Strain Fitness in Serratia liquefaciens MT49 around IAI46_05480

Experiment: Nickel (II) chloride 80 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 80 uM, anaerobic
1,178,218	-		IAI46_05470	0.66	-0.1
1,178,242	-		IAI46_05470	0.71	+0.1
1,178,311	+		IAI46_05470	0.84	+0.5
1,178,311	+		IAI46_05470	0.84	+0.6
1,178,311	+		IAI46_05470	0.84	+0.2
1,178,312	-		IAI46_05470	0.84	-0.6
1,178,366	+				+0.2
1,178,386	+				+0.5
1,178,386	+				+0.2
1,178,387	-				-0.7
1,178,388	+				-0.1
1,178,397	-				+0.1
1,178,488	-				+1.6
1,178,490	-				+1.4
1,178,494	-				-0.5
1,178,494	-				+0.5
1,178,500	-				+2.0
1,178,574	+		IAI46_05475	0.17	-1.3
1,178,583	+		IAI46_05475	0.19	+0.3
1,178,604	+		IAI46_05475	0.23	+0.1
1,178,643	+		IAI46_05475	0.30	-1.6
1,178,643	+		IAI46_05475	0.30	+0.3
1,178,644	-		IAI46_05475	0.30	-0.6
1,178,677	-		IAI46_05475	0.36	-0.3
1,178,745	+		IAI46_05475	0.49	+0.2
1,178,749	-		IAI46_05475	0.50	-0.3
1,178,756	+		IAI46_05475	0.51	+0.1
1,178,846	+		IAI46_05475	0.68	-0.2
1,178,877	+		IAI46_05475	0.73	+0.4
1,178,935	+		IAI46_05475	0.84	-0.1
1,178,936	-		IAI46_05475	0.84	-0.6
1,178,958	+		IAI46_05475	0.88	+0.1
1,178,958	+		IAI46_05475	0.88	+0.1
1,178,959	-		IAI46_05475	0.88	-0.0
1,178,959	-		IAI46_05475	0.88	+0.1
1,178,969	+				+0.6
1,178,970	-				-0.1
1,178,984	-				+1.2
1,178,995	-				+0.4
1,179,069	+				+0.5
1,179,070	-				+0.9
1,179,262	+				+0.5
1,179,280	+				+0.2
1,179,281	-				+0.8
1,179,330	+				-0.3
1,179,336	+				-1.2
1,179,422	+		IAI46_05480	0.13	-0.8
1,179,423	-		IAI46_05480	0.13	-1.7
1,179,525	+		IAI46_05480	0.17	-0.6
1,179,613	+		IAI46_05480	0.21	-0.7
1,179,613	+		IAI46_05480	0.21	-0.1
1,179,614	-		IAI46_05480	0.21	-0.0
1,179,614	-		IAI46_05480	0.21	+0.3
1,179,665	-		IAI46_05480	0.23	-0.4
1,179,678	+		IAI46_05480	0.23	-0.6
1,179,799	+		IAI46_05480	0.28	+0.0
1,179,799	+		IAI46_05480	0.28	+1.6
1,179,799	+		IAI46_05480	0.28	+0.1
1,179,805	+		IAI46_05480	0.28	-0.2
1,179,837	-		IAI46_05480	0.29	+0.9
1,179,853	+		IAI46_05480	0.30	-0.7
1,179,918	+		IAI46_05480	0.33	-0.3
1,179,918	+		IAI46_05480	0.33	-0.5
1,179,919	-		IAI46_05480	0.33	+0.4
1,179,919	-		IAI46_05480	0.33	-0.2
1,180,014	-		IAI46_05480	0.36	+0.4
1,180,014	-		IAI46_05480	0.36	+1.5
1,180,059	+		IAI46_05480	0.38	+0.5
1,180,059	+		IAI46_05480	0.38	-2.1
1,180,059	+		IAI46_05480	0.38	+0.8
1,180,151	-		IAI46_05480	0.42	+0.1
1,180,151	-		IAI46_05480	0.42	-1.0
1,180,282	+		IAI46_05480	0.47	-0.4
1,180,361	+		IAI46_05480	0.50	+0.5
1,180,429	+		IAI46_05480	0.53	+0.9
1,180,441	+		IAI46_05480	0.53	-0.0
1,180,442	-		IAI46_05480	0.53	-0.4
1,180,463	-		IAI46_05480	0.54	+1.5
1,180,518	+		IAI46_05480	0.56	-1.2
1,180,519	-		IAI46_05480	0.56	-0.4
1,180,528	+		IAI46_05480	0.56	+0.1
1,180,529	-		IAI46_05480	0.56	+0.7
1,180,529	-		IAI46_05480	0.56	-1.3
1,180,579	+		IAI46_05480	0.58	+0.4
1,180,579	+		IAI46_05480	0.58	+0.1
1,180,627	+		IAI46_05480	0.60	+1.2
1,180,627	+		IAI46_05480	0.60	-2.0
1,180,628	-		IAI46_05480	0.60	-0.3
1,180,636	+		IAI46_05480	0.61	+0.4
1,180,638	+		IAI46_05480	0.61	-0.3
1,180,755	+		IAI46_05480	0.65	+0.8
1,180,756	-		IAI46_05480	0.65	-1.5
1,180,760	-		IAI46_05480	0.65	-0.3
1,180,786	+		IAI46_05480	0.67	-1.5
1,180,786	+		IAI46_05480	0.67	-0.3
1,180,787	-		IAI46_05480	0.67	-0.4
1,180,851	+		IAI46_05480	0.69	+0.8
1,180,852	-		IAI46_05480	0.69	-0.4
1,180,876	+		IAI46_05480	0.70	+0.6
1,180,877	-		IAI46_05480	0.70	+0.4
1,180,906	+		IAI46_05480	0.71	+0.2
1,180,955	-		IAI46_05480	0.73	+0.8
1,180,957	+		IAI46_05480	0.73	+0.2
1,180,958	-		IAI46_05480	0.73	-0.8
1,180,958	-		IAI46_05480	0.73	+0.3
1,180,958	-		IAI46_05480	0.73	+0.1
1,180,959	+		IAI46_05480	0.73	-0.0
1,181,002	+		IAI46_05480	0.75	+0.8
1,181,002	+		IAI46_05480	0.75	+0.3
1,181,018	-		IAI46_05480	0.76	+0.6
1,181,032	-		IAI46_05480	0.76	-0.0
1,181,079	-		IAI46_05480	0.78	-0.4
1,181,155	+		IAI46_05480	0.81	+1.5
1,181,163	+		IAI46_05480	0.81	+0.6
1,181,215	+		IAI46_05480	0.83	+0.5
1,181,215	+		IAI46_05480	0.83	+0.0
1,181,215	+		IAI46_05480	0.83	+1.5
1,181,215	+		IAI46_05480	0.83	+0.7
1,181,215	+		IAI46_05480	0.83	+0.3
1,181,216	-		IAI46_05480	0.83	-0.7
1,181,216	-		IAI46_05480	0.83	-0.2
1,181,218	+		IAI46_05480	0.83	+0.4
1,181,219	-		IAI46_05480	0.83	-0.1
1,181,224	-		IAI46_05480	0.84	+0.5
1,181,227	-		IAI46_05480	0.84	+0.0
1,181,247	+		IAI46_05480	0.85	+0.2
1,181,247	+		IAI46_05480	0.85	-0.8
1,181,433	+				+0.2
1,181,458	+				-0.2
1,181,459	-				+0.0
1,181,469	+				-0.8
1,181,570	+				+0.1
1,181,570	+				+0.4
1,181,571	-				-0.6
1,181,679	+				+0.8
1,181,694	-				+0.7
1,181,723	+				-0.1
1,181,795	+				+1.7
1,181,795	+				+1.5
1,181,953	-		IAI46_05485	0.26	+2.0
1,182,013	+		IAI46_05485	0.34	+0.2
1,182,014	-		IAI46_05485	0.34	-1.0
1,182,032	+		IAI46_05485	0.36	-0.3
1,182,114	+		IAI46_05485	0.47	+0.1
1,182,115	-		IAI46_05485	0.47	-2.5
1,182,117	+		IAI46_05485	0.47	+0.0
1,182,117	+		IAI46_05485	0.47	+0.0
1,182,117	+		IAI46_05485	0.47	-0.4
1,182,117	+		IAI46_05485	0.47	-1.9
1,182,118	-		IAI46_05485	0.47	+1.8
1,182,118	-		IAI46_05485	0.47	-1.4
1,182,223	+		IAI46_05485	0.60	-0.3
1,182,266	+		IAI46_05485	0.66	+0.0
1,182,267	-		IAI46_05485	0.66	+0.1
1,182,267	-		IAI46_05485	0.66	-1.1
1,182,282	+		IAI46_05485	0.68	-0.0
1,182,282	+		IAI46_05485	0.68	-0.0
1,182,294	-		IAI46_05485	0.69	+1.0
1,182,306	+		IAI46_05485	0.71	+0.4
1,182,306	+		IAI46_05485	0.71	-0.3
1,182,306	+		IAI46_05485	0.71	+1.2
1,182,309	+		IAI46_05485	0.71	+1.2
1,182,309	+		IAI46_05485	0.71	-0.3
1,182,309	+		IAI46_05485	0.71	-0.3
1,182,310	-		IAI46_05485	0.71	+0.3
1,182,310	-		IAI46_05485	0.71	+0.6
1,182,310	-		IAI46_05485	0.71	+1.0
1,182,310	-		IAI46_05485	0.71	+1.5
1,182,310	-		IAI46_05485	0.71	+0.0
1,182,448	-		IAI46_05485	0.89	-0.2
1,182,448	-		IAI46_05485	0.89	-0.3
1,182,448	-		IAI46_05485	0.89	-0.8
1,182,448	-		IAI46_05485	0.89	+0.0
1,182,448	-		IAI46_05485	0.89	-0.1
1,182,460	-				-0.0
1,182,460	-				-1.1
1,182,534	+				-0.7
1,182,534	+				-0.2
1,182,534	+				+0.1
1,182,534	+				-0.9
1,182,534	+				+0.1
1,182,534	+				-0.7
1,182,535	-				+0.2
1,182,535	-				+0.0
1,182,618	+				-0.5
1,182,619	-				-0.0
1,182,619	-				+0.3
1,182,619	-				-0.5