Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2241 and EX28DRAFT_2242 are separated by 303 nucleotides EX28DRAFT_2242 and EX28DRAFT_2243 are separated by 105 nucleotides EX28DRAFT_2243 and EX28DRAFT_2244 overlap by 4 nucleotides EX28DRAFT_2244 and EX28DRAFT_2245 are separated by 22 nucleotides
EX28DRAFT_2241: EX28DRAFT_2241 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54), at 2,264,963 to 2,266,015
_2241
EX28DRAFT_2242: EX28DRAFT_2242 - YbgS-like protein, at 2,266,319 to 2,266,699
_2242
EX28DRAFT_2243: EX28DRAFT_2243 - cation diffusion facilitator family transporter, at 2,266,805 to 2,267,743
_2243
EX28DRAFT_2244: EX28DRAFT_2244 - nicotinamide mononucleotide transporter PnuC, at 2,267,740 to 2,268,459
_2244
EX28DRAFT_2245: EX28DRAFT_2245 - quinolinate synthetase (EC 2.5.1.72), at 2,268,482 to 2,269,525
_2245
Position (kb)
2266
2267
2268 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2265.869 kb on - strand, within EX28DRAFT_2241 at 2265.883 kb on + strand, within EX28DRAFT_2241 at 2265.883 kb on + strand, within EX28DRAFT_2241 at 2265.913 kb on + strand at 2266.036 kb on - strand at 2266.041 kb on + strand at 2266.042 kb on - strand at 2266.068 kb on - strand at 2266.474 kb on + strand, within EX28DRAFT_2242 at 2266.487 kb on - strand, within EX28DRAFT_2242 at 2266.487 kb on - strand, within EX28DRAFT_2242 at 2266.519 kb on + strand, within EX28DRAFT_2242 at 2266.519 kb on + strand, within EX28DRAFT_2242 at 2266.520 kb on - strand, within EX28DRAFT_2242 at 2266.585 kb on + strand, within EX28DRAFT_2242 at 2266.585 kb on + strand, within EX28DRAFT_2242 at 2266.585 kb on + strand, within EX28DRAFT_2242 at 2266.585 kb on + strand, within EX28DRAFT_2242 at 2266.585 kb on + strand, within EX28DRAFT_2242 at 2266.585 kb on + strand, within EX28DRAFT_2242 at 2266.606 kb on + strand, within EX28DRAFT_2242 at 2266.606 kb on + strand, within EX28DRAFT_2242 at 2266.656 kb on + strand, within EX28DRAFT_2242 at 2266.656 kb on + strand, within EX28DRAFT_2242 at 2266.657 kb on - strand, within EX28DRAFT_2242 at 2266.675 kb on + strand at 2266.675 kb on + strand at 2266.759 kb on - strand at 2266.762 kb on - strand at 2267.036 kb on - strand, within EX28DRAFT_2243 at 2267.111 kb on - strand, within EX28DRAFT_2243 at 2267.636 kb on + strand, within EX28DRAFT_2243 at 2267.636 kb on + strand, within EX28DRAFT_2243 at 2267.669 kb on + strand at 2267.670 kb on - strand at 2267.781 kb on + strand at 2267.828 kb on + strand, within EX28DRAFT_2244 at 2267.918 kb on + strand, within EX28DRAFT_2244 at 2267.919 kb on - strand, within EX28DRAFT_2244 at 2268.081 kb on + strand, within EX28DRAFT_2244 at 2268.081 kb on + strand, within EX28DRAFT_2244 at 2268.082 kb on - strand, within EX28DRAFT_2244 at 2268.083 kb on + strand, within EX28DRAFT_2244 at 2268.083 kb on + strand, within EX28DRAFT_2244 at 2268.083 kb on + strand, within EX28DRAFT_2244 at 2268.083 kb on + strand, within EX28DRAFT_2244 at 2268.083 kb on + strand, within EX28DRAFT_2244 at 2268.083 kb on + strand, within EX28DRAFT_2244 at 2268.083 kb on + strand, within EX28DRAFT_2244 at 2268.083 kb on + strand, within EX28DRAFT_2244 at 2268.095 kb on - strand, within EX28DRAFT_2244 at 2268.213 kb on - strand, within EX28DRAFT_2244 at 2268.258 kb on - strand, within EX28DRAFT_2244 at 2268.352 kb on - strand, within EX28DRAFT_2244 at 2268.422 kb on - strand at 2268.422 kb on - strand at 2268.423 kb on + strand at 2268.423 kb on + strand at 2268.424 kb on - strand at 2268.424 kb on - strand at 2268.483 kb on + strand at 2268.483 kb on + strand at 2268.483 kb on + strand at 2268.487 kb on + strand at 2268.487 kb on + strand at 2268.487 kb on + strand at 2268.487 kb on + strand at 2268.487 kb on + strand at 2268.488 kb on - strand at 2268.492 kb on - strand at 2268.531 kb on - strand at 2268.724 kb on - strand, within EX28DRAFT_2245
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,265,869 - EX28DRAFT_2241 0.86 +0.0 2,265,883 + EX28DRAFT_2241 0.87 +0.0 2,265,883 + EX28DRAFT_2241 0.87 +1.8 2,265,913 + -0.5 2,266,036 - -0.4 2,266,041 + -0.1 2,266,042 - +0.5 2,266,068 - -0.2 2,266,474 + EX28DRAFT_2242 0.41 -0.1 2,266,487 - EX28DRAFT_2242 0.44 +2.1 2,266,487 - EX28DRAFT_2242 0.44 +0.1 2,266,519 + EX28DRAFT_2242 0.52 -0.5 2,266,519 + EX28DRAFT_2242 0.52 -1.6 2,266,520 - EX28DRAFT_2242 0.53 +0.5 2,266,585 + EX28DRAFT_2242 0.70 -0.3 2,266,585 + EX28DRAFT_2242 0.70 +0.2 2,266,585 + EX28DRAFT_2242 0.70 +0.7 2,266,585 + EX28DRAFT_2242 0.70 -2.1 2,266,585 + EX28DRAFT_2242 0.70 +0.3 2,266,585 + EX28DRAFT_2242 0.70 -1.0 2,266,606 + EX28DRAFT_2242 0.75 +0.0 2,266,606 + EX28DRAFT_2242 0.75 +0.8 2,266,656 + EX28DRAFT_2242 0.88 +0.2 2,266,656 + EX28DRAFT_2242 0.88 +1.0 2,266,657 - EX28DRAFT_2242 0.89 +0.6 2,266,675 + +0.3 2,266,675 + -0.1 2,266,759 - +0.1 2,266,762 - -0.3 2,267,036 - EX28DRAFT_2243 0.25 +0.8 2,267,111 - EX28DRAFT_2243 0.33 +1.7 2,267,636 + EX28DRAFT_2243 0.88 +0.7 2,267,636 + EX28DRAFT_2243 0.88 +0.6 2,267,669 + +0.1 2,267,670 - +0.4 2,267,781 + +0.0 2,267,828 + EX28DRAFT_2244 0.12 -1.0 2,267,918 + EX28DRAFT_2244 0.25 -0.7 2,267,919 - EX28DRAFT_2244 0.25 +0.3 2,268,081 + EX28DRAFT_2244 0.47 +0.8 2,268,081 + EX28DRAFT_2244 0.47 +0.2 2,268,082 - EX28DRAFT_2244 0.47 -0.1 2,268,083 + EX28DRAFT_2244 0.48 +0.4 2,268,083 + EX28DRAFT_2244 0.48 -0.0 2,268,083 + EX28DRAFT_2244 0.48 -1.4 2,268,083 + EX28DRAFT_2244 0.48 +0.4 2,268,083 + EX28DRAFT_2244 0.48 -0.6 2,268,083 + EX28DRAFT_2244 0.48 +0.2 2,268,083 + EX28DRAFT_2244 0.48 +0.4 2,268,083 + EX28DRAFT_2244 0.48 -0.0 2,268,095 - EX28DRAFT_2244 0.49 -0.3 2,268,213 - EX28DRAFT_2244 0.66 +0.8 2,268,258 - EX28DRAFT_2244 0.72 +0.2 2,268,352 - EX28DRAFT_2244 0.85 +0.5 2,268,422 - -0.2 2,268,422 - -0.1 2,268,423 + +0.5 2,268,423 + -0.4 2,268,424 - +0.8 2,268,424 - -1.5 2,268,483 + -0.8 2,268,483 + -0.4 2,268,483 + -0.0 2,268,487 + -0.8 2,268,487 + -0.3 2,268,487 + -0.2 2,268,487 + -0.3 2,268,487 + -1.2 2,268,488 - +1.4 2,268,492 - -0.1 2,268,531 - -0.6 2,268,724 - EX28DRAFT_2245 0.23 -2.7
Or see this region's nucleotide sequence