at 93.741 kb on + strand at 93.742 kb on - strand at 93.743 kb on + strand at 93.743 kb on + strand at 94.193 kb on - strand, within EX28DRAFT_4426 at 94.366 kb on + strand at 94.495 kb on - strand, within EX28DRAFT_4427 at 94.567 kb on + strand, within EX28DRAFT_4427 at 94.655 kb on + strand, within EX28DRAFT_4427 at 94.655 kb on + strand, within EX28DRAFT_4427 at 94.655 kb on + strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.658 kb on - strand, within EX28DRAFT_4427 at 94.658 kb on - strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.660 kb on - strand, within EX28DRAFT_4427 at 94.699 kb on - strand, within EX28DRAFT_4427 at 94.776 kb on - strand at 94.806 kb on + strand at 94.807 kb on - strand at 94.859 kb on + strand at 94.898 kb on - strand at 95.094 kb on + strand, within EX28DRAFT_4428 at 95.217 kb on + strand, within EX28DRAFT_4428 at 95.218 kb on - strand, within EX28DRAFT_4428 at 95.275 kb on + strand, within EX28DRAFT_4428 at 95.424 kb on + strand, within EX28DRAFT_4428 at 95.620 kb on + strand, within EX28DRAFT_4428 at 95.620 kb on + strand, within EX28DRAFT_4428 at 95.621 kb on - strand, within EX28DRAFT_4428 at 95.621 kb on - strand, within EX28DRAFT_4428 at 95.621 kb on - strand, within EX28DRAFT_4428 at 95.621 kb on - strand, within EX28DRAFT_4428
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 93,465 - +0.8 93,465 - -0.7 93,549 - -0.5 93,603 + +0.3 93,651 - -0.2 93,651 - +0.0 93,651 - +0.4 93,693 - +1.5 93,693 - -0.4 93,726 - -0.3 93,741 + +0.0 93,742 - -0.4 93,743 + +0.2 93,743 + -0.1 94,193 - EX28DRAFT_4426 0.65 +0.0 94,366 + +0.1 94,495 - EX28DRAFT_4427 0.19 +0.2 94,567 + EX28DRAFT_4427 0.39 +0.2 94,655 + EX28DRAFT_4427 0.64 -0.0 94,655 + EX28DRAFT_4427 0.64 +0.7 94,655 + EX28DRAFT_4427 0.64 +0.5 94,656 - EX28DRAFT_4427 0.64 +0.9 94,656 - EX28DRAFT_4427 0.64 -1.4 94,656 - EX28DRAFT_4427 0.64 +0.1 94,656 - EX28DRAFT_4427 0.64 +0.8 94,656 - EX28DRAFT_4427 0.64 +0.4 94,656 - EX28DRAFT_4427 0.64 +0.7 94,656 - EX28DRAFT_4427 0.64 +0.1 94,656 - EX28DRAFT_4427 0.64 -0.4 94,656 - EX28DRAFT_4427 0.64 -0.8 94,657 + EX28DRAFT_4427 0.64 +0.5 94,657 + EX28DRAFT_4427 0.64 +0.4 94,657 + EX28DRAFT_4427 0.64 +0.1 94,657 + EX28DRAFT_4427 0.64 -0.5 94,658 - EX28DRAFT_4427 0.64 +0.1 94,658 - EX28DRAFT_4427 0.64 -0.2 94,659 + EX28DRAFT_4427 0.65 +0.4 94,659 + EX28DRAFT_4427 0.65 +0.1 94,659 + EX28DRAFT_4427 0.65 -0.7 94,659 + EX28DRAFT_4427 0.65 +1.0 94,659 + EX28DRAFT_4427 0.65 -1.2 94,659 + EX28DRAFT_4427 0.65 +1.0 94,660 - EX28DRAFT_4427 0.65 +0.3 94,699 - EX28DRAFT_4427 0.76 -0.4 94,776 - -0.0 94,806 + -0.4 94,807 - -0.9 94,859 + +0.8 94,898 - -0.2 95,094 + EX28DRAFT_4428 0.21 -2.0 95,217 + EX28DRAFT_4428 0.32 -0.1 95,218 - EX28DRAFT_4428 0.32 +0.3 95,275 + EX28DRAFT_4428 0.37 +0.1 95,424 + EX28DRAFT_4428 0.50 +0.6 95,620 + EX28DRAFT_4428 0.68 +0.9 95,620 + EX28DRAFT_4428 0.68 +0.6 95,621 - EX28DRAFT_4428 0.68 +0.2 95,621 - EX28DRAFT_4428 0.68 -0.8 95,621 - EX28DRAFT_4428 0.68 -0.6 95,621 - EX28DRAFT_4428 0.68 -1.0
Or see this region's nucleotide sequence