Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2572 and EX28DRAFT_2573 are separated by 81 nucleotides EX28DRAFT_2573 and EX28DRAFT_2574 are separated by 409 nucleotides
EX28DRAFT_2572: EX28DRAFT_2572 - Gamma-aminobutyrate permease and related permeases, at 2,605,612 to 2,606,985
_2572
EX28DRAFT_2573: EX28DRAFT_2573 - branched-chain amino acid uptake carrier, at 2,607,067 to 2,608,386
_2573
EX28DRAFT_2574: EX28DRAFT_2574 - phosphate regulon sensor kinase PhoR, at 2,608,796 to 2,610,091
_2574
Position (kb)
2607
2608
2609 Strain fitness (log2 ratio)
-1
0
1
2 at 2606.214 kb on - strand, within EX28DRAFT_2572 at 2606.214 kb on - strand, within EX28DRAFT_2572 at 2606.223 kb on + strand, within EX28DRAFT_2572 at 2606.224 kb on - strand, within EX28DRAFT_2572 at 2606.247 kb on - strand, within EX28DRAFT_2572 at 2606.247 kb on - strand, within EX28DRAFT_2572 at 2606.648 kb on + strand, within EX28DRAFT_2572 at 2606.648 kb on + strand, within EX28DRAFT_2572 at 2606.648 kb on + strand, within EX28DRAFT_2572 at 2606.648 kb on + strand, within EX28DRAFT_2572 at 2606.648 kb on + strand, within EX28DRAFT_2572 at 2606.648 kb on + strand, within EX28DRAFT_2572 at 2606.649 kb on - strand, within EX28DRAFT_2572 at 2606.649 kb on - strand, within EX28DRAFT_2572 at 2606.649 kb on - strand, within EX28DRAFT_2572 at 2606.649 kb on - strand, within EX28DRAFT_2572 at 2606.649 kb on - strand, within EX28DRAFT_2572 at 2606.649 kb on - strand, within EX28DRAFT_2572 at 2606.818 kb on - strand, within EX28DRAFT_2572 at 2606.819 kb on + strand, within EX28DRAFT_2572 at 2606.820 kb on - strand, within EX28DRAFT_2572 at 2606.820 kb on - strand, within EX28DRAFT_2572 at 2606.843 kb on + strand, within EX28DRAFT_2572 at 2606.965 kb on - strand at 2606.974 kb on - strand at 2606.987 kb on + strand at 2606.988 kb on - strand at 2607.114 kb on + strand at 2607.203 kb on - strand, within EX28DRAFT_2573 at 2607.203 kb on - strand, within EX28DRAFT_2573 at 2607.203 kb on - strand, within EX28DRAFT_2573 at 2607.258 kb on + strand, within EX28DRAFT_2573 at 2607.259 kb on - strand, within EX28DRAFT_2573 at 2607.276 kb on + strand, within EX28DRAFT_2573 at 2607.277 kb on - strand, within EX28DRAFT_2573 at 2607.334 kb on - strand, within EX28DRAFT_2573 at 2607.411 kb on + strand, within EX28DRAFT_2573 at 2607.457 kb on + strand, within EX28DRAFT_2573 at 2607.659 kb on + strand, within EX28DRAFT_2573 at 2607.660 kb on - strand, within EX28DRAFT_2573 at 2607.707 kb on + strand, within EX28DRAFT_2573 at 2607.806 kb on + strand, within EX28DRAFT_2573 at 2607.807 kb on - strand, within EX28DRAFT_2573 at 2607.846 kb on - strand, within EX28DRAFT_2573 at 2608.001 kb on + strand, within EX28DRAFT_2573 at 2608.002 kb on - strand, within EX28DRAFT_2573 at 2608.013 kb on + strand, within EX28DRAFT_2573 at 2608.013 kb on + strand, within EX28DRAFT_2573 at 2608.283 kb on - strand at 2608.342 kb on - strand at 2608.342 kb on - strand at 2608.373 kb on - strand at 2608.387 kb on - strand at 2608.537 kb on + strand at 2608.578 kb on + strand at 2608.777 kb on + strand at 2608.817 kb on + strand at 2608.996 kb on + strand, within EX28DRAFT_2574 at 2608.997 kb on - strand, within EX28DRAFT_2574 at 2609.036 kb on - strand, within EX28DRAFT_2574 at 2609.096 kb on - strand, within EX28DRAFT_2574 at 2609.112 kb on + strand, within EX28DRAFT_2574 at 2609.112 kb on + strand, within EX28DRAFT_2574 at 2609.112 kb on + strand, within EX28DRAFT_2574 at 2609.112 kb on + strand, within EX28DRAFT_2574 at 2609.112 kb on + strand, within EX28DRAFT_2574 at 2609.113 kb on - strand, within EX28DRAFT_2574 at 2609.171 kb on - strand, within EX28DRAFT_2574
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,606,214 - EX28DRAFT_2572 0.44 +0.6 2,606,214 - EX28DRAFT_2572 0.44 +0.2 2,606,223 + EX28DRAFT_2572 0.44 -0.1 2,606,224 - EX28DRAFT_2572 0.45 -1.2 2,606,247 - EX28DRAFT_2572 0.46 +0.0 2,606,247 - EX28DRAFT_2572 0.46 -1.4 2,606,648 + EX28DRAFT_2572 0.75 +0.3 2,606,648 + EX28DRAFT_2572 0.75 +1.4 2,606,648 + EX28DRAFT_2572 0.75 +0.5 2,606,648 + EX28DRAFT_2572 0.75 +0.1 2,606,648 + EX28DRAFT_2572 0.75 -0.8 2,606,648 + EX28DRAFT_2572 0.75 +0.3 2,606,649 - EX28DRAFT_2572 0.75 +0.7 2,606,649 - EX28DRAFT_2572 0.75 +2.5 2,606,649 - EX28DRAFT_2572 0.75 +0.8 2,606,649 - EX28DRAFT_2572 0.75 -0.7 2,606,649 - EX28DRAFT_2572 0.75 +0.6 2,606,649 - EX28DRAFT_2572 0.75 +0.4 2,606,818 - EX28DRAFT_2572 0.88 +1.0 2,606,819 + EX28DRAFT_2572 0.88 +0.3 2,606,820 - EX28DRAFT_2572 0.88 -0.9 2,606,820 - EX28DRAFT_2572 0.88 -0.1 2,606,843 + EX28DRAFT_2572 0.90 -0.1 2,606,965 - -0.0 2,606,974 - -0.9 2,606,987 + -0.0 2,606,988 - +0.1 2,607,114 + -0.2 2,607,203 - EX28DRAFT_2573 0.10 -0.5 2,607,203 - EX28DRAFT_2573 0.10 -0.7 2,607,203 - EX28DRAFT_2573 0.10 +0.3 2,607,258 + EX28DRAFT_2573 0.14 +0.5 2,607,259 - EX28DRAFT_2573 0.15 -0.2 2,607,276 + EX28DRAFT_2573 0.16 +0.7 2,607,277 - EX28DRAFT_2573 0.16 -0.3 2,607,334 - EX28DRAFT_2573 0.20 -0.0 2,607,411 + EX28DRAFT_2573 0.26 +0.2 2,607,457 + EX28DRAFT_2573 0.30 +0.2 2,607,659 + EX28DRAFT_2573 0.45 +0.4 2,607,660 - EX28DRAFT_2573 0.45 +1.0 2,607,707 + EX28DRAFT_2573 0.48 -0.1 2,607,806 + EX28DRAFT_2573 0.56 +0.1 2,607,807 - EX28DRAFT_2573 0.56 +0.7 2,607,846 - EX28DRAFT_2573 0.59 -0.8 2,608,001 + EX28DRAFT_2573 0.71 -0.3 2,608,002 - EX28DRAFT_2573 0.71 +0.4 2,608,013 + EX28DRAFT_2573 0.72 +0.2 2,608,013 + EX28DRAFT_2573 0.72 +0.9 2,608,283 - +0.8 2,608,342 - +0.5 2,608,342 - -0.1 2,608,373 - +2.3 2,608,387 - +0.3 2,608,537 + +0.5 2,608,578 + +0.6 2,608,777 + -0.8 2,608,817 + -0.4 2,608,996 + EX28DRAFT_2574 0.15 -0.3 2,608,997 - EX28DRAFT_2574 0.16 +0.2 2,609,036 - EX28DRAFT_2574 0.19 -0.0 2,609,096 - EX28DRAFT_2574 0.23 +0.2 2,609,112 + EX28DRAFT_2574 0.24 +0.0 2,609,112 + EX28DRAFT_2574 0.24 -0.4 2,609,112 + EX28DRAFT_2574 0.24 +2.0 2,609,112 + EX28DRAFT_2574 0.24 +0.5 2,609,112 + EX28DRAFT_2574 0.24 -0.4 2,609,113 - EX28DRAFT_2574 0.24 -0.2 2,609,171 - EX28DRAFT_2574 0.29 -0.4
Or see this region's nucleotide sequence