Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_1755

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_1753 and EX28DRAFT_1754 are separated by 6 nucleotidesEX28DRAFT_1754 and EX28DRAFT_1755 are separated by 6 nucleotidesEX28DRAFT_1755 and EX28DRAFT_1756 overlap by 28 nucleotides EX28DRAFT_1753: EX28DRAFT_1753 - exodeoxyribonuclease III, at 1,768,728 to 1,769,534 _1753 EX28DRAFT_1754: EX28DRAFT_1754 - Uncharacterized conserved protein, at 1,769,541 to 1,770,224 _1754 EX28DRAFT_1755: EX28DRAFT_1755 - ABC-type uncharacterized transport system, periplasmic component, at 1,770,231 to 1,771,400 _1755 EX28DRAFT_1756: EX28DRAFT_1756 - ABC-type uncharacterized transport system, permease component, at 1,771,373 to 1,772,902 _1756 Position (kb) 1770 1771 1772Strain fitness (log2 ratio) -2 -1 0 1 2at 1769.319 kb on - strand, within EX28DRAFT_1753at 1769.533 kb on - strandat 1769.533 kb on - strandat 1769.564 kb on - strandat 1769.588 kb on + strandat 1769.588 kb on + strandat 1769.639 kb on + strand, within EX28DRAFT_1754at 1769.640 kb on - strand, within EX28DRAFT_1754at 1769.668 kb on - strand, within EX28DRAFT_1754at 1769.715 kb on + strand, within EX28DRAFT_1754at 1769.716 kb on - strand, within EX28DRAFT_1754at 1769.716 kb on - strand, within EX28DRAFT_1754at 1769.716 kb on - strand, within EX28DRAFT_1754at 1770.022 kb on + strand, within EX28DRAFT_1754at 1770.023 kb on - strand, within EX28DRAFT_1754at 1770.023 kb on - strand, within EX28DRAFT_1754at 1770.023 kb on - strand, within EX28DRAFT_1754at 1770.024 kb on + strand, within EX28DRAFT_1754at 1770.143 kb on - strand, within EX28DRAFT_1754at 1770.152 kb on + strand, within EX28DRAFT_1754at 1770.158 kb on - strandat 1770.158 kb on - strandat 1770.215 kb on + strandat 1770.230 kb on + strandat 1770.500 kb on + strand, within EX28DRAFT_1755at 1770.810 kb on - strand, within EX28DRAFT_1755at 1771.089 kb on + strand, within EX28DRAFT_1755at 1771.090 kb on - strand, within EX28DRAFT_1755at 1771.090 kb on - strand, within EX28DRAFT_1755at 1771.433 kb on + strandat 1772.111 kb on - strand, within EX28DRAFT_1756

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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1,769,319 - EX28DRAFT_1753 0.73 -0.4
1,769,533 - -0.1
1,769,533 - +0.7
1,769,564 - -0.6
1,769,588 + +1.8
1,769,588 + -1.8
1,769,639 + EX28DRAFT_1754 0.14 -0.5
1,769,640 - EX28DRAFT_1754 0.14 -0.7
1,769,668 - EX28DRAFT_1754 0.19 +0.1
1,769,715 + EX28DRAFT_1754 0.25 +1.2
1,769,716 - EX28DRAFT_1754 0.26 -0.5
1,769,716 - EX28DRAFT_1754 0.26 -0.3
1,769,716 - EX28DRAFT_1754 0.26 +0.4
1,770,022 + EX28DRAFT_1754 0.70 +0.6
1,770,023 - EX28DRAFT_1754 0.70 +1.2
1,770,023 - EX28DRAFT_1754 0.70 +0.0
1,770,023 - EX28DRAFT_1754 0.70 +0.5
1,770,024 + EX28DRAFT_1754 0.71 +0.9
1,770,143 - EX28DRAFT_1754 0.88 -0.2
1,770,152 + EX28DRAFT_1754 0.89 -1.0
1,770,158 - -0.1
1,770,158 - +0.1
1,770,215 + +0.2
1,770,230 + -0.6
1,770,500 + EX28DRAFT_1755 0.23 +0.8
1,770,810 - EX28DRAFT_1755 0.49 -0.9
1,771,089 + EX28DRAFT_1755 0.73 +0.4
1,771,090 - EX28DRAFT_1755 0.73 +0.3
1,771,090 - EX28DRAFT_1755 0.73 -0.6
1,771,433 + -0.7
1,772,111 - EX28DRAFT_1756 0.48 -1.1

Or see this region's nucleotide sequence