Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1449 and EX28DRAFT_1450 are separated by 142 nucleotides EX28DRAFT_1450 and EX28DRAFT_1451 are separated by 91 nucleotides EX28DRAFT_1451 and EX28DRAFT_1452 are separated by 33 nucleotides
EX28DRAFT_1449: EX28DRAFT_1449 - Zn-dependent oligopeptidases, at 1,462,300 to 1,464,333
_1449
EX28DRAFT_1450: EX28DRAFT_1450 - Short-chain alcohol dehydrogenase of unknown specificity, at 1,464,476 to 1,465,222
_1450
EX28DRAFT_1451: EX28DRAFT_1451 - Transcriptional regulators, at 1,465,314 to 1,466,000
_1451
EX28DRAFT_1452: EX28DRAFT_1452 - Universal stress protein UspA and related nucleotide-binding proteins, at 1,466,034 to 1,466,465
_1452
Position (kb)
1464
1465
1466 Strain fitness (log2 ratio)
-1
0
1
2 at 1464.074 kb on + strand, within EX28DRAFT_1449 at 1464.251 kb on + strand at 1464.368 kb on - strand at 1464.437 kb on + strand at 1464.445 kb on + strand at 1464.556 kb on + strand, within EX28DRAFT_1450 at 1464.809 kb on + strand, within EX28DRAFT_1450 at 1464.809 kb on + strand, within EX28DRAFT_1450 at 1464.809 kb on + strand, within EX28DRAFT_1450 at 1464.809 kb on + strand, within EX28DRAFT_1450 at 1464.810 kb on - strand, within EX28DRAFT_1450 at 1464.810 kb on - strand, within EX28DRAFT_1450 at 1464.811 kb on + strand, within EX28DRAFT_1450 at 1464.868 kb on + strand, within EX28DRAFT_1450 at 1464.914 kb on + strand, within EX28DRAFT_1450 at 1464.961 kb on + strand, within EX28DRAFT_1450 at 1465.162 kb on + strand at 1465.162 kb on + strand at 1465.162 kb on + strand at 1465.221 kb on - strand at 1465.276 kb on + strand at 1465.276 kb on + strand at 1465.276 kb on + strand at 1465.276 kb on + strand at 1465.277 kb on - strand at 1465.277 kb on - strand at 1465.385 kb on + strand, within EX28DRAFT_1451 at 1465.481 kb on + strand, within EX28DRAFT_1451 at 1465.485 kb on - strand, within EX28DRAFT_1451 at 1465.533 kb on + strand, within EX28DRAFT_1451 at 1465.547 kb on - strand, within EX28DRAFT_1451 at 1465.625 kb on + strand, within EX28DRAFT_1451 at 1465.626 kb on - strand, within EX28DRAFT_1451 at 1465.644 kb on + strand, within EX28DRAFT_1451 at 1465.645 kb on - strand, within EX28DRAFT_1451 at 1465.692 kb on - strand, within EX28DRAFT_1451 at 1465.815 kb on + strand, within EX28DRAFT_1451 at 1465.816 kb on - strand, within EX28DRAFT_1451 at 1465.871 kb on + strand, within EX28DRAFT_1451 at 1465.976 kb on + strand at 1465.998 kb on + strand at 1465.998 kb on + strand at 1465.999 kb on - strand at 1466.001 kb on + strand at 1466.172 kb on - strand, within EX28DRAFT_1452
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,464,074 + EX28DRAFT_1449 0.87 +0.4 1,464,251 + -1.4 1,464,368 - +0.8 1,464,437 + +0.4 1,464,445 + +0.3 1,464,556 + EX28DRAFT_1450 0.11 -0.9 1,464,809 + EX28DRAFT_1450 0.45 +1.0 1,464,809 + EX28DRAFT_1450 0.45 +0.0 1,464,809 + EX28DRAFT_1450 0.45 +1.6 1,464,809 + EX28DRAFT_1450 0.45 -0.4 1,464,810 - EX28DRAFT_1450 0.45 +1.1 1,464,810 - EX28DRAFT_1450 0.45 +0.7 1,464,811 + EX28DRAFT_1450 0.45 -1.0 1,464,868 + EX28DRAFT_1450 0.52 -0.1 1,464,914 + EX28DRAFT_1450 0.59 +1.9 1,464,961 + EX28DRAFT_1450 0.65 +0.7 1,465,162 + +0.2 1,465,162 + +0.8 1,465,162 + +0.8 1,465,221 - +0.1 1,465,276 + -0.3 1,465,276 + +0.5 1,465,276 + +0.4 1,465,276 + +2.0 1,465,277 - +0.5 1,465,277 - -0.4 1,465,385 + EX28DRAFT_1451 0.10 -0.6 1,465,481 + EX28DRAFT_1451 0.24 -0.1 1,465,485 - EX28DRAFT_1451 0.25 +0.1 1,465,533 + EX28DRAFT_1451 0.32 -1.4 1,465,547 - EX28DRAFT_1451 0.34 -0.4 1,465,625 + EX28DRAFT_1451 0.45 -0.2 1,465,626 - EX28DRAFT_1451 0.45 -0.7 1,465,644 + EX28DRAFT_1451 0.48 +0.3 1,465,645 - EX28DRAFT_1451 0.48 -0.7 1,465,692 - EX28DRAFT_1451 0.55 -0.4 1,465,815 + EX28DRAFT_1451 0.73 -0.1 1,465,816 - EX28DRAFT_1451 0.73 +1.0 1,465,871 + EX28DRAFT_1451 0.81 +0.8 1,465,976 + -0.0 1,465,998 + +0.2 1,465,998 + +0.3 1,465,999 - -0.5 1,466,001 + +1.0 1,466,172 - EX28DRAFT_1452 0.32 +0.0
Or see this region's nucleotide sequence