Strain Fitness in Serratia liquefaciens MT49 around IAI46_22335

Experiment: Nickel (II) chloride 80 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, anaerobic
4,754,998	+		IAI46_22325	0.86	-1.0
4,754,998	+		IAI46_22325	0.86	+0.1
4,755,078	-				-0.6
4,755,131	+				-1.8
4,755,132	-				+0.4
4,755,132	-				-0.7
4,755,132	-				-0.4
4,755,132	-				-1.2
4,755,173	+		IAI46_22330	0.12	+0.0
4,755,173	+		IAI46_22330	0.12	-1.2
4,755,173	+		IAI46_22330	0.12	+0.2
4,755,173	+		IAI46_22330	0.12	+1.0
4,755,173	+		IAI46_22330	0.12	+0.3
4,755,174	-		IAI46_22330	0.12	+0.5
4,755,174	-		IAI46_22330	0.12	-0.1
4,755,175	+		IAI46_22330	0.12	+0.2
4,755,175	+		IAI46_22330	0.12	+0.7
4,755,175	+		IAI46_22330	0.12	-0.4
4,755,176	-		IAI46_22330	0.12	-0.4
4,755,176	-		IAI46_22330	0.12	+0.1
4,755,176	-		IAI46_22330	0.12	-1.0
4,755,176	-		IAI46_22330	0.12	-0.1
4,755,318	+		IAI46_22330	0.34	+0.1
4,755,350	+		IAI46_22330	0.39	+0.4
4,755,351	-		IAI46_22330	0.39	-1.1
4,755,351	-		IAI46_22330	0.39	+0.1
4,755,351	-		IAI46_22330	0.39	+0.5
4,755,374	+		IAI46_22330	0.43	-0.2
4,755,390	+		IAI46_22330	0.45	-0.2
4,755,556	-		IAI46_22330	0.70	+1.3
4,755,594	+		IAI46_22330	0.76	+0.1
4,755,594	+		IAI46_22330	0.76	-0.1
4,755,594	+		IAI46_22330	0.76	+1.2
4,755,594	+		IAI46_22330	0.76	-0.0
4,755,595	-		IAI46_22330	0.76	+0.1
4,755,603	-		IAI46_22330	0.78	+1.0
4,755,624	-		IAI46_22330	0.81	+1.3
4,755,702	-				+0.5
4,755,732	+				+0.1
4,755,733	-				+0.4
4,755,768	+				-0.1
4,755,768	+				+0.9
4,755,769	-				+0.2
4,755,810	+				-0.4
4,755,810	+				+0.9
4,755,810	+				+0.4
4,755,810	+				-0.8
4,755,810	+				+0.3
4,755,810	+				-0.0
4,755,811	-				+0.2
4,755,825	-				+1.0
4,755,837	-				+0.2
4,755,858	+				+0.1
4,755,858	+				-1.4
4,755,873	-				-0.3
4,755,873	-				+0.7
4,755,873	-				+0.4
4,755,873	-				-0.4
4,755,915	+				+0.6
4,755,916	-				-0.6
4,755,959	+				+0.6
4,756,024	-				+0.6
4,756,024	-				-2.6
4,756,215	-				-0.4
4,756,215	-				-1.6
4,756,237	+		IAI46_22335	0.11	-0.9
4,756,306	+		IAI46_22335	0.14	-1.9
4,756,307	-		IAI46_22335	0.14	-2.5
4,756,332	+		IAI46_22335	0.15	-1.4
4,756,332	+		IAI46_22335	0.15	-2.1
4,756,343	+		IAI46_22335	0.15	+0.5
4,756,343	+		IAI46_22335	0.15	-1.1
4,756,344	-		IAI46_22335	0.15	-0.9
4,756,409	+		IAI46_22335	0.18	+0.7
4,756,746	-		IAI46_22335	0.32	+0.8
4,756,964	-		IAI46_22335	0.42	+0.7
4,756,964	-		IAI46_22335	0.42	-0.4
4,756,966	+		IAI46_22335	0.42	-1.4
4,756,966	+		IAI46_22335	0.42	-1.1
4,756,966	+		IAI46_22335	0.42	-3.1
4,756,966	+		IAI46_22335	0.42	-0.5
4,756,966	+		IAI46_22335	0.42	-3.2
4,756,966	+		IAI46_22335	0.42	+0.2
4,756,966	+		IAI46_22335	0.42	-0.4
4,756,966	+		IAI46_22335	0.42	+1.4
4,756,967	-		IAI46_22335	0.42	-0.3
4,756,967	-		IAI46_22335	0.42	-1.9
4,757,058	+		IAI46_22335	0.46	-0.5
4,757,059	-		IAI46_22335	0.46	-0.9
4,757,118	+		IAI46_22335	0.48	-1.2
4,757,118	+		IAI46_22335	0.48	-1.2
4,757,118	+		IAI46_22335	0.48	+0.4
4,757,118	+		IAI46_22335	0.48	-0.4
4,757,119	-		IAI46_22335	0.48	+0.2
4,757,327	+		IAI46_22335	0.57	-0.8
4,757,327	+		IAI46_22335	0.57	-1.1
4,757,327	+		IAI46_22335	0.57	-1.0
4,757,340	-		IAI46_22335	0.58	-0.6
4,757,340	-		IAI46_22335	0.58	-0.7
4,757,340	-		IAI46_22335	0.58	-0.7
4,757,368	+		IAI46_22335	0.59	+0.3
4,757,368	+		IAI46_22335	0.59	-0.0
4,757,389	-		IAI46_22335	0.60	-0.4
4,757,389	-		IAI46_22335	0.60	-0.3
4,757,520	-		IAI46_22335	0.66	-1.1
4,757,520	-		IAI46_22335	0.66	-0.2
4,757,520	-		IAI46_22335	0.66	+0.0
4,757,644	+		IAI46_22335	0.71	+2.4
4,757,644	+		IAI46_22335	0.71	-0.2
4,757,688	+		IAI46_22335	0.73	-1.0
4,757,725	+		IAI46_22335	0.74	-0.4
4,757,726	-		IAI46_22335	0.74	-0.5
4,757,786	+		IAI46_22335	0.77	-0.3
4,757,821	+		IAI46_22335	0.78	-0.2
4,757,821	+		IAI46_22335	0.78	-1.0
4,757,821	+		IAI46_22335	0.78	-2.9
4,757,821	+		IAI46_22335	0.78	-0.6
4,757,822	-		IAI46_22335	0.78	-0.3
4,757,822	-		IAI46_22335	0.78	-0.4
4,757,822	-		IAI46_22335	0.78	+0.0
4,757,822	-		IAI46_22335	0.78	-1.8
4,757,960	+		IAI46_22335	0.84	-0.4
4,757,961	-		IAI46_22335	0.84	-1.1
4,758,050	+		IAI46_22335	0.88	-0.5
4,758,050	+		IAI46_22335	0.88	+1.0
4,758,050	+		IAI46_22335	0.88	-3.3
4,758,050	+		IAI46_22335	0.88	-0.7
4,758,050	+		IAI46_22335	0.88	-0.7
4,758,051	-		IAI46_22335	0.88	+0.1
4,758,051	-		IAI46_22335	0.88	-0.9
4,758,051	-		IAI46_22335	0.88	-1.0
4,758,054	+		IAI46_22335	0.88	-2.2
4,758,116	-				+0.1
4,758,131	+				-0.7
4,758,295	+				-0.8
4,758,295	+				-1.5
4,758,299	-				-1.2
4,758,299	-				+0.2
4,758,353	+				-0.1
4,758,366	-				+1.2
4,758,366	-				-0.8
4,758,488	+				+0.3
4,758,488	+				-1.4
4,758,488	+				+0.9
4,758,489	-				+1.0
4,758,489	-				+0.7
4,758,578	-		IAI46_22340	0.16	-1.3
4,758,578	-		IAI46_22340	0.16	+0.4
4,758,586	-		IAI46_22340	0.17	+0.5
4,758,586	-		IAI46_22340	0.17	+0.2
4,758,586	-		IAI46_22340	0.17	-0.4
4,758,587	+		IAI46_22340	0.17	-1.4
4,758,588	-		IAI46_22340	0.17	+0.2
4,758,588	-		IAI46_22340	0.17	-0.6
4,758,588	-		IAI46_22340	0.17	-0.7
4,758,588	-		IAI46_22340	0.17	+0.4
4,758,588	-		IAI46_22340	0.17	+0.0
4,758,636	+		IAI46_22340	0.22	+0.7
4,758,636	+		IAI46_22340	0.22	-1.0
4,758,637	-		IAI46_22340	0.22	+0.5
4,758,758	+		IAI46_22340	0.35	-0.0
4,758,758	+		IAI46_22340	0.35	-0.6
4,758,759	-		IAI46_22340	0.35	+0.1
4,758,759	-		IAI46_22340	0.35	+0.4
4,758,814	+		IAI46_22340	0.41	-0.3
4,758,861	+		IAI46_22340	0.46	+0.0
4,758,905	-		IAI46_22340	0.51	-0.0
4,758,961	-		IAI46_22340	0.57	+0.3
4,759,030	+		IAI46_22340	0.65	-0.4
4,759,057	-		IAI46_22340	0.68	+0.9
4,759,057	-		IAI46_22340	0.68	-0.2
4,759,086	+		IAI46_22340	0.71	+0.4
4,759,086	+		IAI46_22340	0.71	-0.1
4,759,086	+		IAI46_22340	0.71	+0.0
4,759,087	-		IAI46_22340	0.71	+1.0
4,759,090	+		IAI46_22340	0.71	-0.3
4,759,090	+		IAI46_22340	0.71	-1.0
4,759,091	-		IAI46_22340	0.71	-0.7
4,759,091	-		IAI46_22340	0.71	+0.4
4,759,098	+		IAI46_22340	0.72	-0.1
4,759,099	-		IAI46_22340	0.72	+1.6
4,759,099	-		IAI46_22340	0.72	-0.1
4,759,119	+		IAI46_22340	0.74	+0.4
4,759,222	+		IAI46_22340	0.85	+0.5
4,759,223	-		IAI46_22340	0.85	+0.5
4,759,223	-		IAI46_22340	0.85	+0.0
4,759,223	-		IAI46_22340	0.85	+0.2
4,759,223	-		IAI46_22340	0.85	+0.9
4,759,223	-		IAI46_22340	0.85	+1.0
4,759,223	-		IAI46_22340	0.85	-0.1
4,759,223	-		IAI46_22340	0.85	+0.3
4,759,289	-				+0.5
4,759,289	-				+0.8