Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4249 and EX28DRAFT_4250 are separated by 217 nucleotides EX28DRAFT_4250 and EX28DRAFT_4251 are separated by 206 nucleotides EX28DRAFT_4251 and EX28DRAFT_4252 are separated by 75 nucleotides
EX28DRAFT_4249: EX28DRAFT_4249 - HAD superfamily (subfamily IIIB) phosphatase, TIGR01672, at 56,294 to 57,007
_4249
EX28DRAFT_4250: EX28DRAFT_4250 - Aspartate/tyrosine/aromatic aminotransferase, at 57,225 to 58,418
_4250
EX28DRAFT_4251: EX28DRAFT_4251 - Protein of unknown function (DUF2589), at 58,625 to 59,182
_4251
EX28DRAFT_4252: EX28DRAFT_4252 - Protein of unknown function (DUF2589), at 59,258 to 59,860
_4252
Position (kb) 57
58
59 Strain fitness (log2 ratio) -2
-1
0
1 at 56.265 kb on - strand at 56.295 kb on + strand at 56.298 kb on + strand at 56.298 kb on + strand at 56.375 kb on + strand, within EX28DRAFT_4249 at 56.376 kb on - strand, within EX28DRAFT_4249 at 56.376 kb on - strand, within EX28DRAFT_4249 at 56.444 kb on + strand, within EX28DRAFT_4249 at 56.445 kb on - strand, within EX28DRAFT_4249 at 56.445 kb on - strand, within EX28DRAFT_4249 at 56.445 kb on - strand, within EX28DRAFT_4249 at 56.518 kb on + strand, within EX28DRAFT_4249 at 56.607 kb on + strand, within EX28DRAFT_4249 at 56.607 kb on + strand, within EX28DRAFT_4249 at 56.607 kb on + strand, within EX28DRAFT_4249 at 56.608 kb on - strand, within EX28DRAFT_4249 at 56.641 kb on + strand, within EX28DRAFT_4249 at 56.725 kb on - strand, within EX28DRAFT_4249 at 56.745 kb on + strand, within EX28DRAFT_4249 at 56.746 kb on - strand, within EX28DRAFT_4249 at 56.956 kb on + strand at 56.957 kb on - strand at 56.969 kb on + strand at 56.969 kb on + strand at 56.970 kb on - strand at 57.050 kb on + strand at 57.227 kb on - strand at 57.293 kb on + strand at 57.294 kb on - strand at 57.294 kb on - strand at 57.367 kb on + strand, within EX28DRAFT_4250 at 57.408 kb on - strand, within EX28DRAFT_4250 at 57.484 kb on - strand, within EX28DRAFT_4250 at 57.484 kb on - strand, within EX28DRAFT_4250 at 57.568 kb on + strand, within EX28DRAFT_4250 at 57.775 kb on + strand, within EX28DRAFT_4250 at 57.816 kb on + strand, within EX28DRAFT_4250 at 57.817 kb on - strand, within EX28DRAFT_4250 at 58.066 kb on + strand, within EX28DRAFT_4250 at 58.067 kb on - strand, within EX28DRAFT_4250 at 58.223 kb on - strand, within EX28DRAFT_4250 at 58.293 kb on - strand, within EX28DRAFT_4250 at 58.309 kb on + strand at 58.309 kb on + strand at 58.313 kb on - strand at 58.313 kb on - strand at 58.325 kb on + strand at 58.325 kb on + strand at 58.383 kb on - strand at 58.461 kb on + strand at 58.462 kb on - strand at 58.462 kb on - strand at 58.514 kb on - strand at 58.552 kb on - strand at 58.640 kb on - strand at 58.651 kb on + strand at 58.675 kb on + strand at 58.676 kb on - strand at 58.676 kb on - strand at 58.676 kb on - strand at 58.676 kb on - strand at 58.733 kb on + strand, within EX28DRAFT_4251 at 58.831 kb on + strand, within EX28DRAFT_4251 at 59.066 kb on - strand, within EX28DRAFT_4251 at 59.089 kb on + strand, within EX28DRAFT_4251 at 59.098 kb on + strand, within EX28DRAFT_4251 at 59.141 kb on + strand at 59.141 kb on + strand at 59.141 kb on + strand at 59.142 kb on - strand at 59.200 kb on + strand at 59.200 kb on + strand at 59.200 kb on + strand at 59.201 kb on - strand at 59.408 kb on - strand, within EX28DRAFT_4252 at 59.408 kb on - strand, within EX28DRAFT_4252
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 56,265 - +0.8 56,295 + -0.8 56,298 + -0.0 56,298 + +0.4 56,375 + EX28DRAFT_4249 0.11 +0.1 56,376 - EX28DRAFT_4249 0.11 +1.2 56,376 - EX28DRAFT_4249 0.11 +0.7 56,444 + EX28DRAFT_4249 0.21 +0.2 56,445 - EX28DRAFT_4249 0.21 -0.1 56,445 - EX28DRAFT_4249 0.21 -0.7 56,445 - EX28DRAFT_4249 0.21 -0.1 56,518 + EX28DRAFT_4249 0.31 -0.4 56,607 + EX28DRAFT_4249 0.44 +0.2 56,607 + EX28DRAFT_4249 0.44 +0.1 56,607 + EX28DRAFT_4249 0.44 +0.2 56,608 - EX28DRAFT_4249 0.44 +0.3 56,641 + EX28DRAFT_4249 0.49 -0.3 56,725 - EX28DRAFT_4249 0.60 +0.1 56,745 + EX28DRAFT_4249 0.63 +0.1 56,746 - EX28DRAFT_4249 0.63 -0.5 56,956 + -0.3 56,957 - -0.0 56,969 + -0.3 56,969 + +0.1 56,970 - -0.0 57,050 + +0.5 57,227 - +0.1 57,293 + -0.5 57,294 - -0.9 57,294 - -0.7 57,367 + EX28DRAFT_4250 0.12 -1.2 57,408 - EX28DRAFT_4250 0.15 +0.1 57,484 - EX28DRAFT_4250 0.22 -0.5 57,484 - EX28DRAFT_4250 0.22 -0.7 57,568 + EX28DRAFT_4250 0.29 -0.4 57,775 + EX28DRAFT_4250 0.46 +0.9 57,816 + EX28DRAFT_4250 0.49 -0.0 57,817 - EX28DRAFT_4250 0.50 -0.5 58,066 + EX28DRAFT_4250 0.70 -0.0 58,067 - EX28DRAFT_4250 0.71 -0.6 58,223 - EX28DRAFT_4250 0.84 +0.2 58,293 - EX28DRAFT_4250 0.89 -0.9 58,309 + +0.3 58,309 + -0.5 58,313 - -0.4 58,313 - +0.3 58,325 + -1.3 58,325 + -0.6 58,383 - -0.3 58,461 + -0.5 58,462 - +0.6 58,462 - +0.8 58,514 - +0.1 58,552 - -2.3 58,640 - +0.1 58,651 + -0.1 58,675 + +0.8 58,676 - +0.5 58,676 - -0.4 58,676 - +0.5 58,676 - -0.1 58,733 + EX28DRAFT_4251 0.19 -0.1 58,831 + EX28DRAFT_4251 0.37 +0.2 59,066 - EX28DRAFT_4251 0.79 -1.2 59,089 + EX28DRAFT_4251 0.83 +0.5 59,098 + EX28DRAFT_4251 0.85 +0.0 59,141 + +0.7 59,141 + -0.4 59,141 + -0.5 59,142 - +0.0 59,200 + +0.2 59,200 + -0.2 59,200 + +0.2 59,201 - +0.8 59,408 - EX28DRAFT_4252 0.25 +0.1 59,408 - EX28DRAFT_4252 0.25 -0.1
Or see this region's nucleotide sequence