Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2283 and EX28DRAFT_2284 overlap by 4 nucleotides EX28DRAFT_2284 and EX28DRAFT_2285 are separated by 638 nucleotides
EX28DRAFT_2283: EX28DRAFT_2283 - Osmosensitive K+ channel histidine kinase, at 2,307,651 to 2,310,338
_2283
EX28DRAFT_2284: EX28DRAFT_2284 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 2,310,335 to 2,311,012
_2284
EX28DRAFT_2285: EX28DRAFT_2285 - ornithine decarboxylase SpeF, at 2,311,651 to 2,313,849
_2285
Position (kb)
2310
2311
2312 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2309.790 kb on - strand, within EX28DRAFT_2283 at 2309.819 kb on + strand, within EX28DRAFT_2283 at 2309.931 kb on - strand, within EX28DRAFT_2283 at 2309.962 kb on + strand, within EX28DRAFT_2283 at 2310.028 kb on - strand, within EX28DRAFT_2283 at 2310.028 kb on - strand, within EX28DRAFT_2283 at 2310.137 kb on + strand at 2310.322 kb on + strand at 2310.322 kb on + strand at 2310.373 kb on + strand at 2310.448 kb on - strand, within EX28DRAFT_2284 at 2310.450 kb on + strand, within EX28DRAFT_2284 at 2310.450 kb on + strand, within EX28DRAFT_2284 at 2310.450 kb on + strand, within EX28DRAFT_2284 at 2310.451 kb on - strand, within EX28DRAFT_2284 at 2310.864 kb on + strand, within EX28DRAFT_2284 at 2310.865 kb on - strand, within EX28DRAFT_2284 at 2310.915 kb on + strand, within EX28DRAFT_2284 at 2310.916 kb on - strand, within EX28DRAFT_2284 at 2310.916 kb on - strand, within EX28DRAFT_2284 at 2310.918 kb on - strand, within EX28DRAFT_2284 at 2310.918 kb on - strand, within EX28DRAFT_2284 at 2310.919 kb on + strand, within EX28DRAFT_2284 at 2310.919 kb on + strand, within EX28DRAFT_2284 at 2310.919 kb on + strand, within EX28DRAFT_2284 at 2310.919 kb on + strand, within EX28DRAFT_2284 at 2310.972 kb on + strand at 2311.119 kb on - strand at 2311.321 kb on + strand at 2311.322 kb on - strand at 2311.445 kb on - strand at 2311.698 kb on + strand at 2311.802 kb on + strand at 2311.870 kb on + strand at 2311.871 kb on - strand, within EX28DRAFT_2285 at 2311.900 kb on + strand, within EX28DRAFT_2285 at 2312.002 kb on + strand, within EX28DRAFT_2285 at 2312.002 kb on + strand, within EX28DRAFT_2285
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,309,790 - EX28DRAFT_2283 0.80 -0.3 2,309,819 + EX28DRAFT_2283 0.81 +0.1 2,309,931 - EX28DRAFT_2283 0.85 +0.1 2,309,962 + EX28DRAFT_2283 0.86 +0.0 2,310,028 - EX28DRAFT_2283 0.88 -3.2 2,310,028 - EX28DRAFT_2283 0.88 -0.1 2,310,137 + +0.6 2,310,322 + +0.8 2,310,322 + -1.0 2,310,373 + -0.2 2,310,448 - EX28DRAFT_2284 0.17 +0.3 2,310,450 + EX28DRAFT_2284 0.17 +1.0 2,310,450 + EX28DRAFT_2284 0.17 +0.9 2,310,450 + EX28DRAFT_2284 0.17 +0.8 2,310,451 - EX28DRAFT_2284 0.17 -0.0 2,310,864 + EX28DRAFT_2284 0.78 +0.1 2,310,865 - EX28DRAFT_2284 0.78 +0.4 2,310,915 + EX28DRAFT_2284 0.86 +0.1 2,310,916 - EX28DRAFT_2284 0.86 +0.4 2,310,916 - EX28DRAFT_2284 0.86 +0.5 2,310,918 - EX28DRAFT_2284 0.86 +0.4 2,310,918 - EX28DRAFT_2284 0.86 +0.3 2,310,919 + EX28DRAFT_2284 0.86 -0.2 2,310,919 + EX28DRAFT_2284 0.86 -0.3 2,310,919 + EX28DRAFT_2284 0.86 +1.1 2,310,919 + EX28DRAFT_2284 0.86 +0.3 2,310,972 + +0.1 2,311,119 - +0.3 2,311,321 + -0.6 2,311,322 - -0.9 2,311,445 - +0.4 2,311,698 + +0.5 2,311,802 + +0.6 2,311,870 + -0.1 2,311,871 - EX28DRAFT_2285 0.10 +0.2 2,311,900 + EX28DRAFT_2285 0.11 -0.2 2,312,002 + EX28DRAFT_2285 0.16 +0.2 2,312,002 + EX28DRAFT_2285 0.16 -0.4
Or see this region's nucleotide sequence