Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4134

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4133 and EX28DRAFT_4134 are separated by 30 nucleotidesEX28DRAFT_4134 and EX28DRAFT_4135 are separated by 206 nucleotidesEX28DRAFT_4135 and EX28DRAFT_4136 are separated by 8 nucleotides EX28DRAFT_4133: EX28DRAFT_4133 - ferrous iron transporter FeoB, at 111,703 to 114,021 _4133 EX28DRAFT_4134: EX28DRAFT_4134 - Fe2+ transport system protein A, at 114,052 to 114,279 _4134 EX28DRAFT_4135: EX28DRAFT_4135 - hypothetical protein, at 114,486 to 114,608 _4135 EX28DRAFT_4136: EX28DRAFT_4136 - Transcriptional accessory protein, at 114,617 to 116,947 _4136 Position (kb) 114 115Strain fitness (log2 ratio) -2 -1 0 1 2at 113.059 kb on - strand, within EX28DRAFT_4133at 113.144 kb on + strand, within EX28DRAFT_4133at 113.144 kb on + strand, within EX28DRAFT_4133at 113.145 kb on - strand, within EX28DRAFT_4133at 113.145 kb on - strand, within EX28DRAFT_4133at 113.145 kb on - strand, within EX28DRAFT_4133at 113.381 kb on + strand, within EX28DRAFT_4133at 113.381 kb on + strand, within EX28DRAFT_4133at 113.381 kb on + strand, within EX28DRAFT_4133at 113.381 kb on + strand, within EX28DRAFT_4133at 113.382 kb on - strand, within EX28DRAFT_4133at 113.385 kb on + strand, within EX28DRAFT_4133at 113.714 kb on + strand, within EX28DRAFT_4133at 113.715 kb on - strand, within EX28DRAFT_4133at 113.722 kb on - strand, within EX28DRAFT_4133at 113.781 kb on + strand, within EX28DRAFT_4133at 113.782 kb on - strand, within EX28DRAFT_4133at 113.784 kb on - strand, within EX28DRAFT_4133at 113.902 kb on - strandat 113.986 kb on - strandat 113.998 kb on + strandat 114.007 kb on - strandat 114.076 kb on + strand, within EX28DRAFT_4134at 114.096 kb on + strand, within EX28DRAFT_4134at 114.112 kb on + strand, within EX28DRAFT_4134at 114.307 kb on + strandat 114.308 kb on - strandat 114.312 kb on - strandat 114.352 kb on + strandat 114.381 kb on - strandat 114.383 kb on + strandat 114.465 kb on + strandat 114.503 kb on + strand, within EX28DRAFT_4135at 114.503 kb on + strand, within EX28DRAFT_4135at 114.506 kb on - strand, within EX28DRAFT_4135at 114.910 kb on + strand, within EX28DRAFT_4136at 115.213 kb on + strand, within EX28DRAFT_4136at 115.214 kb on - strand, within EX28DRAFT_4136

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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113,059 - EX28DRAFT_4133 0.58 +0.2
113,144 + EX28DRAFT_4133 0.62 +0.1
113,144 + EX28DRAFT_4133 0.62 -0.5
113,145 - EX28DRAFT_4133 0.62 -0.1
113,145 - EX28DRAFT_4133 0.62 +0.1
113,145 - EX28DRAFT_4133 0.62 -0.0
113,381 + EX28DRAFT_4133 0.72 +0.5
113,381 + EX28DRAFT_4133 0.72 -0.0
113,381 + EX28DRAFT_4133 0.72 +0.3
113,381 + EX28DRAFT_4133 0.72 +0.5
113,382 - EX28DRAFT_4133 0.72 -1.8
113,385 + EX28DRAFT_4133 0.73 -0.5
113,714 + EX28DRAFT_4133 0.87 +0.0
113,715 - EX28DRAFT_4133 0.87 -0.2
113,722 - EX28DRAFT_4133 0.87 +0.2
113,781 + EX28DRAFT_4133 0.90 -0.3
113,782 - EX28DRAFT_4133 0.90 +2.0
113,784 - EX28DRAFT_4133 0.90 +0.5
113,902 - +0.4
113,986 - -1.2
113,998 + +0.8
114,007 - -0.6
114,076 + EX28DRAFT_4134 0.11 +0.4
114,096 + EX28DRAFT_4134 0.19 +0.6
114,112 + EX28DRAFT_4134 0.26 +2.1
114,307 + -0.6
114,308 - +0.5
114,312 - +0.0
114,352 + -1.2
114,381 - +0.7
114,383 + -1.1
114,465 + -0.5
114,503 + EX28DRAFT_4135 0.14 +1.6
114,503 + EX28DRAFT_4135 0.14 +2.2
114,506 - EX28DRAFT_4135 0.16 -0.6
114,910 + EX28DRAFT_4136 0.13 +0.7
115,213 + EX28DRAFT_4136 0.26 +0.4
115,214 - EX28DRAFT_4136 0.26 +0.9

Or see this region's nucleotide sequence