Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_3531

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_3530 and EX28DRAFT_3531 are separated by 44 nucleotidesEX28DRAFT_3531 and EX28DRAFT_3532 overlap by 1 nucleotidesEX28DRAFT_3532 and EX28DRAFT_3533 are separated by 411 nucleotides EX28DRAFT_3530: EX28DRAFT_3530 - NAD-dependent aldehyde dehydrogenases, at 192,822 to 194,192 _3530 EX28DRAFT_3531: EX28DRAFT_3531 - hypothetical protein, at 194,237 to 194,557 _3531 EX28DRAFT_3532: EX28DRAFT_3532 - YfaZ precursor, at 194,557 to 195,102 _3532 EX28DRAFT_3533: EX28DRAFT_3533 - Uncharacterized protein conserved in bacteria, at 195,514 to 196,872 _3533 Position (kb) 194 195Strain fitness (log2 ratio) -2 -1 0 1at 193.499 kb on + strand, within EX28DRAFT_3530at 193.629 kb on - strand, within EX28DRAFT_3530at 193.809 kb on + strand, within EX28DRAFT_3530at 193.809 kb on + strand, within EX28DRAFT_3530at 193.869 kb on - strand, within EX28DRAFT_3530at 193.869 kb on - strand, within EX28DRAFT_3530at 193.869 kb on - strand, within EX28DRAFT_3530at 193.891 kb on - strand, within EX28DRAFT_3530at 193.927 kb on - strand, within EX28DRAFT_3530at 193.977 kb on + strand, within EX28DRAFT_3530at 194.058 kb on + strandat 194.058 kb on + strandat 194.059 kb on - strandat 194.059 kb on - strandat 194.059 kb on - strandat 194.186 kb on + strandat 194.187 kb on - strandat 194.190 kb on + strandat 194.289 kb on - strand, within EX28DRAFT_3531at 194.293 kb on + strand, within EX28DRAFT_3531at 194.293 kb on + strand, within EX28DRAFT_3531at 194.293 kb on + strand, within EX28DRAFT_3531at 194.294 kb on - strand, within EX28DRAFT_3531at 194.329 kb on - strand, within EX28DRAFT_3531at 194.341 kb on + strand, within EX28DRAFT_3531at 194.579 kb on - strandat 194.582 kb on + strandat 194.582 kb on + strandat 194.670 kb on + strand, within EX28DRAFT_3532at 194.670 kb on + strand, within EX28DRAFT_3532at 194.709 kb on - strand, within EX28DRAFT_3532at 194.747 kb on + strand, within EX28DRAFT_3532at 194.748 kb on - strand, within EX28DRAFT_3532at 194.748 kb on - strand, within EX28DRAFT_3532at 194.964 kb on - strand, within EX28DRAFT_3532at 195.107 kb on + strandat 195.296 kb on - strandat 195.417 kb on + strandat 195.419 kb on + strandat 195.419 kb on + strandat 195.419 kb on + strandat 195.419 kb on + strandat 195.420 kb on - strandat 195.420 kb on - strandat 195.497 kb on - strandat 195.497 kb on - strandat 195.507 kb on + strandat 195.513 kb on + strandat 195.514 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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193,499 + EX28DRAFT_3530 0.49 -0.3
193,629 - EX28DRAFT_3530 0.59 -0.6
193,809 + EX28DRAFT_3530 0.72 +0.4
193,809 + EX28DRAFT_3530 0.72 +0.8
193,869 - EX28DRAFT_3530 0.76 -1.6
193,869 - EX28DRAFT_3530 0.76 +0.3
193,869 - EX28DRAFT_3530 0.76 +0.1
193,891 - EX28DRAFT_3530 0.78 +0.2
193,927 - EX28DRAFT_3530 0.81 -0.3
193,977 + EX28DRAFT_3530 0.84 -1.1
194,058 + -0.3
194,058 + -0.2
194,059 - -1.2
194,059 - +0.3
194,059 - +0.5
194,186 + -0.7
194,187 - -2.7
194,190 + +1.3
194,289 - EX28DRAFT_3531 0.16 +1.2
194,293 + EX28DRAFT_3531 0.17 +0.3
194,293 + EX28DRAFT_3531 0.17 +0.2
194,293 + EX28DRAFT_3531 0.17 +0.2
194,294 - EX28DRAFT_3531 0.18 +0.6
194,329 - EX28DRAFT_3531 0.29 +0.4
194,341 + EX28DRAFT_3531 0.32 +0.9
194,579 - +0.2
194,582 + -0.1
194,582 + +0.1
194,670 + EX28DRAFT_3532 0.21 -0.3
194,670 + EX28DRAFT_3532 0.21 +0.9
194,709 - EX28DRAFT_3532 0.28 -1.6
194,747 + EX28DRAFT_3532 0.35 +0.1
194,748 - EX28DRAFT_3532 0.35 -0.6
194,748 - EX28DRAFT_3532 0.35 +0.8
194,964 - EX28DRAFT_3532 0.75 +0.5
195,107 + +1.2
195,296 - +0.2
195,417 + +0.3
195,419 + -2.7
195,419 + +0.2
195,419 + +0.5
195,419 + -0.3
195,420 - +0.3
195,420 - -0.2
195,497 - -0.1
195,497 - -1.5
195,507 + -0.2
195,513 + -1.0
195,514 - +0.3

Or see this region's nucleotide sequence