Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1402 and EX28DRAFT_1403 are separated by 107 nucleotides EX28DRAFT_1403 and EX28DRAFT_1404 are separated by 329 nucleotides EX28DRAFT_1404 and EX28DRAFT_1405 are separated by 165 nucleotides EX28DRAFT_1405 and EX28DRAFT_1406 are separated by 1 nucleotides
EX28DRAFT_1402: EX28DRAFT_1402 - Glyoxalase-like domain, at 1,412,324 to 1,412,761
_1402
EX28DRAFT_1403: EX28DRAFT_1403 - Acetyltransferases, at 1,412,869 to 1,413,354
_1403
EX28DRAFT_1404: EX28DRAFT_1404 - Predicted kinase, at 1,413,684 to 1,414,190
_1404
EX28DRAFT_1405: EX28DRAFT_1405 - Glutathione peroxidase, at 1,414,356 to 1,414,838
_1405
EX28DRAFT_1406: EX28DRAFT_1406 - Uncharacterized protein conserved in bacteria, at 1,414,840 to 1,415,328
_1406
Position (kb)
1413
1414
1415 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1412.833 kb on - strand at 1412.856 kb on - strand at 1412.856 kb on - strand at 1412.896 kb on + strand at 1412.921 kb on + strand, within EX28DRAFT_1403 at 1412.921 kb on + strand, within EX28DRAFT_1403 at 1412.921 kb on + strand, within EX28DRAFT_1403 at 1412.922 kb on - strand, within EX28DRAFT_1403 at 1412.922 kb on - strand, within EX28DRAFT_1403 at 1412.925 kb on + strand, within EX28DRAFT_1403 at 1412.926 kb on - strand, within EX28DRAFT_1403 at 1412.938 kb on - strand, within EX28DRAFT_1403 at 1413.010 kb on + strand, within EX28DRAFT_1403 at 1413.010 kb on + strand, within EX28DRAFT_1403 at 1413.010 kb on + strand, within EX28DRAFT_1403 at 1413.011 kb on - strand, within EX28DRAFT_1403 at 1413.042 kb on + strand, within EX28DRAFT_1403 at 1413.140 kb on + strand, within EX28DRAFT_1403 at 1413.140 kb on + strand, within EX28DRAFT_1403 at 1413.141 kb on - strand, within EX28DRAFT_1403 at 1413.169 kb on + strand, within EX28DRAFT_1403 at 1413.204 kb on + strand, within EX28DRAFT_1403 at 1413.205 kb on - strand, within EX28DRAFT_1403 at 1413.229 kb on - strand, within EX28DRAFT_1403 at 1413.240 kb on - strand, within EX28DRAFT_1403 at 1413.281 kb on + strand, within EX28DRAFT_1403 at 1413.285 kb on - strand, within EX28DRAFT_1403 at 1413.410 kb on + strand at 1413.413 kb on - strand at 1413.451 kb on - strand at 1413.461 kb on + strand at 1413.515 kb on - strand at 1413.592 kb on + strand at 1413.593 kb on - strand at 1413.734 kb on - strand at 1413.800 kb on - strand, within EX28DRAFT_1404 at 1413.856 kb on + strand, within EX28DRAFT_1404 at 1413.856 kb on + strand, within EX28DRAFT_1404 at 1413.865 kb on - strand, within EX28DRAFT_1404 at 1413.874 kb on - strand, within EX28DRAFT_1404 at 1413.919 kb on + strand, within EX28DRAFT_1404 at 1413.996 kb on - strand, within EX28DRAFT_1404 at 1413.998 kb on + strand, within EX28DRAFT_1404 at 1414.030 kb on - strand, within EX28DRAFT_1404 at 1414.051 kb on + strand, within EX28DRAFT_1404 at 1414.051 kb on + strand, within EX28DRAFT_1404 at 1414.052 kb on - strand, within EX28DRAFT_1404 at 1414.056 kb on - strand, within EX28DRAFT_1404 at 1414.246 kb on + strand at 1414.254 kb on + strand at 1414.254 kb on + strand at 1414.255 kb on - strand at 1414.264 kb on + strand at 1414.264 kb on + strand at 1414.265 kb on - strand at 1414.265 kb on - strand at 1414.265 kb on - strand at 1414.274 kb on + strand at 1414.275 kb on - strand at 1414.336 kb on - strand at 1414.336 kb on - strand at 1414.461 kb on - strand, within EX28DRAFT_1405 at 1414.591 kb on + strand, within EX28DRAFT_1405 at 1414.669 kb on - strand, within EX28DRAFT_1405 at 1414.693 kb on + strand, within EX28DRAFT_1405 at 1414.693 kb on + strand, within EX28DRAFT_1405 at 1414.693 kb on + strand, within EX28DRAFT_1405 at 1414.693 kb on + strand, within EX28DRAFT_1405 at 1414.694 kb on - strand, within EX28DRAFT_1405 at 1414.694 kb on - strand, within EX28DRAFT_1405 at 1414.715 kb on - strand, within EX28DRAFT_1405 at 1414.715 kb on - strand, within EX28DRAFT_1405 at 1414.791 kb on - strand at 1414.841 kb on + strand at 1414.934 kb on + strand, within EX28DRAFT_1406 at 1414.934 kb on + strand, within EX28DRAFT_1406 at 1414.934 kb on + strand, within EX28DRAFT_1406 at 1414.934 kb on + strand, within EX28DRAFT_1406 at 1414.935 kb on - strand, within EX28DRAFT_1406 at 1414.935 kb on - strand, within EX28DRAFT_1406 at 1414.938 kb on + strand, within EX28DRAFT_1406 at 1414.966 kb on - strand, within EX28DRAFT_1406 at 1415.059 kb on - strand, within EX28DRAFT_1406 at 1415.063 kb on + strand, within EX28DRAFT_1406 at 1415.063 kb on + strand, within EX28DRAFT_1406 at 1415.124 kb on + strand, within EX28DRAFT_1406 at 1415.125 kb on - strand, within EX28DRAFT_1406 at 1415.129 kb on - strand, within EX28DRAFT_1406 at 1415.138 kb on + strand, within EX28DRAFT_1406 at 1415.139 kb on - strand, within EX28DRAFT_1406 at 1415.160 kb on + strand, within EX28DRAFT_1406 at 1415.160 kb on + strand, within EX28DRAFT_1406 at 1415.179 kb on - strand, within EX28DRAFT_1406 at 1415.190 kb on - strand, within EX28DRAFT_1406 at 1415.190 kb on - strand, within EX28DRAFT_1406 at 1415.190 kb on - strand, within EX28DRAFT_1406
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,412,833 - -0.6 1,412,856 - +0.5 1,412,856 - -0.1 1,412,896 + -0.6 1,412,921 + EX28DRAFT_1403 0.11 -0.5 1,412,921 + EX28DRAFT_1403 0.11 -1.6 1,412,921 + EX28DRAFT_1403 0.11 -0.4 1,412,922 - EX28DRAFT_1403 0.11 -0.3 1,412,922 - EX28DRAFT_1403 0.11 +0.6 1,412,925 + EX28DRAFT_1403 0.12 -0.2 1,412,926 - EX28DRAFT_1403 0.12 +0.4 1,412,938 - EX28DRAFT_1403 0.14 -1.3 1,413,010 + EX28DRAFT_1403 0.29 +0.1 1,413,010 + EX28DRAFT_1403 0.29 -0.3 1,413,010 + EX28DRAFT_1403 0.29 +1.2 1,413,011 - EX28DRAFT_1403 0.29 +0.1 1,413,042 + EX28DRAFT_1403 0.36 -1.1 1,413,140 + EX28DRAFT_1403 0.56 -0.4 1,413,140 + EX28DRAFT_1403 0.56 +0.2 1,413,141 - EX28DRAFT_1403 0.56 +1.2 1,413,169 + EX28DRAFT_1403 0.62 +2.3 1,413,204 + EX28DRAFT_1403 0.69 -0.0 1,413,205 - EX28DRAFT_1403 0.69 +0.5 1,413,229 - EX28DRAFT_1403 0.74 +0.5 1,413,240 - EX28DRAFT_1403 0.76 -1.1 1,413,281 + EX28DRAFT_1403 0.85 -0.7 1,413,285 - EX28DRAFT_1403 0.86 -1.0 1,413,410 + +1.2 1,413,413 - -0.1 1,413,451 - +0.1 1,413,461 + -1.4 1,413,515 - -1.3 1,413,592 + -0.3 1,413,593 - -0.4 1,413,734 - +0.0 1,413,800 - EX28DRAFT_1404 0.23 +1.6 1,413,856 + EX28DRAFT_1404 0.34 -1.1 1,413,856 + EX28DRAFT_1404 0.34 -2.7 1,413,865 - EX28DRAFT_1404 0.36 -1.1 1,413,874 - EX28DRAFT_1404 0.37 +1.6 1,413,919 + EX28DRAFT_1404 0.46 -1.1 1,413,996 - EX28DRAFT_1404 0.62 -0.7 1,413,998 + EX28DRAFT_1404 0.62 -0.8 1,414,030 - EX28DRAFT_1404 0.68 -0.8 1,414,051 + EX28DRAFT_1404 0.72 -0.7 1,414,051 + EX28DRAFT_1404 0.72 +0.2 1,414,052 - EX28DRAFT_1404 0.73 -0.1 1,414,056 - EX28DRAFT_1404 0.73 +0.2 1,414,246 + -0.3 1,414,254 + -2.5 1,414,254 + -1.3 1,414,255 - -1.4 1,414,264 + +0.2 1,414,264 + +0.4 1,414,265 - +0.4 1,414,265 - +0.5 1,414,265 - +0.4 1,414,274 + -0.3 1,414,275 - +1.0 1,414,336 - -1.3 1,414,336 - +0.0 1,414,461 - EX28DRAFT_1405 0.22 +0.6 1,414,591 + EX28DRAFT_1405 0.49 +0.6 1,414,669 - EX28DRAFT_1405 0.65 +0.2 1,414,693 + EX28DRAFT_1405 0.70 +1.2 1,414,693 + EX28DRAFT_1405 0.70 +1.4 1,414,693 + EX28DRAFT_1405 0.70 +0.0 1,414,693 + EX28DRAFT_1405 0.70 +0.2 1,414,694 - EX28DRAFT_1405 0.70 +0.4 1,414,694 - EX28DRAFT_1405 0.70 +0.3 1,414,715 - EX28DRAFT_1405 0.74 -0.3 1,414,715 - EX28DRAFT_1405 0.74 -3.3 1,414,791 - -0.4 1,414,841 + -0.7 1,414,934 + EX28DRAFT_1406 0.19 -0.8 1,414,934 + EX28DRAFT_1406 0.19 -0.0 1,414,934 + EX28DRAFT_1406 0.19 +1.5 1,414,934 + EX28DRAFT_1406 0.19 -0.0 1,414,935 - EX28DRAFT_1406 0.19 -1.0 1,414,935 - EX28DRAFT_1406 0.19 -2.7 1,414,938 + EX28DRAFT_1406 0.20 +0.9 1,414,966 - EX28DRAFT_1406 0.26 -1.9 1,415,059 - EX28DRAFT_1406 0.45 +0.4 1,415,063 + EX28DRAFT_1406 0.46 +0.4 1,415,063 + EX28DRAFT_1406 0.46 +0.5 1,415,124 + EX28DRAFT_1406 0.58 -1.3 1,415,125 - EX28DRAFT_1406 0.58 -2.7 1,415,129 - EX28DRAFT_1406 0.59 -0.7 1,415,138 + EX28DRAFT_1406 0.61 -0.4 1,415,139 - EX28DRAFT_1406 0.61 -1.4 1,415,160 + EX28DRAFT_1406 0.65 +1.0 1,415,160 + EX28DRAFT_1406 0.65 -0.4 1,415,179 - EX28DRAFT_1406 0.69 -0.1 1,415,190 - EX28DRAFT_1406 0.72 -0.0 1,415,190 - EX28DRAFT_1406 0.72 +1.0 1,415,190 - EX28DRAFT_1406 0.72 -0.3
Or see this region's nucleotide sequence