Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3930 and EX28DRAFT_3931 are separated by 148 nucleotides EX28DRAFT_3931 and EX28DRAFT_3932 are separated by 186 nucleotides EX28DRAFT_3932 and EX28DRAFT_3933 are separated by 148 nucleotides
EX28DRAFT_3930: EX28DRAFT_3930 - lipoprotein, YaeC family, at 138,681 to 139,481
_3930
EX28DRAFT_3931: EX28DRAFT_3931 - Predicted acetyltransferase, at 139,630 to 140,049
_3931
EX28DRAFT_3932: EX28DRAFT_3932 - transcriptional regulator, TetR family, at 140,236 to 140,805
_3932
EX28DRAFT_3933: EX28DRAFT_3933 - RND family efflux transporter, MFP subunit, at 140,954 to 142,075
_3933
Position (kb)
140
141 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 139.328 kb on - strand, within EX28DRAFT_3930 at 139.328 kb on - strand, within EX28DRAFT_3930 at 139.397 kb on + strand, within EX28DRAFT_3930 at 139.455 kb on + strand at 139.508 kb on + strand at 139.516 kb on - strand at 139.516 kb on - strand at 139.518 kb on - strand at 139.570 kb on - strand at 139.574 kb on + strand at 139.577 kb on - strand at 139.632 kb on - strand at 139.647 kb on + strand at 139.648 kb on - strand at 139.649 kb on + strand at 139.649 kb on + strand at 139.649 kb on + strand at 139.650 kb on - strand at 139.650 kb on - strand at 139.650 kb on - strand at 139.670 kb on + strand at 139.671 kb on - strand at 139.977 kb on + strand, within EX28DRAFT_3931 at 139.978 kb on - strand, within EX28DRAFT_3931 at 139.980 kb on - strand, within EX28DRAFT_3931 at 139.980 kb on - strand, within EX28DRAFT_3931 at 139.999 kb on + strand, within EX28DRAFT_3931 at 140.024 kb on - strand at 140.028 kb on + strand at 140.028 kb on + strand at 140.029 kb on - strand at 140.029 kb on - strand at 140.050 kb on - strand at 140.050 kb on - strand at 140.050 kb on - strand at 140.061 kb on + strand at 140.152 kb on + strand at 140.668 kb on - strand, within EX28DRAFT_3932 at 140.735 kb on + strand, within EX28DRAFT_3932 at 140.757 kb on - strand at 140.757 kb on - strand at 140.768 kb on - strand at 140.780 kb on + strand at 140.785 kb on - strand at 140.804 kb on - strand at 140.818 kb on - strand at 140.835 kb on - strand at 140.891 kb on - strand at 140.894 kb on + strand at 140.895 kb on - strand at 140.910 kb on + strand at 141.566 kb on + strand, within EX28DRAFT_3933 at 141.567 kb on - strand, within EX28DRAFT_3933 at 141.678 kb on - strand, within EX28DRAFT_3933 at 141.678 kb on - strand, within EX28DRAFT_3933
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 139,328 - EX28DRAFT_3930 0.81 -0.3 139,328 - EX28DRAFT_3930 0.81 +0.9 139,397 + EX28DRAFT_3930 0.89 +0.0 139,455 + -2.7 139,508 + -0.6 139,516 - -0.9 139,516 - -0.2 139,518 - +1.0 139,570 - +0.5 139,574 + +0.6 139,577 - +0.2 139,632 - +0.9 139,647 + +0.7 139,648 - +1.2 139,649 + +0.3 139,649 + +0.3 139,649 + -0.2 139,650 - +1.8 139,650 - +0.0 139,650 - -0.0 139,670 + +0.0 139,671 - +0.1 139,977 + EX28DRAFT_3931 0.83 +0.0 139,978 - EX28DRAFT_3931 0.83 -0.4 139,980 - EX28DRAFT_3931 0.83 +0.1 139,980 - EX28DRAFT_3931 0.83 -0.3 139,999 + EX28DRAFT_3931 0.88 -1.2 140,024 - -0.5 140,028 + -0.2 140,028 + -1.3 140,029 - -0.9 140,029 - +0.1 140,050 - +0.1 140,050 - +0.2 140,050 - +0.7 140,061 + -2.0 140,152 + +0.2 140,668 - EX28DRAFT_3932 0.76 +0.4 140,735 + EX28DRAFT_3932 0.88 +0.4 140,757 - +0.7 140,757 - +0.2 140,768 - +0.4 140,780 + -1.0 140,785 - -0.5 140,804 - +0.0 140,818 - +0.2 140,835 - +0.1 140,891 - -0.5 140,894 + +0.7 140,895 - -0.3 140,910 + -0.3 141,566 + EX28DRAFT_3933 0.55 -0.3 141,567 - EX28DRAFT_3933 0.55 +0.3 141,678 - EX28DRAFT_3933 0.65 +0.3 141,678 - EX28DRAFT_3933 0.65 +0.0
Or see this region's nucleotide sequence