Experiment: Nickel (II) chloride 80 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02480 and IAI46_02485 are separated by 222 nucleotides IAI46_02485 and IAI46_02490 are separated by 390 nucleotides
IAI46_02480: IAI46_02480 - 6-phospho-beta-glucosidase, at 530,883 to 532,313
_02480
IAI46_02485: IAI46_02485 - PTS cellobiose/arbutin/salicin transporter subunit IIBC, at 532,536 to 533,978
_02485
IAI46_02490: IAI46_02490 - LacI family DNA-binding transcriptional regulator, at 534,369 to 535,403
_02490
Position (kb) 532
533
534 Strain fitness (log2 ratio) -2
-1
0
1
2 at 531.679 kb on - strand, within IAI46_02480 at 531.689 kb on - strand, within IAI46_02480 at 531.689 kb on - strand, within IAI46_02480 at 531.689 kb on - strand, within IAI46_02480 at 531.788 kb on - strand, within IAI46_02480 at 531.937 kb on + strand, within IAI46_02480 at 531.938 kb on - strand, within IAI46_02480 at 531.967 kb on + strand, within IAI46_02480 at 532.052 kb on + strand, within IAI46_02480 at 532.326 kb on + strand at 532.335 kb on + strand at 532.335 kb on + strand at 532.336 kb on - strand at 532.365 kb on + strand at 532.365 kb on + strand at 532.366 kb on - strand at 532.458 kb on + strand at 532.458 kb on + strand at 532.459 kb on - strand at 532.466 kb on + strand at 532.482 kb on + strand at 532.482 kb on + strand at 532.482 kb on + strand at 532.483 kb on - strand at 532.483 kb on - strand at 532.483 kb on - strand at 532.513 kb on + strand at 532.513 kb on + strand at 532.513 kb on + strand at 532.513 kb on + strand at 532.513 kb on + strand at 532.514 kb on - strand at 532.514 kb on - strand at 532.514 kb on - strand at 532.514 kb on - strand at 532.514 kb on - strand at 532.514 kb on - strand at 532.514 kb on - strand at 532.514 kb on - strand at 532.514 kb on - strand at 532.517 kb on + strand at 532.518 kb on - strand at 532.518 kb on - strand at 532.529 kb on + strand at 532.787 kb on + strand, within IAI46_02485 at 532.787 kb on + strand, within IAI46_02485 at 532.843 kb on + strand, within IAI46_02485 at 532.844 kb on - strand, within IAI46_02485 at 533.116 kb on + strand, within IAI46_02485 at 533.117 kb on - strand, within IAI46_02485 at 533.131 kb on + strand, within IAI46_02485 at 533.131 kb on + strand, within IAI46_02485 at 533.132 kb on - strand, within IAI46_02485 at 533.147 kb on + strand, within IAI46_02485 at 533.279 kb on + strand, within IAI46_02485 at 533.281 kb on + strand, within IAI46_02485 at 533.282 kb on - strand, within IAI46_02485 at 533.282 kb on - strand, within IAI46_02485 at 533.282 kb on - strand, within IAI46_02485 at 533.282 kb on - strand, within IAI46_02485 at 533.323 kb on + strand, within IAI46_02485 at 533.323 kb on + strand, within IAI46_02485 at 533.323 kb on + strand, within IAI46_02485 at 533.323 kb on + strand, within IAI46_02485 at 533.324 kb on - strand, within IAI46_02485 at 533.329 kb on + strand, within IAI46_02485 at 533.330 kb on - strand, within IAI46_02485 at 533.330 kb on - strand, within IAI46_02485 at 533.354 kb on - strand, within IAI46_02485 at 533.394 kb on + strand, within IAI46_02485 at 533.395 kb on - strand, within IAI46_02485 at 533.395 kb on - strand, within IAI46_02485 at 533.395 kb on - strand, within IAI46_02485 at 533.402 kb on + strand, within IAI46_02485 at 533.466 kb on - strand, within IAI46_02485 at 533.573 kb on + strand, within IAI46_02485 at 533.574 kb on - strand, within IAI46_02485 at 533.755 kb on + strand, within IAI46_02485 at 533.755 kb on + strand, within IAI46_02485 at 533.936 kb on + strand at 533.937 kb on - strand at 533.937 kb on - strand at 533.937 kb on - strand at 533.965 kb on + strand at 533.966 kb on - strand at 533.984 kb on - strand at 533.993 kb on + strand at 533.994 kb on - strand at 533.998 kb on + strand at 534.004 kb on + strand at 534.005 kb on - strand at 534.005 kb on - strand at 534.007 kb on - strand at 534.007 kb on - strand at 534.007 kb on - strand at 534.007 kb on - strand at 534.016 kb on - strand at 534.016 kb on - strand at 534.016 kb on - strand at 534.120 kb on - strand at 534.123 kb on + strand at 534.124 kb on - strand at 534.128 kb on + strand at 534.128 kb on + strand at 534.129 kb on - strand at 534.130 kb on + strand at 534.130 kb on + strand at 534.130 kb on + strand at 534.130 kb on + strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.134 kb on + strand at 534.134 kb on + strand at 534.134 kb on + strand at 534.135 kb on - strand at 534.164 kb on + strand at 534.165 kb on - strand at 534.379 kb on + strand at 534.379 kb on + strand at 534.380 kb on - strand at 534.380 kb on - strand at 534.447 kb on + strand at 534.447 kb on + strand at 534.447 kb on + strand at 534.448 kb on - strand at 534.448 kb on - strand at 534.579 kb on + strand, within IAI46_02490 at 534.591 kb on + strand, within IAI46_02490 at 534.591 kb on + strand, within IAI46_02490 at 534.592 kb on - strand, within IAI46_02490 at 534.738 kb on + strand, within IAI46_02490 at 534.739 kb on - strand, within IAI46_02490 at 534.837 kb on + strand, within IAI46_02490 at 534.837 kb on + strand, within IAI46_02490 at 534.838 kb on - strand, within IAI46_02490 at 534.838 kb on - strand, within IAI46_02490 at 534.838 kb on - strand, within IAI46_02490 at 534.838 kb on - strand, within IAI46_02490 at 534.971 kb on + strand, within IAI46_02490 at 534.971 kb on + strand, within IAI46_02490
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, anaerobic remove 531,679 - IAI46_02480 0.56 +0.3 531,689 - IAI46_02480 0.56 +0.8 531,689 - IAI46_02480 0.56 +0.2 531,689 - IAI46_02480 0.56 -0.4 531,788 - IAI46_02480 0.63 +0.1 531,937 + IAI46_02480 0.74 -0.7 531,938 - IAI46_02480 0.74 -0.1 531,967 + IAI46_02480 0.76 -0.2 532,052 + IAI46_02480 0.82 +0.6 532,326 + +0.0 532,335 + +0.3 532,335 + -1.0 532,336 - +0.4 532,365 + -0.3 532,365 + -0.7 532,366 - +0.4 532,458 + -1.1 532,458 + +1.1 532,459 - +1.3 532,466 + +0.8 532,482 + -0.7 532,482 + -0.2 532,482 + +0.4 532,483 - -1.3 532,483 - +0.1 532,483 - +1.0 532,513 + +0.1 532,513 + -1.4 532,513 + -0.2 532,513 + -0.0 532,513 + +0.5 532,514 - +0.2 532,514 - +0.9 532,514 - -0.1 532,514 - -0.7 532,514 - -0.2 532,514 - +0.1 532,514 - -1.0 532,514 - -0.3 532,514 - -0.2 532,517 + -0.4 532,518 - +0.2 532,518 - -0.1 532,529 + -1.5 532,787 + IAI46_02485 0.17 +0.1 532,787 + IAI46_02485 0.17 -0.3 532,843 + IAI46_02485 0.21 -1.6 532,844 - IAI46_02485 0.21 +0.2 533,116 + IAI46_02485 0.40 +0.1 533,117 - IAI46_02485 0.40 -0.0 533,131 + IAI46_02485 0.41 +0.4 533,131 + IAI46_02485 0.41 +0.5 533,132 - IAI46_02485 0.41 +0.6 533,147 + IAI46_02485 0.42 -0.2 533,279 + IAI46_02485 0.51 +0.1 533,281 + IAI46_02485 0.52 +2.7 533,282 - IAI46_02485 0.52 -1.5 533,282 - IAI46_02485 0.52 -1.7 533,282 - IAI46_02485 0.52 -0.1 533,282 - IAI46_02485 0.52 -0.3 533,323 + IAI46_02485 0.55 +0.3 533,323 + IAI46_02485 0.55 +0.6 533,323 + IAI46_02485 0.55 -0.6 533,323 + IAI46_02485 0.55 -0.3 533,324 - IAI46_02485 0.55 -0.1 533,329 + IAI46_02485 0.55 +0.1 533,330 - IAI46_02485 0.55 -0.5 533,330 - IAI46_02485 0.55 +1.1 533,354 - IAI46_02485 0.57 +0.0 533,394 + IAI46_02485 0.59 +0.1 533,395 - IAI46_02485 0.60 -0.1 533,395 - IAI46_02485 0.60 -0.5 533,395 - IAI46_02485 0.60 -0.1 533,402 + IAI46_02485 0.60 +0.1 533,466 - IAI46_02485 0.64 -0.2 533,573 + IAI46_02485 0.72 -0.6 533,574 - IAI46_02485 0.72 +0.5 533,755 + IAI46_02485 0.84 +0.7 533,755 + IAI46_02485 0.84 -0.3 533,936 + +0.7 533,937 - -0.4 533,937 - -0.8 533,937 - -0.1 533,965 + +0.2 533,966 - +0.4 533,984 - -0.0 533,993 + +1.1 533,994 - +0.2 533,998 + +0.2 534,004 + -0.6 534,005 - +0.3 534,005 - +0.4 534,007 - +0.4 534,007 - +0.2 534,007 - +0.5 534,007 - -0.0 534,016 - +0.8 534,016 - -0.8 534,016 - -0.2 534,120 - -0.0 534,123 + +1.2 534,124 - +0.0 534,128 + -0.4 534,128 + -1.0 534,129 - -0.2 534,130 + +0.2 534,130 + +0.0 534,130 + +0.1 534,130 + +0.3 534,131 - +0.9 534,131 - +0.7 534,131 - -0.5 534,131 - +1.0 534,131 - +1.1 534,131 - +0.4 534,131 - +0.2 534,131 - +0.5 534,131 - +0.9 534,134 + +0.4 534,134 + +0.4 534,134 + +0.8 534,135 - -0.3 534,164 + -0.4 534,165 - +0.2 534,379 + -0.4 534,379 + +0.1 534,380 - +0.2 534,380 - +0.9 534,447 + +0.1 534,447 + -0.3 534,447 + -0.9 534,448 - -1.3 534,448 - +0.6 534,579 + IAI46_02490 0.20 -0.8 534,591 + IAI46_02490 0.21 -0.5 534,591 + IAI46_02490 0.21 +0.7 534,592 - IAI46_02490 0.22 +1.0 534,738 + IAI46_02490 0.36 -2.4 534,739 - IAI46_02490 0.36 +0.9 534,837 + IAI46_02490 0.45 +0.2 534,837 + IAI46_02490 0.45 +0.4 534,838 - IAI46_02490 0.45 +0.4 534,838 - IAI46_02490 0.45 -0.3 534,838 - IAI46_02490 0.45 +0.5 534,838 - IAI46_02490 0.45 +0.0 534,971 + IAI46_02490 0.58 -0.0 534,971 + IAI46_02490 0.58 -0.5
Or see this region's nucleotide sequence