Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3853 and EX28DRAFT_3854 overlap by 4 nucleotides EX28DRAFT_3854 and EX28DRAFT_3855 overlap by 4 nucleotides
EX28DRAFT_3853: EX28DRAFT_3853 - L-lactate transport, at 62,585 to 64,240
_3853
EX28DRAFT_3854: EX28DRAFT_3854 - Transcriptional regulators, at 64,237 to 65,010
_3854
EX28DRAFT_3855: EX28DRAFT_3855 - L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases, at 65,007 to 66,194
_3855
Position (kb)
64
65
66 Strain fitness (log2 ratio)
-2
-1
0
1 at 63.399 kb on + strand, within EX28DRAFT_3853 at 63.404 kb on - strand, within EX28DRAFT_3853 at 63.404 kb on - strand, within EX28DRAFT_3853 at 63.663 kb on - strand, within EX28DRAFT_3853 at 63.790 kb on + strand, within EX28DRAFT_3853 at 63.791 kb on - strand, within EX28DRAFT_3853 at 63.812 kb on + strand, within EX28DRAFT_3853 at 63.855 kb on - strand, within EX28DRAFT_3853 at 64.215 kb on - strand at 64.221 kb on + strand at 64.241 kb on + strand at 64.241 kb on + strand at 64.242 kb on - strand at 64.526 kb on - strand, within EX28DRAFT_3854 at 64.792 kb on + strand, within EX28DRAFT_3854 at 64.793 kb on - strand, within EX28DRAFT_3854 at 64.959 kb on + strand at 64.959 kb on + strand at 64.987 kb on - strand at 65.012 kb on + strand at 65.012 kb on + strand at 65.012 kb on + strand at 65.012 kb on + strand at 65.076 kb on + strand at 65.076 kb on + strand at 65.076 kb on + strand at 65.168 kb on + strand, within EX28DRAFT_3855 at 65.168 kb on + strand, within EX28DRAFT_3855 at 65.245 kb on + strand, within EX28DRAFT_3855 at 65.256 kb on + strand, within EX28DRAFT_3855 at 65.257 kb on - strand, within EX28DRAFT_3855 at 65.257 kb on - strand, within EX28DRAFT_3855 at 65.315 kb on + strand, within EX28DRAFT_3855 at 65.392 kb on - strand, within EX28DRAFT_3855 at 65.415 kb on - strand, within EX28DRAFT_3855 at 65.664 kb on + strand, within EX28DRAFT_3855 at 65.665 kb on - strand, within EX28DRAFT_3855 at 65.957 kb on + strand, within EX28DRAFT_3855 at 65.958 kb on - strand, within EX28DRAFT_3855 at 65.983 kb on + strand, within EX28DRAFT_3855 at 65.984 kb on - strand, within EX28DRAFT_3855 at 66.000 kb on + strand, within EX28DRAFT_3855 at 66.001 kb on - strand, within EX28DRAFT_3855 at 66.001 kb on - strand, within EX28DRAFT_3855
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 63,399 + EX28DRAFT_3853 0.49 -0.4 63,404 - EX28DRAFT_3853 0.49 +0.2 63,404 - EX28DRAFT_3853 0.49 -0.4 63,663 - EX28DRAFT_3853 0.65 -1.0 63,790 + EX28DRAFT_3853 0.73 -1.8 63,791 - EX28DRAFT_3853 0.73 +0.8 63,812 + EX28DRAFT_3853 0.74 +0.2 63,855 - EX28DRAFT_3853 0.77 -0.2 64,215 - -1.0 64,221 + +0.5 64,241 + +0.4 64,241 + +1.0 64,242 - -0.3 64,526 - EX28DRAFT_3854 0.37 +1.4 64,792 + EX28DRAFT_3854 0.72 +0.0 64,793 - EX28DRAFT_3854 0.72 +0.1 64,959 + +0.2 64,959 + -1.0 64,987 - +0.1 65,012 + +0.8 65,012 + -0.3 65,012 + -1.5 65,012 + -1.2 65,076 + -1.0 65,076 + +0.0 65,076 + -0.8 65,168 + EX28DRAFT_3855 0.14 +0.2 65,168 + EX28DRAFT_3855 0.14 -0.2 65,245 + EX28DRAFT_3855 0.20 -0.7 65,256 + EX28DRAFT_3855 0.21 -1.4 65,257 - EX28DRAFT_3855 0.21 -0.3 65,257 - EX28DRAFT_3855 0.21 -0.2 65,315 + EX28DRAFT_3855 0.26 +0.7 65,392 - EX28DRAFT_3855 0.32 +0.9 65,415 - EX28DRAFT_3855 0.34 -0.2 65,664 + EX28DRAFT_3855 0.55 -1.0 65,665 - EX28DRAFT_3855 0.55 +1.1 65,957 + EX28DRAFT_3855 0.80 -0.5 65,958 - EX28DRAFT_3855 0.80 -0.1 65,983 + EX28DRAFT_3855 0.82 +0.7 65,984 - EX28DRAFT_3855 0.82 -0.0 66,000 + EX28DRAFT_3855 0.84 -0.7 66,001 - EX28DRAFT_3855 0.84 +0.2 66,001 - EX28DRAFT_3855 0.84 +0.2
Or see this region's nucleotide sequence