Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3414 and EX28DRAFT_3415 are separated by 13 nucleotides EX28DRAFT_3415 and EX28DRAFT_3416 overlap by 14 nucleotides
EX28DRAFT_3414: EX28DRAFT_3414 - ABC-type sugar transport system, ATPase component, at 84,684 to 86,186
_3414
EX28DRAFT_3415: EX28DRAFT_3415 - Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components, at 86,200 to 87,222
_3415
EX28DRAFT_3416: EX28DRAFT_3416 - Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components, at 87,209 to 88,210
_3416
Position (kb) 86
87
88 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 85.306 kb on + strand, within EX28DRAFT_3414 at 85.307 kb on - strand, within EX28DRAFT_3414 at 85.307 kb on - strand, within EX28DRAFT_3414 at 85.308 kb on + strand, within EX28DRAFT_3414 at 85.308 kb on + strand, within EX28DRAFT_3414 at 85.308 kb on + strand, within EX28DRAFT_3414 at 85.309 kb on - strand, within EX28DRAFT_3414 at 85.309 kb on - strand, within EX28DRAFT_3414 at 85.309 kb on - strand, within EX28DRAFT_3414 at 85.309 kb on - strand, within EX28DRAFT_3414 at 85.309 kb on - strand, within EX28DRAFT_3414 at 85.309 kb on - strand, within EX28DRAFT_3414 at 85.316 kb on - strand, within EX28DRAFT_3414 at 85.316 kb on - strand, within EX28DRAFT_3414 at 85.661 kb on - strand, within EX28DRAFT_3414 at 85.880 kb on + strand, within EX28DRAFT_3414 at 86.054 kb on + strand at 86.191 kb on + strand at 86.191 kb on + strand at 86.375 kb on + strand, within EX28DRAFT_3415 at 86.375 kb on + strand, within EX28DRAFT_3415 at 86.540 kb on + strand, within EX28DRAFT_3415 at 86.625 kb on - strand, within EX28DRAFT_3415 at 86.625 kb on - strand, within EX28DRAFT_3415 at 86.658 kb on + strand, within EX28DRAFT_3415 at 86.682 kb on + strand, within EX28DRAFT_3415 at 87.214 kb on - strand at 87.220 kb on + strand at 87.221 kb on - strand at 87.225 kb on + strand at 87.343 kb on - strand, within EX28DRAFT_3416 at 87.343 kb on - strand, within EX28DRAFT_3416 at 87.578 kb on - strand, within EX28DRAFT_3416 at 87.602 kb on + strand, within EX28DRAFT_3416 at 87.603 kb on - strand, within EX28DRAFT_3416 at 87.603 kb on - strand, within EX28DRAFT_3416 at 87.603 kb on - strand, within EX28DRAFT_3416 at 87.777 kb on - strand, within EX28DRAFT_3416 at 87.848 kb on + strand, within EX28DRAFT_3416 at 87.848 kb on + strand, within EX28DRAFT_3416 at 87.848 kb on + strand, within EX28DRAFT_3416 at 87.848 kb on + strand, within EX28DRAFT_3416 at 87.848 kb on + strand, within EX28DRAFT_3416 at 87.849 kb on - strand, within EX28DRAFT_3416 at 87.849 kb on - strand, within EX28DRAFT_3416 at 87.849 kb on - strand, within EX28DRAFT_3416 at 87.849 kb on - strand, within EX28DRAFT_3416 at 87.849 kb on - strand, within EX28DRAFT_3416 at 87.849 kb on - strand, within EX28DRAFT_3416 at 87.849 kb on - strand, within EX28DRAFT_3416 at 87.849 kb on - strand, within EX28DRAFT_3416 at 87.849 kb on - strand, within EX28DRAFT_3416 at 87.850 kb on + strand, within EX28DRAFT_3416 at 87.851 kb on - strand, within EX28DRAFT_3416 at 87.901 kb on + strand, within EX28DRAFT_3416 at 87.901 kb on + strand, within EX28DRAFT_3416 at 87.901 kb on + strand, within EX28DRAFT_3416 at 87.942 kb on + strand, within EX28DRAFT_3416 at 88.041 kb on + strand, within EX28DRAFT_3416 at 88.042 kb on - strand, within EX28DRAFT_3416 at 88.049 kb on + strand, within EX28DRAFT_3416 at 88.050 kb on - strand, within EX28DRAFT_3416 at 88.052 kb on - strand, within EX28DRAFT_3416
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 85,306 + EX28DRAFT_3414 0.41 -1.1 85,307 - EX28DRAFT_3414 0.41 +0.4 85,307 - EX28DRAFT_3414 0.41 +1.0 85,308 + EX28DRAFT_3414 0.42 +0.3 85,308 + EX28DRAFT_3414 0.42 -2.5 85,308 + EX28DRAFT_3414 0.42 +0.1 85,309 - EX28DRAFT_3414 0.42 -0.3 85,309 - EX28DRAFT_3414 0.42 +0.2 85,309 - EX28DRAFT_3414 0.42 -0.8 85,309 - EX28DRAFT_3414 0.42 +1.4 85,309 - EX28DRAFT_3414 0.42 +0.9 85,309 - EX28DRAFT_3414 0.42 +0.4 85,316 - EX28DRAFT_3414 0.42 +0.3 85,316 - EX28DRAFT_3414 0.42 -0.8 85,661 - EX28DRAFT_3414 0.65 -0.0 85,880 + EX28DRAFT_3414 0.80 +0.2 86,054 + -1.4 86,191 + -0.3 86,191 + -0.2 86,375 + EX28DRAFT_3415 0.17 -0.4 86,375 + EX28DRAFT_3415 0.17 -0.6 86,540 + EX28DRAFT_3415 0.33 -0.2 86,625 - EX28DRAFT_3415 0.42 -0.6 86,625 - EX28DRAFT_3415 0.42 -1.2 86,658 + EX28DRAFT_3415 0.45 -0.4 86,682 + EX28DRAFT_3415 0.47 -1.2 87,214 - +0.9 87,220 + -0.6 87,221 - -0.9 87,225 + -0.4 87,343 - EX28DRAFT_3416 0.13 +0.4 87,343 - EX28DRAFT_3416 0.13 -0.2 87,578 - EX28DRAFT_3416 0.37 +0.5 87,602 + EX28DRAFT_3416 0.39 -0.9 87,603 - EX28DRAFT_3416 0.39 +0.1 87,603 - EX28DRAFT_3416 0.39 +0.0 87,603 - EX28DRAFT_3416 0.39 +0.6 87,777 - EX28DRAFT_3416 0.57 +1.4 87,848 + EX28DRAFT_3416 0.64 -1.4 87,848 + EX28DRAFT_3416 0.64 +0.3 87,848 + EX28DRAFT_3416 0.64 -1.2 87,848 + EX28DRAFT_3416 0.64 +0.6 87,848 + EX28DRAFT_3416 0.64 +0.1 87,849 - EX28DRAFT_3416 0.64 -0.1 87,849 - EX28DRAFT_3416 0.64 +0.0 87,849 - EX28DRAFT_3416 0.64 -3.1 87,849 - EX28DRAFT_3416 0.64 +0.3 87,849 - EX28DRAFT_3416 0.64 -0.0 87,849 - EX28DRAFT_3416 0.64 +0.7 87,849 - EX28DRAFT_3416 0.64 -0.1 87,849 - EX28DRAFT_3416 0.64 +0.6 87,849 - EX28DRAFT_3416 0.64 +0.2 87,850 + EX28DRAFT_3416 0.64 -0.1 87,851 - EX28DRAFT_3416 0.64 +0.9 87,901 + EX28DRAFT_3416 0.69 +0.0 87,901 + EX28DRAFT_3416 0.69 -0.5 87,901 + EX28DRAFT_3416 0.69 +0.2 87,942 + EX28DRAFT_3416 0.73 -0.1 88,041 + EX28DRAFT_3416 0.83 +0.2 88,042 - EX28DRAFT_3416 0.83 -0.6 88,049 + EX28DRAFT_3416 0.84 +0.2 88,050 - EX28DRAFT_3416 0.84 +0.1 88,052 - EX28DRAFT_3416 0.84 -0.3
Or see this region's nucleotide sequence