Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4263 and Echvi_4264 are separated by 158 nucleotides Echvi_4264 and Echvi_4265 overlap by 4 nucleotides Echvi_4265 and Echvi_4266 are separated by 509 nucleotides
Echvi_4263: Echvi_4263 - hypothetical protein, at 5,118,551 to 5,119,124
_4263
Echvi_4264: Echvi_4264 - hypothetical protein, at 5,119,283 to 5,119,975
_4264
Echvi_4265: Echvi_4265 - hypothetical protein, at 5,119,972 to 5,120,103
_4265
Echvi_4266: Echvi_4266 - Uncharacterized conserved protein, at 5,120,613 to 5,121,113
_4266
Position (kb)
5119
5120
5121 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5118.978 kb on + strand, within Echvi_4263 at 5118.978 kb on + strand, within Echvi_4263 at 5119.089 kb on + strand at 5119.089 kb on + strand at 5119.153 kb on - strand at 5119.153 kb on - strand at 5119.274 kb on + strand at 5119.275 kb on - strand at 5119.275 kb on - strand at 5119.341 kb on + strand at 5119.342 kb on - strand at 5119.346 kb on - strand at 5119.346 kb on - strand at 5119.545 kb on + strand, within Echvi_4264 at 5119.563 kb on + strand, within Echvi_4264 at 5119.563 kb on + strand, within Echvi_4264 at 5119.564 kb on - strand, within Echvi_4264 at 5119.567 kb on + strand, within Echvi_4264 at 5119.567 kb on + strand, within Echvi_4264 at 5119.567 kb on + strand, within Echvi_4264 at 5119.567 kb on + strand, within Echvi_4264 at 5119.568 kb on - strand, within Echvi_4264 at 5119.609 kb on + strand, within Echvi_4264 at 5119.609 kb on + strand, within Echvi_4264 at 5119.609 kb on + strand, within Echvi_4264 at 5119.610 kb on - strand, within Echvi_4264 at 5119.632 kb on + strand, within Echvi_4264 at 5119.633 kb on - strand, within Echvi_4264 at 5119.759 kb on + strand, within Echvi_4264 at 5119.775 kb on - strand, within Echvi_4264 at 5119.820 kb on + strand, within Echvi_4264 at 5119.821 kb on - strand, within Echvi_4264 at 5119.850 kb on + strand, within Echvi_4264 at 5119.852 kb on + strand, within Echvi_4264 at 5119.852 kb on + strand, within Echvi_4264 at 5119.852 kb on + strand, within Echvi_4264 at 5119.996 kb on + strand, within Echvi_4265 at 5119.996 kb on + strand, within Echvi_4265 at 5120.005 kb on + strand, within Echvi_4265 at 5120.106 kb on + strand at 5120.106 kb on + strand at 5120.107 kb on - strand at 5120.107 kb on - strand at 5120.119 kb on + strand at 5120.128 kb on - strand at 5120.128 kb on - strand at 5120.128 kb on - strand at 5120.130 kb on - strand at 5120.132 kb on + strand at 5120.173 kb on + strand at 5120.215 kb on - strand at 5120.218 kb on - strand at 5120.261 kb on - strand at 5120.263 kb on + strand at 5120.263 kb on + strand at 5120.264 kb on - strand at 5120.264 kb on - strand at 5120.432 kb on + strand at 5120.442 kb on + strand at 5120.442 kb on + strand at 5120.442 kb on + strand at 5120.442 kb on + strand at 5120.473 kb on + strand at 5120.474 kb on - strand at 5120.480 kb on + strand at 5120.593 kb on + strand at 5120.621 kb on + strand at 5120.673 kb on - strand, within Echvi_4266 at 5120.690 kb on + strand, within Echvi_4266 at 5120.690 kb on + strand, within Echvi_4266 at 5120.691 kb on - strand, within Echvi_4266 at 5120.798 kb on + strand, within Echvi_4266 at 5120.799 kb on - strand, within Echvi_4266 at 5120.848 kb on - strand, within Echvi_4266 at 5120.858 kb on + strand, within Echvi_4266 at 5120.866 kb on + strand, within Echvi_4266 at 5120.876 kb on + strand, within Echvi_4266 at 5120.904 kb on + strand, within Echvi_4266 at 5120.904 kb on + strand, within Echvi_4266 at 5120.905 kb on - strand, within Echvi_4266 at 5120.960 kb on + strand, within Echvi_4266 at 5120.961 kb on - strand, within Echvi_4266 at 5120.961 kb on - strand, within Echvi_4266 at 5120.965 kb on + strand, within Echvi_4266 at 5120.965 kb on + strand, within Echvi_4266 at 5121.022 kb on - strand, within Echvi_4266 at 5121.048 kb on - strand, within Echvi_4266 at 5121.062 kb on + strand, within Echvi_4266 at 5121.062 kb on + strand, within Echvi_4266 at 5121.063 kb on - strand, within Echvi_4266 at 5121.063 kb on - strand, within Echvi_4266 at 5121.066 kb on - strand at 5121.066 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 5,118,978 + Echvi_4263 0.74 +0.1 5,118,978 + Echvi_4263 0.74 -1.4 5,119,089 + +0.1 5,119,089 + +1.6 5,119,153 - -1.2 5,119,153 - +0.1 5,119,274 + +0.8 5,119,275 - +0.1 5,119,275 - -1.2 5,119,341 + +2.4 5,119,342 - +0.2 5,119,346 - -0.6 5,119,346 - +0.9 5,119,545 + Echvi_4264 0.38 -0.3 5,119,563 + Echvi_4264 0.40 -2.2 5,119,563 + Echvi_4264 0.40 -0.5 5,119,564 - Echvi_4264 0.41 -0.5 5,119,567 + Echvi_4264 0.41 -0.6 5,119,567 + Echvi_4264 0.41 -0.0 5,119,567 + Echvi_4264 0.41 -0.4 5,119,567 + Echvi_4264 0.41 -0.2 5,119,568 - Echvi_4264 0.41 +0.3 5,119,609 + Echvi_4264 0.47 -1.6 5,119,609 + Echvi_4264 0.47 -0.6 5,119,609 + Echvi_4264 0.47 +1.5 5,119,610 - Echvi_4264 0.47 +0.8 5,119,632 + Echvi_4264 0.50 +0.7 5,119,633 - Echvi_4264 0.51 +0.9 5,119,759 + Echvi_4264 0.69 -0.2 5,119,775 - Echvi_4264 0.71 +0.4 5,119,820 + Echvi_4264 0.77 +0.1 5,119,821 - Echvi_4264 0.78 +0.7 5,119,850 + Echvi_4264 0.82 +0.4 5,119,852 + Echvi_4264 0.82 +0.6 5,119,852 + Echvi_4264 0.82 -0.7 5,119,852 + Echvi_4264 0.82 -0.6 5,119,996 + Echvi_4265 0.18 +0.5 5,119,996 + Echvi_4265 0.18 +0.3 5,120,005 + Echvi_4265 0.25 +1.4 5,120,106 + +0.4 5,120,106 + -0.5 5,120,107 - +0.7 5,120,107 - -0.1 5,120,119 + +0.0 5,120,128 - +0.1 5,120,128 - -0.1 5,120,128 - +0.6 5,120,130 - -0.6 5,120,132 + +1.0 5,120,173 + +0.1 5,120,215 - -1.2 5,120,218 - -0.1 5,120,261 - +0.6 5,120,263 + -0.1 5,120,263 + +2.1 5,120,264 - -3.0 5,120,264 - +0.3 5,120,432 + -0.6 5,120,442 + -0.3 5,120,442 + -0.8 5,120,442 + +2.4 5,120,442 + -1.9 5,120,473 + -0.2 5,120,474 - +0.7 5,120,480 + -1.2 5,120,593 + +0.9 5,120,621 + +0.2 5,120,673 - Echvi_4266 0.12 -1.2 5,120,690 + Echvi_4266 0.15 -0.1 5,120,690 + Echvi_4266 0.15 +0.0 5,120,691 - Echvi_4266 0.16 +0.8 5,120,798 + Echvi_4266 0.37 -1.8 5,120,799 - Echvi_4266 0.37 -0.5 5,120,848 - Echvi_4266 0.47 -0.3 5,120,858 + Echvi_4266 0.49 -0.2 5,120,866 + Echvi_4266 0.50 -0.1 5,120,876 + Echvi_4266 0.52 +0.7 5,120,904 + Echvi_4266 0.58 +0.2 5,120,904 + Echvi_4266 0.58 -0.1 5,120,905 - Echvi_4266 0.58 +0.4 5,120,960 + Echvi_4266 0.69 +0.8 5,120,961 - Echvi_4266 0.69 -0.5 5,120,961 - Echvi_4266 0.69 -0.7 5,120,965 + Echvi_4266 0.70 +0.2 5,120,965 + Echvi_4266 0.70 +1.4 5,121,022 - Echvi_4266 0.82 -0.3 5,121,048 - Echvi_4266 0.87 +0.2 5,121,062 + Echvi_4266 0.90 -1.0 5,121,062 + Echvi_4266 0.90 -0.4 5,121,063 - Echvi_4266 0.90 +0.7 5,121,063 - Echvi_4266 0.90 +1.0 5,121,066 - +0.1 5,121,066 - -0.4
Or see this region's nucleotide sequence