Strain Fitness in Serratia liquefaciens MT49 around IAI46_20485

Experiment: Nickel (II) chloride 80 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, anaerobic
4,331,632	+		IAI46_20480	0.23	-3.0
4,331,640	-		IAI46_20480	0.23	+0.6
4,331,649	-		IAI46_20480	0.24	-0.5
4,331,703	-		IAI46_20480	0.29	-0.9
4,331,885	+		IAI46_20480	0.44	-0.0
4,331,885	+		IAI46_20480	0.44	+0.1
4,332,008	+		IAI46_20480	0.54	-0.2
4,332,009	-		IAI46_20480	0.54	+0.4
4,332,009	-		IAI46_20480	0.54	+1.0
4,332,009	-		IAI46_20480	0.54	-0.8
4,332,051	+		IAI46_20480	0.58	+0.2
4,332,051	+		IAI46_20480	0.58	-0.8
4,332,126	-		IAI46_20480	0.64	+0.7
4,332,197	-		IAI46_20480	0.70	+0.2
4,332,211	+		IAI46_20480	0.71	-0.0
4,332,211	+		IAI46_20480	0.71	+0.8
4,332,211	+		IAI46_20480	0.71	+0.3
4,332,212	-		IAI46_20480	0.71	-0.3
4,332,239	+		IAI46_20480	0.73	+0.2
4,332,240	-		IAI46_20480	0.73	+0.5
4,332,373	+		IAI46_20480	0.85	-0.8
4,332,373	+		IAI46_20480	0.85	-0.3
4,332,373	+		IAI46_20480	0.85	+0.9
4,332,373	+		IAI46_20480	0.85	-0.3
4,332,374	-		IAI46_20480	0.85	+0.6
4,332,374	-		IAI46_20480	0.85	-0.5
4,332,374	-		IAI46_20480	0.85	-1.3
4,332,374	-		IAI46_20480	0.85	+1.0
4,332,374	-		IAI46_20480	0.85	+0.5
4,332,374	-		IAI46_20480	0.85	+1.3
4,332,421	+		IAI46_20480	0.89	+0.6
4,332,586	+				-2.0
4,332,650	-				+0.1
4,332,757	+				-0.1
4,332,757	+				+2.1
4,332,758	-				+0.4
4,332,804	-		IAI46_20485	0.11	-0.0
4,332,894	+		IAI46_20485	0.16	+0.9
4,332,920	-		IAI46_20485	0.17	+0.8
4,332,934	-		IAI46_20485	0.18	-0.2
4,332,934	-		IAI46_20485	0.18	+1.5
4,333,079	+		IAI46_20485	0.24	+0.3
4,333,094	-		IAI46_20485	0.25	+1.0
4,333,180	-		IAI46_20485	0.29	+0.2
4,333,203	+		IAI46_20485	0.30	+0.6
4,333,204	-		IAI46_20485	0.30	+0.7
4,333,204	-		IAI46_20485	0.30	-0.2
4,333,264	-		IAI46_20485	0.33	-1.1
4,333,264	-		IAI46_20485	0.33	-0.2
4,333,284	+		IAI46_20485	0.34	+0.7
4,333,285	-		IAI46_20485	0.34	+1.1
4,333,305	+		IAI46_20485	0.35	+0.1
4,333,305	+		IAI46_20485	0.35	-0.5
4,333,305	+		IAI46_20485	0.35	+0.9
4,333,305	+		IAI46_20485	0.35	+1.4
4,333,305	+		IAI46_20485	0.35	-0.7
4,333,305	+		IAI46_20485	0.35	+0.1
4,333,305	+		IAI46_20485	0.35	-1.7
4,333,306	-		IAI46_20485	0.35	-0.8
4,333,306	-		IAI46_20485	0.35	+1.0
4,333,306	-		IAI46_20485	0.35	+0.2
4,333,309	+		IAI46_20485	0.35	+0.4
4,333,309	+		IAI46_20485	0.35	+1.5
4,333,309	+		IAI46_20485	0.35	-0.6
4,333,310	-		IAI46_20485	0.35	-0.3
4,333,310	-		IAI46_20485	0.35	+0.1
4,333,337	+		IAI46_20485	0.36	+0.5
4,333,338	-		IAI46_20485	0.36	+0.1
4,333,338	-		IAI46_20485	0.36	-2.5
4,333,348	+		IAI46_20485	0.37	+0.4
4,333,348	+		IAI46_20485	0.37	-0.6
4,333,349	-		IAI46_20485	0.37	+0.2
4,333,356	+		IAI46_20485	0.37	+0.1
4,333,356	+		IAI46_20485	0.37	+1.0
4,333,356	+		IAI46_20485	0.37	-0.1
4,333,356	+		IAI46_20485	0.37	-1.0
4,333,356	+		IAI46_20485	0.37	+0.5
4,333,357	-		IAI46_20485	0.37	+0.4
4,333,357	-		IAI46_20485	0.37	-0.5
4,333,357	-		IAI46_20485	0.37	+0.7
4,333,483	+		IAI46_20485	0.43	+0.3
4,333,483	+		IAI46_20485	0.43	+0.8
4,333,484	-		IAI46_20485	0.43	-1.5
4,333,517	-		IAI46_20485	0.45	+1.3
4,333,717	-		IAI46_20485	0.54	+0.5
4,333,801	+		IAI46_20485	0.58	+1.1
4,333,851	+		IAI46_20485	0.60	+0.1
4,333,852	-		IAI46_20485	0.60	-1.0
4,333,852	-		IAI46_20485	0.60	-0.0
4,333,928	+		IAI46_20485	0.64	-0.3
4,333,928	+		IAI46_20485	0.64	-0.4
4,333,929	-		IAI46_20485	0.64	-0.5
4,333,929	-		IAI46_20485	0.64	+0.6
4,333,973	-		IAI46_20485	0.66	+0.5
4,334,010	+		IAI46_20485	0.67	-1.0
4,334,010	+		IAI46_20485	0.67	+0.4
4,334,011	-		IAI46_20485	0.68	+0.3
4,334,341	+		IAI46_20485	0.83	-0.2
4,334,491	+		IAI46_20485	0.90	+0.1
4,334,492	-		IAI46_20485	0.90	+1.0
4,334,493	+		IAI46_20485	0.90	-0.7
4,334,493	+		IAI46_20485	0.90	+0.4
4,334,494	-		IAI46_20485	0.90	+0.7
4,334,494	-		IAI46_20485	0.90	+0.4
4,334,494	-		IAI46_20485	0.90	-0.2
4,334,513	-				+1.4
4,334,539	-				+0.3
4,334,585	-				-0.7
4,334,585	-				-0.3
4,334,585	-				-0.6
4,334,585	-				+0.3
4,334,614	+				-0.3
4,334,762	-				-0.4
4,334,764	+				+0.2
4,334,764	+				+0.5
4,334,764	+				+0.5
4,334,764	+				+0.5
4,334,764	+				-0.0
4,334,765	-				-1.0
4,334,765	-				-0.3
4,334,765	-				+0.6
4,334,766	+				-0.5
4,334,766	+				-1.6
4,334,766	+				-0.6
4,334,767	-				-0.5
4,334,830	+				+1.0
4,334,830	+				+0.1
4,334,831	-				-1.6
4,334,837	+				+0.4
4,334,837	+				-0.5
4,334,838	-				-0.6
4,334,838	-				-0.8
4,334,838	-				+0.5
4,334,838	-				-0.7
4,334,838	-				+0.6
4,334,861	-				+0.4
4,334,876	+				-0.4
4,334,876	+				+0.9
4,334,876	+				+0.1
4,334,876	+				+1.0
4,334,881	+				+0.7
4,334,881	+				-1.0
4,334,881	+				+0.5
4,334,882	-				-0.6
4,334,882	-				+1.3
4,334,964	-				-0.7
4,334,986	+				+0.4
4,335,064	+				+0.6
4,335,064	+				+0.1
4,335,064	+				+0.7
4,335,076	+				-0.3
4,335,077	-				+0.4
4,335,077	-				+0.5
4,335,077	-				+1.6
4,335,092	-				+0.6
4,335,092	-				+0.1
4,335,134	+				-1.0
4,335,134	+				-0.2
4,335,135	-				-0.7
4,335,149	+				+0.0
4,335,198	-				+0.7
4,335,211	+				-1.6
4,335,212	-				-1.2
4,335,212	-				+1.8
4,335,224	-				-0.1
4,335,284	+				-0.6
4,335,296	+				-0.5
4,335,296	+				+0.4
4,335,297	-				-0.8
4,335,297	-				+0.2
4,335,474	-				+1.1
4,335,512	+		IAI46_20490	0.10	+0.4
4,335,512	+		IAI46_20490	0.10	+0.7
4,335,527	+		IAI46_20490	0.11	-0.1
4,335,527	+		IAI46_20490	0.11	-0.3
4,335,528	-		IAI46_20490	0.11	+0.2
4,335,562	+		IAI46_20490	0.13	-0.3
4,335,562	+		IAI46_20490	0.13	+1.5
4,335,562	+		IAI46_20490	0.13	+0.9
4,335,562	+		IAI46_20490	0.13	+1.1
4,335,562	+		IAI46_20490	0.13	-1.2
4,335,562	+		IAI46_20490	0.13	-0.1
4,335,563	-		IAI46_20490	0.13	-0.0
4,335,563	-		IAI46_20490	0.13	-0.1
4,335,563	-		IAI46_20490	0.13	+1.9
4,335,564	+		IAI46_20490	0.13	+0.5
4,335,564	+		IAI46_20490	0.13	-0.3
4,335,564	+		IAI46_20490	0.13	-0.4
4,335,564	+		IAI46_20490	0.13	+0.5
4,335,565	-		IAI46_20490	0.13	+0.0
4,335,565	-		IAI46_20490	0.13	-1.3
4,335,565	-		IAI46_20490	0.13	+0.4
4,335,565	-		IAI46_20490	0.13	+0.6
4,335,649	+		IAI46_20490	0.16	-1.2
4,335,649	+		IAI46_20490	0.16	+0.2
4,335,649	+		IAI46_20490	0.16	+0.1
4,335,650	-		IAI46_20490	0.16	-0.1
4,335,650	-		IAI46_20490	0.16	+0.6
4,335,650	-		IAI46_20490	0.16	+0.4
4,335,653	+		IAI46_20490	0.17	+0.3
4,335,653	+		IAI46_20490	0.17	+0.3
4,335,654	-		IAI46_20490	0.17	-0.2
4,335,654	-		IAI46_20490	0.17	-0.4