Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3731 and Echvi_3732 are separated by 140 nucleotides Echvi_3732 and Echvi_3733 are separated by 12 nucleotides
Echvi_3731: Echvi_3731 - D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4), at 4,438,171 to 4,439,466
_3731
Echvi_3732: Echvi_3732 - hypothetical protein, at 4,439,607 to 4,441,019
_3732
Echvi_3733: Echvi_3733 - TonB-linked outer membrane protein, SusC/RagA family, at 4,441,032 to 4,444,127
_3733
Position (kb)
4439
4440
4441
4442 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4438.619 kb on - strand, within Echvi_3731 at 4438.670 kb on + strand, within Echvi_3731 at 4438.671 kb on - strand, within Echvi_3731 at 4438.743 kb on + strand, within Echvi_3731 at 4438.744 kb on - strand, within Echvi_3731 at 4438.761 kb on + strand, within Echvi_3731 at 4438.863 kb on + strand, within Echvi_3731 at 4438.864 kb on - strand, within Echvi_3731 at 4438.864 kb on - strand, within Echvi_3731 at 4438.864 kb on - strand, within Echvi_3731 at 4438.901 kb on - strand, within Echvi_3731 at 4438.905 kb on + strand, within Echvi_3731 at 4438.906 kb on - strand, within Echvi_3731 at 4438.906 kb on - strand, within Echvi_3731 at 4438.907 kb on - strand, within Echvi_3731 at 4438.998 kb on - strand, within Echvi_3731 at 4439.030 kb on + strand, within Echvi_3731 at 4439.030 kb on + strand, within Echvi_3731 at 4439.033 kb on + strand, within Echvi_3731 at 4439.066 kb on + strand, within Echvi_3731 at 4439.066 kb on + strand, within Echvi_3731 at 4439.099 kb on + strand, within Echvi_3731 at 4439.100 kb on - strand, within Echvi_3731 at 4439.216 kb on + strand, within Echvi_3731 at 4439.251 kb on - strand, within Echvi_3731 at 4439.252 kb on + strand, within Echvi_3731 at 4439.252 kb on + strand, within Echvi_3731 at 4439.252 kb on + strand, within Echvi_3731 at 4439.253 kb on - strand, within Echvi_3731 at 4439.253 kb on - strand, within Echvi_3731 at 4439.262 kb on - strand, within Echvi_3731 at 4439.300 kb on + strand, within Echvi_3731 at 4439.300 kb on + strand, within Echvi_3731 at 4439.300 kb on + strand, within Echvi_3731 at 4439.304 kb on + strand, within Echvi_3731 at 4439.305 kb on - strand, within Echvi_3731 at 4439.321 kb on + strand, within Echvi_3731 at 4439.322 kb on - strand, within Echvi_3731 at 4439.322 kb on - strand, within Echvi_3731 at 4439.355 kb on + strand at 4439.356 kb on - strand at 4439.356 kb on - strand at 4439.356 kb on - strand at 4439.356 kb on - strand at 4439.453 kb on - strand at 4439.491 kb on + strand at 4439.519 kb on + strand at 4439.519 kb on + strand at 4439.537 kb on + strand at 4439.537 kb on + strand at 4439.537 kb on + strand at 4439.571 kb on + strand at 4439.571 kb on + strand at 4439.578 kb on - strand at 4439.591 kb on + strand at 4439.591 kb on + strand at 4439.592 kb on - strand at 4439.608 kb on + strand at 4439.626 kb on - strand at 4439.729 kb on + strand at 4439.730 kb on - strand at 4439.756 kb on + strand, within Echvi_3732 at 4439.756 kb on + strand, within Echvi_3732 at 4439.756 kb on + strand, within Echvi_3732 at 4439.756 kb on + strand, within Echvi_3732 at 4439.757 kb on - strand, within Echvi_3732 at 4439.758 kb on + strand, within Echvi_3732 at 4439.832 kb on + strand, within Echvi_3732 at 4439.832 kb on + strand, within Echvi_3732 at 4439.832 kb on + strand, within Echvi_3732 at 4439.833 kb on - strand, within Echvi_3732 at 4439.833 kb on - strand, within Echvi_3732 at 4439.833 kb on - strand, within Echvi_3732 at 4439.833 kb on - strand, within Echvi_3732 at 4439.916 kb on + strand, within Echvi_3732 at 4439.916 kb on + strand, within Echvi_3732 at 4439.916 kb on + strand, within Echvi_3732 at 4439.917 kb on - strand, within Echvi_3732 at 4439.921 kb on + strand, within Echvi_3732 at 4439.922 kb on - strand, within Echvi_3732 at 4439.922 kb on - strand, within Echvi_3732 at 4439.928 kb on - strand, within Echvi_3732 at 4439.950 kb on + strand, within Echvi_3732 at 4439.973 kb on - strand, within Echvi_3732 at 4440.020 kb on - strand, within Echvi_3732 at 4440.053 kb on + strand, within Echvi_3732 at 4440.053 kb on + strand, within Echvi_3732 at 4440.055 kb on + strand, within Echvi_3732 at 4440.055 kb on + strand, within Echvi_3732 at 4440.056 kb on - strand, within Echvi_3732 at 4440.058 kb on + strand, within Echvi_3732 at 4440.058 kb on + strand, within Echvi_3732 at 4440.058 kb on + strand, within Echvi_3732 at 4440.059 kb on - strand, within Echvi_3732 at 4440.153 kb on - strand, within Echvi_3732 at 4440.320 kb on + strand, within Echvi_3732 at 4440.320 kb on + strand, within Echvi_3732 at 4440.374 kb on + strand, within Echvi_3732 at 4440.375 kb on - strand, within Echvi_3732 at 4440.376 kb on + strand, within Echvi_3732 at 4440.386 kb on + strand, within Echvi_3732 at 4440.386 kb on + strand, within Echvi_3732 at 4440.387 kb on - strand, within Echvi_3732 at 4440.405 kb on - strand, within Echvi_3732 at 4440.465 kb on - strand, within Echvi_3732 at 4440.529 kb on + strand, within Echvi_3732 at 4440.569 kb on - strand, within Echvi_3732 at 4440.642 kb on + strand, within Echvi_3732 at 4440.647 kb on + strand, within Echvi_3732 at 4440.740 kb on + strand, within Echvi_3732 at 4440.740 kb on + strand, within Echvi_3732 at 4440.742 kb on + strand, within Echvi_3732 at 4440.742 kb on + strand, within Echvi_3732 at 4440.742 kb on + strand, within Echvi_3732 at 4440.742 kb on + strand, within Echvi_3732 at 4440.742 kb on + strand, within Echvi_3732 at 4440.743 kb on - strand, within Echvi_3732 at 4440.772 kb on - strand, within Echvi_3732 at 4440.791 kb on + strand, within Echvi_3732 at 4440.798 kb on - strand, within Echvi_3732 at 4440.798 kb on - strand, within Echvi_3732 at 4440.820 kb on + strand, within Echvi_3732 at 4440.821 kb on - strand, within Echvi_3732 at 4440.830 kb on - strand, within Echvi_3732 at 4440.839 kb on + strand, within Echvi_3732 at 4440.857 kb on - strand, within Echvi_3732 at 4440.860 kb on + strand, within Echvi_3732 at 4440.860 kb on + strand, within Echvi_3732 at 4440.861 kb on - strand, within Echvi_3732 at 4440.861 kb on - strand, within Echvi_3732 at 4440.861 kb on - strand, within Echvi_3732 at 4440.861 kb on - strand, within Echvi_3732 at 4440.861 kb on - strand, within Echvi_3732 at 4440.861 kb on - strand, within Echvi_3732 at 4440.864 kb on + strand, within Echvi_3732 at 4440.865 kb on - strand, within Echvi_3732 at 4440.865 kb on - strand, within Echvi_3732 at 4440.865 kb on - strand, within Echvi_3732 at 4440.865 kb on - strand, within Echvi_3732 at 4440.877 kb on + strand, within Echvi_3732 at 4440.997 kb on + strand at 4440.998 kb on - strand at 4441.001 kb on + strand at 4441.001 kb on + strand at 4441.001 kb on + strand at 4441.001 kb on + strand at 4441.001 kb on + strand at 4441.001 kb on + strand at 4441.001 kb on + strand at 4441.002 kb on - strand at 4441.002 kb on - strand at 4441.004 kb on - strand at 4441.004 kb on - strand at 4441.008 kb on - strand at 4441.008 kb on - strand at 4441.029 kb on + strand at 4441.029 kb on + strand at 4441.041 kb on + strand at 4441.042 kb on - strand at 4441.052 kb on + strand at 4441.164 kb on + strand at 4441.165 kb on - strand at 4441.165 kb on - strand at 4441.170 kb on - strand at 4441.182 kb on + strand at 4441.182 kb on + strand at 4441.183 kb on - strand at 4441.203 kb on - strand at 4441.309 kb on + strand at 4441.313 kb on + strand at 4441.313 kb on + strand at 4441.314 kb on - strand at 4441.368 kb on + strand, within Echvi_3733 at 4441.369 kb on - strand, within Echvi_3733 at 4441.369 kb on - strand, within Echvi_3733 at 4441.369 kb on - strand, within Echvi_3733 at 4441.407 kb on + strand, within Echvi_3733 at 4441.408 kb on - strand, within Echvi_3733 at 4441.445 kb on + strand, within Echvi_3733 at 4441.447 kb on + strand, within Echvi_3733 at 4441.448 kb on - strand, within Echvi_3733 at 4441.470 kb on + strand, within Echvi_3733 at 4441.470 kb on + strand, within Echvi_3733 at 4441.493 kb on - strand, within Echvi_3733 at 4441.493 kb on - strand, within Echvi_3733 at 4441.562 kb on + strand, within Echvi_3733 at 4441.649 kb on + strand, within Echvi_3733 at 4441.693 kb on + strand, within Echvi_3733 at 4441.694 kb on - strand, within Echvi_3733 at 4441.694 kb on - strand, within Echvi_3733 at 4441.710 kb on - strand, within Echvi_3733 at 4441.714 kb on + strand, within Echvi_3733 at 4441.714 kb on + strand, within Echvi_3733 at 4441.715 kb on - strand, within Echvi_3733 at 4441.715 kb on - strand, within Echvi_3733 at 4441.722 kb on - strand, within Echvi_3733 at 4441.722 kb on - strand, within Echvi_3733 at 4441.760 kb on + strand, within Echvi_3733 at 4441.788 kb on + strand, within Echvi_3733 at 4441.788 kb on + strand, within Echvi_3733 at 4441.821 kb on + strand, within Echvi_3733 at 4441.848 kb on - strand, within Echvi_3733 at 4441.868 kb on + strand, within Echvi_3733 at 4441.868 kb on + strand, within Echvi_3733 at 4441.869 kb on - strand, within Echvi_3733 at 4441.889 kb on + strand, within Echvi_3733 at 4441.890 kb on - strand, within Echvi_3733 at 4441.912 kb on - strand, within Echvi_3733 at 4441.946 kb on + strand, within Echvi_3733 at 4441.946 kb on + strand, within Echvi_3733 at 4441.946 kb on + strand, within Echvi_3733 at 4441.946 kb on + strand, within Echvi_3733 at 4441.948 kb on + strand, within Echvi_3733 at 4441.948 kb on + strand, within Echvi_3733 at 4441.948 kb on + strand, within Echvi_3733 at 4441.948 kb on + strand, within Echvi_3733 at 4441.994 kb on + strand, within Echvi_3733 at 4441.994 kb on + strand, within Echvi_3733 at 4441.995 kb on - strand, within Echvi_3733 at 4442.012 kb on + strand, within Echvi_3733 at 4442.012 kb on + strand, within Echvi_3733 at 4442.017 kb on + strand, within Echvi_3733
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,438,619 - Echvi_3731 0.35 -1.9 4,438,670 + Echvi_3731 0.39 -1.4 4,438,671 - Echvi_3731 0.39 +0.1 4,438,743 + Echvi_3731 0.44 +0.6 4,438,744 - Echvi_3731 0.44 +0.8 4,438,761 + Echvi_3731 0.46 +0.4 4,438,863 + Echvi_3731 0.53 -0.4 4,438,864 - Echvi_3731 0.53 -1.8 4,438,864 - Echvi_3731 0.53 +0.7 4,438,864 - Echvi_3731 0.53 -0.9 4,438,901 - Echvi_3731 0.56 -0.8 4,438,905 + Echvi_3731 0.57 -1.3 4,438,906 - Echvi_3731 0.57 -0.9 4,438,906 - Echvi_3731 0.57 -0.5 4,438,907 - Echvi_3731 0.57 +0.4 4,438,998 - Echvi_3731 0.64 -0.2 4,439,030 + Echvi_3731 0.66 -0.1 4,439,030 + Echvi_3731 0.66 +0.9 4,439,033 + Echvi_3731 0.67 -0.7 4,439,066 + Echvi_3731 0.69 +0.9 4,439,066 + Echvi_3731 0.69 +1.1 4,439,099 + Echvi_3731 0.72 +1.1 4,439,100 - Echvi_3731 0.72 +0.4 4,439,216 + Echvi_3731 0.81 +0.9 4,439,251 - Echvi_3731 0.83 -0.0 4,439,252 + Echvi_3731 0.83 -0.2 4,439,252 + Echvi_3731 0.83 -0.0 4,439,252 + Echvi_3731 0.83 -1.2 4,439,253 - Echvi_3731 0.83 -0.1 4,439,253 - Echvi_3731 0.83 -1.4 4,439,262 - Echvi_3731 0.84 +0.0 4,439,300 + Echvi_3731 0.87 +0.4 4,439,300 + Echvi_3731 0.87 -0.3 4,439,300 + Echvi_3731 0.87 +0.3 4,439,304 + Echvi_3731 0.87 +0.9 4,439,305 - Echvi_3731 0.88 +1.1 4,439,321 + Echvi_3731 0.89 -0.2 4,439,322 - Echvi_3731 0.89 -1.7 4,439,322 - Echvi_3731 0.89 +0.4 4,439,355 + -1.5 4,439,356 - -0.1 4,439,356 - +0.2 4,439,356 - +2.3 4,439,356 - -0.4 4,439,453 - +0.3 4,439,491 + -1.0 4,439,519 + -1.2 4,439,519 + -0.3 4,439,537 + -1.4 4,439,537 + -0.3 4,439,537 + +0.3 4,439,571 + -0.3 4,439,571 + +0.9 4,439,578 - -0.8 4,439,591 + -1.0 4,439,591 + -0.3 4,439,592 - +0.7 4,439,608 + -0.4 4,439,626 - +0.0 4,439,729 + +0.3 4,439,730 - +0.9 4,439,756 + Echvi_3732 0.11 -0.3 4,439,756 + Echvi_3732 0.11 -0.4 4,439,756 + Echvi_3732 0.11 -1.6 4,439,756 + Echvi_3732 0.11 -1.8 4,439,757 - Echvi_3732 0.11 +0.4 4,439,758 + Echvi_3732 0.11 -1.3 4,439,832 + Echvi_3732 0.16 -1.0 4,439,832 + Echvi_3732 0.16 +0.8 4,439,832 + Echvi_3732 0.16 -0.7 4,439,833 - Echvi_3732 0.16 -1.0 4,439,833 - Echvi_3732 0.16 -0.9 4,439,833 - Echvi_3732 0.16 -0.1 4,439,833 - Echvi_3732 0.16 +1.1 4,439,916 + Echvi_3732 0.22 +0.0 4,439,916 + Echvi_3732 0.22 -0.4 4,439,916 + Echvi_3732 0.22 +0.2 4,439,917 - Echvi_3732 0.22 +0.1 4,439,921 + Echvi_3732 0.22 -1.5 4,439,922 - Echvi_3732 0.22 -2.0 4,439,922 - Echvi_3732 0.22 +1.9 4,439,928 - Echvi_3732 0.23 +0.6 4,439,950 + Echvi_3732 0.24 -2.5 4,439,973 - Echvi_3732 0.26 -0.6 4,440,020 - Echvi_3732 0.29 -0.2 4,440,053 + Echvi_3732 0.32 -1.5 4,440,053 + Echvi_3732 0.32 -0.9 4,440,055 + Echvi_3732 0.32 +1.2 4,440,055 + Echvi_3732 0.32 +0.2 4,440,056 - Echvi_3732 0.32 +0.1 4,440,058 + Echvi_3732 0.32 -0.6 4,440,058 + Echvi_3732 0.32 +1.2 4,440,058 + Echvi_3732 0.32 -0.2 4,440,059 - Echvi_3732 0.32 -0.5 4,440,153 - Echvi_3732 0.39 +0.2 4,440,320 + Echvi_3732 0.50 -0.5 4,440,320 + Echvi_3732 0.50 -0.3 4,440,374 + Echvi_3732 0.54 +0.3 4,440,375 - Echvi_3732 0.54 +1.1 4,440,376 + Echvi_3732 0.54 -0.2 4,440,386 + Echvi_3732 0.55 +0.4 4,440,386 + Echvi_3732 0.55 -0.4 4,440,387 - Echvi_3732 0.55 -1.4 4,440,405 - Echvi_3732 0.56 -0.3 4,440,465 - Echvi_3732 0.61 +0.6 4,440,529 + Echvi_3732 0.65 -0.3 4,440,569 - Echvi_3732 0.68 +0.0 4,440,642 + Echvi_3732 0.73 -1.3 4,440,647 + Echvi_3732 0.74 -0.1 4,440,740 + Echvi_3732 0.80 -0.6 4,440,740 + Echvi_3732 0.80 +0.3 4,440,742 + Echvi_3732 0.80 -1.6 4,440,742 + Echvi_3732 0.80 -1.1 4,440,742 + Echvi_3732 0.80 -0.8 4,440,742 + Echvi_3732 0.80 -0.2 4,440,742 + Echvi_3732 0.80 -1.1 4,440,743 - Echvi_3732 0.80 -0.3 4,440,772 - Echvi_3732 0.82 -0.5 4,440,791 + Echvi_3732 0.84 +2.9 4,440,798 - Echvi_3732 0.84 -0.2 4,440,798 - Echvi_3732 0.84 +0.6 4,440,820 + Echvi_3732 0.86 +0.1 4,440,821 - Echvi_3732 0.86 +0.0 4,440,830 - Echvi_3732 0.87 -1.7 4,440,839 + Echvi_3732 0.87 -0.0 4,440,857 - Echvi_3732 0.88 -1.8 4,440,860 + Echvi_3732 0.89 -0.2 4,440,860 + Echvi_3732 0.89 +0.4 4,440,861 - Echvi_3732 0.89 +0.6 4,440,861 - Echvi_3732 0.89 -1.1 4,440,861 - Echvi_3732 0.89 -1.4 4,440,861 - Echvi_3732 0.89 +0.2 4,440,861 - Echvi_3732 0.89 -0.2 4,440,861 - Echvi_3732 0.89 -0.2 4,440,864 + Echvi_3732 0.89 +0.4 4,440,865 - Echvi_3732 0.89 +0.5 4,440,865 - Echvi_3732 0.89 -0.0 4,440,865 - Echvi_3732 0.89 +0.2 4,440,865 - Echvi_3732 0.89 -1.1 4,440,877 + Echvi_3732 0.90 -0.0 4,440,997 + -0.3 4,440,998 - +0.2 4,441,001 + +0.1 4,441,001 + +1.0 4,441,001 + -1.0 4,441,001 + -0.8 4,441,001 + +0.3 4,441,001 + -0.4 4,441,001 + -0.4 4,441,002 - +1.0 4,441,002 - +0.1 4,441,004 - -0.0 4,441,004 - -0.2 4,441,008 - +0.7 4,441,008 - -0.5 4,441,029 + +0.3 4,441,029 + +1.3 4,441,041 + +0.7 4,441,042 - -1.7 4,441,052 + +0.8 4,441,164 + +0.3 4,441,165 - +0.3 4,441,165 - +0.1 4,441,170 - -0.4 4,441,182 + +0.3 4,441,182 + +0.5 4,441,183 - +0.3 4,441,203 - -1.1 4,441,309 + -0.1 4,441,313 + +0.4 4,441,313 + -0.2 4,441,314 - +0.1 4,441,368 + Echvi_3733 0.11 +1.1 4,441,369 - Echvi_3733 0.11 -1.6 4,441,369 - Echvi_3733 0.11 -0.6 4,441,369 - Echvi_3733 0.11 -1.5 4,441,407 + Echvi_3733 0.12 +0.1 4,441,408 - Echvi_3733 0.12 -0.4 4,441,445 + Echvi_3733 0.13 +0.2 4,441,447 + Echvi_3733 0.13 +0.8 4,441,448 - Echvi_3733 0.13 +0.5 4,441,470 + Echvi_3733 0.14 +0.2 4,441,470 + Echvi_3733 0.14 +0.3 4,441,493 - Echvi_3733 0.15 +1.6 4,441,493 - Echvi_3733 0.15 +2.0 4,441,562 + Echvi_3733 0.17 -0.6 4,441,649 + Echvi_3733 0.20 -0.3 4,441,693 + Echvi_3733 0.21 -0.1 4,441,694 - Echvi_3733 0.21 -0.5 4,441,694 - Echvi_3733 0.21 +0.7 4,441,710 - Echvi_3733 0.22 +0.6 4,441,714 + Echvi_3733 0.22 -1.9 4,441,714 + Echvi_3733 0.22 +0.3 4,441,715 - Echvi_3733 0.22 +0.3 4,441,715 - Echvi_3733 0.22 -2.8 4,441,722 - Echvi_3733 0.22 +0.7 4,441,722 - Echvi_3733 0.22 +1.3 4,441,760 + Echvi_3733 0.24 +0.5 4,441,788 + Echvi_3733 0.24 +0.7 4,441,788 + Echvi_3733 0.24 +0.6 4,441,821 + Echvi_3733 0.25 -1.4 4,441,848 - Echvi_3733 0.26 -1.4 4,441,868 + Echvi_3733 0.27 -0.5 4,441,868 + Echvi_3733 0.27 +0.1 4,441,869 - Echvi_3733 0.27 -0.2 4,441,889 + Echvi_3733 0.28 +0.7 4,441,890 - Echvi_3733 0.28 +0.1 4,441,912 - Echvi_3733 0.28 -0.3 4,441,946 + Echvi_3733 0.30 -0.6 4,441,946 + Echvi_3733 0.30 +0.5 4,441,946 + Echvi_3733 0.30 -1.1 4,441,946 + Echvi_3733 0.30 -0.2 4,441,948 + Echvi_3733 0.30 -0.5 4,441,948 + Echvi_3733 0.30 -0.4 4,441,948 + Echvi_3733 0.30 -1.8 4,441,948 + Echvi_3733 0.30 +0.6 4,441,994 + Echvi_3733 0.31 -2.8 4,441,994 + Echvi_3733 0.31 -1.4 4,441,995 - Echvi_3733 0.31 +0.1 4,442,012 + Echvi_3733 0.32 -0.2 4,442,012 + Echvi_3733 0.32 -0.4 4,442,017 + Echvi_3733 0.32 -0.8
Or see this region's nucleotide sequence