Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS26145 and ABID97_RS26150 are separated by 16 nucleotides ABID97_RS26150 and ABID97_RS26155 are separated by 99 nucleotides ABID97_RS26155 and ABID97_RS26160 are separated by 59 nucleotides ABID97_RS26160 and ABID97_RS26165 are separated by 48 nucleotides
ABID97_RS26145: ABID97_RS26145 - RidA family protein, at 155,884 to 156,282
_RS26145
ABID97_RS26150: ABID97_RS26150 - TetR/AcrR family transcriptional regulator, at 156,299 to 156,952
_RS26150
ABID97_RS26155: ABID97_RS26155 - NADH:flavin oxidoreductase/NADH oxidase, at 157,052 to 158,221
_RS26155
ABID97_RS26160: ABID97_RS26160 - nuclear transport factor 2 family protein, at 158,281 to 158,670
_RS26160
ABID97_RS26165: ABID97_RS26165 - NAD(P)H-binding protein, at 158,719 to 159,366
_RS26165
Position (kb) 157
158
159 Strain fitness (log2 ratio) -2
-1
0
1 at 156.122 kb on - strand, within ABID97_RS26145 at 156.122 kb on - strand, within ABID97_RS26145 at 156.166 kb on + strand, within ABID97_RS26145 at 156.167 kb on - strand, within ABID97_RS26145 at 156.667 kb on - strand, within ABID97_RS26150 at 156.711 kb on + strand, within ABID97_RS26150 at 156.712 kb on - strand, within ABID97_RS26150 at 156.932 kb on + strand at 157.130 kb on + strand at 157.131 kb on - strand at 157.161 kb on - strand at 157.326 kb on - strand, within ABID97_RS26155 at 157.893 kb on - strand, within ABID97_RS26155 at 158.297 kb on - strand at 158.297 kb on - strand at 158.297 kb on - strand at 158.308 kb on + strand at 158.338 kb on + strand, within ABID97_RS26160 at 158.642 kb on - strand at 158.642 kb on - strand at 159.031 kb on + strand, within ABID97_RS26165 at 159.031 kb on + strand, within ABID97_RS26165 at 159.031 kb on + strand, within ABID97_RS26165 at 159.031 kb on + strand, within ABID97_RS26165 at 159.032 kb on - strand, within ABID97_RS26165 at 159.080 kb on - strand, within ABID97_RS26165
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 156,122 - ABID97_RS26145 0.60 -0.7 156,122 - ABID97_RS26145 0.60 -0.1 156,166 + ABID97_RS26145 0.71 -0.4 156,167 - ABID97_RS26145 0.71 +0.8 156,667 - ABID97_RS26150 0.56 -0.6 156,711 + ABID97_RS26150 0.63 -2.7 156,712 - ABID97_RS26150 0.63 +0.1 156,932 + -0.0 157,130 + +0.2 157,131 - -0.7 157,161 - -0.1 157,326 - ABID97_RS26155 0.23 -0.2 157,893 - ABID97_RS26155 0.72 -0.5 158,297 - -0.2 158,297 - -0.3 158,297 - +0.4 158,308 + -0.8 158,338 + ABID97_RS26160 0.15 -1.0 158,642 - +0.2 158,642 - +0.0 159,031 + ABID97_RS26165 0.48 -0.1 159,031 + ABID97_RS26165 0.48 +0.1 159,031 + ABID97_RS26165 0.48 -0.0 159,031 + ABID97_RS26165 0.48 -0.8 159,032 - ABID97_RS26165 0.48 +0.6 159,080 - ABID97_RS26165 0.56 -0.1
Or see this region's nucleotide sequence