Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1626 and EX28DRAFT_1627 are separated by 10 nucleotides EX28DRAFT_1627 and EX28DRAFT_1628 are separated by 2 nucleotides EX28DRAFT_1628 and EX28DRAFT_1629 overlap by 4 nucleotides
EX28DRAFT_1626: EX28DRAFT_1626 - electron transport complex, RnfABCDGE type, D subunit, at 1,644,045 to 1,645,097
_1626
EX28DRAFT_1627: EX28DRAFT_1627 - electron transport complex, RnfABCDGE type, G subunit, at 1,645,108 to 1,645,728
_1627
EX28DRAFT_1628: EX28DRAFT_1628 - electron transport complex, RnfABCDGE type, E subunit, at 1,645,731 to 1,646,417
_1628
EX28DRAFT_1629: EX28DRAFT_1629 - DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)/endonuclease III (EC 3.2.2.-), at 1,646,414 to 1,647,049
_1629
Position (kb)
1645
1646
1647 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1644.887 kb on - strand, within EX28DRAFT_1626 at 1644.887 kb on - strand, within EX28DRAFT_1626 at 1645.063 kb on - strand at 1645.112 kb on + strand at 1645.752 kb on - strand at 1646.335 kb on + strand, within EX28DRAFT_1628 at 1646.361 kb on - strand at 1646.619 kb on + strand, within EX28DRAFT_1629 at 1646.619 kb on + strand, within EX28DRAFT_1629 at 1646.636 kb on + strand, within EX28DRAFT_1629 at 1646.724 kb on + strand, within EX28DRAFT_1629 at 1646.725 kb on - strand, within EX28DRAFT_1629 at 1646.834 kb on - strand, within EX28DRAFT_1629 at 1646.834 kb on - strand, within EX28DRAFT_1629 at 1646.834 kb on - strand, within EX28DRAFT_1629 at 1646.857 kb on + strand, within EX28DRAFT_1629 at 1646.858 kb on - strand, within EX28DRAFT_1629 at 1646.904 kb on + strand, within EX28DRAFT_1629 at 1646.926 kb on + strand, within EX28DRAFT_1629 at 1646.966 kb on + strand, within EX28DRAFT_1629 at 1646.969 kb on - strand, within EX28DRAFT_1629 at 1646.969 kb on - strand, within EX28DRAFT_1629 at 1646.969 kb on - strand, within EX28DRAFT_1629 at 1647.105 kb on - strand at 1647.105 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,644,887 - EX28DRAFT_1626 0.80 -0.6 1,644,887 - EX28DRAFT_1626 0.80 -0.4 1,645,063 - +0.8 1,645,112 + +0.1 1,645,752 - -3.3 1,646,335 + EX28DRAFT_1628 0.88 +0.4 1,646,361 - -0.1 1,646,619 + EX28DRAFT_1629 0.32 +0.4 1,646,619 + EX28DRAFT_1629 0.32 +0.2 1,646,636 + EX28DRAFT_1629 0.35 -0.2 1,646,724 + EX28DRAFT_1629 0.49 -1.2 1,646,725 - EX28DRAFT_1629 0.49 +0.6 1,646,834 - EX28DRAFT_1629 0.66 +0.9 1,646,834 - EX28DRAFT_1629 0.66 +0.9 1,646,834 - EX28DRAFT_1629 0.66 +0.5 1,646,857 + EX28DRAFT_1629 0.70 -1.9 1,646,858 - EX28DRAFT_1629 0.70 -1.7 1,646,904 + EX28DRAFT_1629 0.77 +0.3 1,646,926 + EX28DRAFT_1629 0.81 -0.5 1,646,966 + EX28DRAFT_1629 0.87 +1.3 1,646,969 - EX28DRAFT_1629 0.87 -0.1 1,646,969 - EX28DRAFT_1629 0.87 -0.0 1,646,969 - EX28DRAFT_1629 0.87 -0.6 1,647,105 - -0.9 1,647,105 - -0.2
Or see this region's nucleotide sequence