Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3567 and Echvi_3568 are separated by 86 nucleotides Echvi_3568 and Echvi_3569 are separated by 353 nucleotides Echvi_3569 and Echvi_3570 are separated by 54 nucleotides
Echvi_3567: Echvi_3567 - thiamine biosynthesis protein ThiC, at 4,225,789 to 4,227,660
_3567
Echvi_3568: Echvi_3568 - thiamine biosynthesis protein ThiS, at 4,227,747 to 4,227,953
_3568
Echvi_3569: Echvi_3569 - Uncharacterized proteins of the AP superfamily, at 4,228,307 to 4,229,563
_3569
Echvi_3570: Echvi_3570 - hypothetical protein, at 4,229,618 to 4,230,289
_3570
Position (kb)
4228
4229
4230 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4227.307 kb on - strand, within Echvi_3567 at 4227.341 kb on + strand, within Echvi_3567 at 4227.341 kb on + strand, within Echvi_3567 at 4227.361 kb on + strand, within Echvi_3567 at 4227.361 kb on + strand, within Echvi_3567 at 4227.424 kb on + strand, within Echvi_3567 at 4227.430 kb on + strand, within Echvi_3567 at 4227.430 kb on + strand, within Echvi_3567 at 4227.430 kb on + strand, within Echvi_3567 at 4227.430 kb on + strand, within Echvi_3567 at 4227.431 kb on - strand, within Echvi_3567 at 4227.431 kb on - strand, within Echvi_3567 at 4227.431 kb on - strand, within Echvi_3567 at 4227.451 kb on - strand, within Echvi_3567 at 4227.452 kb on + strand, within Echvi_3567 at 4227.452 kb on + strand, within Echvi_3567 at 4227.471 kb on - strand, within Echvi_3567 at 4227.471 kb on - strand, within Echvi_3567 at 4227.523 kb on + strand at 4227.584 kb on - strand at 4227.588 kb on - strand at 4227.588 kb on - strand at 4227.589 kb on + strand at 4227.622 kb on - strand at 4227.626 kb on + strand at 4227.626 kb on + strand at 4227.626 kb on + strand at 4227.627 kb on - strand at 4227.627 kb on - strand at 4227.627 kb on - strand at 4227.664 kb on - strand at 4227.997 kb on + strand at 4228.062 kb on - strand at 4228.078 kb on - strand at 4228.082 kb on + strand at 4228.083 kb on - strand at 4228.114 kb on + strand at 4228.115 kb on - strand at 4228.123 kb on - strand at 4228.123 kb on - strand at 4228.148 kb on + strand at 4228.155 kb on - strand at 4228.175 kb on + strand at 4228.188 kb on + strand at 4228.189 kb on - strand at 4228.200 kb on + strand at 4228.200 kb on + strand at 4228.201 kb on - strand at 4228.242 kb on + strand at 4228.242 kb on + strand at 4228.271 kb on + strand at 4228.272 kb on - strand at 4228.274 kb on + strand at 4228.275 kb on - strand at 4228.275 kb on - strand at 4228.277 kb on - strand at 4228.277 kb on - strand at 4228.309 kb on - strand at 4228.321 kb on + strand at 4228.321 kb on + strand at 4228.321 kb on + strand at 4228.473 kb on + strand, within Echvi_3569 at 4228.539 kb on + strand, within Echvi_3569 at 4228.540 kb on - strand, within Echvi_3569 at 4228.540 kb on - strand, within Echvi_3569 at 4228.540 kb on - strand, within Echvi_3569 at 4228.540 kb on - strand, within Echvi_3569 at 4228.610 kb on - strand, within Echvi_3569 at 4228.616 kb on + strand, within Echvi_3569 at 4228.616 kb on + strand, within Echvi_3569 at 4228.617 kb on - strand, within Echvi_3569 at 4228.688 kb on - strand, within Echvi_3569 at 4228.775 kb on - strand, within Echvi_3569 at 4228.780 kb on - strand, within Echvi_3569 at 4228.782 kb on + strand, within Echvi_3569 at 4228.874 kb on - strand, within Echvi_3569 at 4228.874 kb on - strand, within Echvi_3569 at 4228.874 kb on - strand, within Echvi_3569 at 4228.938 kb on - strand, within Echvi_3569 at 4228.952 kb on + strand, within Echvi_3569 at 4228.978 kb on - strand, within Echvi_3569 at 4228.978 kb on - strand, within Echvi_3569 at 4228.978 kb on - strand, within Echvi_3569 at 4228.978 kb on - strand, within Echvi_3569 at 4228.981 kb on + strand, within Echvi_3569 at 4228.981 kb on + strand, within Echvi_3569 at 4228.982 kb on - strand, within Echvi_3569 at 4228.982 kb on - strand, within Echvi_3569 at 4228.982 kb on - strand, within Echvi_3569 at 4228.982 kb on - strand, within Echvi_3569 at 4228.982 kb on - strand, within Echvi_3569 at 4228.982 kb on - strand, within Echvi_3569 at 4228.982 kb on - strand, within Echvi_3569 at 4229.011 kb on - strand, within Echvi_3569 at 4229.011 kb on - strand, within Echvi_3569 at 4229.018 kb on - strand, within Echvi_3569 at 4229.052 kb on - strand, within Echvi_3569 at 4229.072 kb on + strand, within Echvi_3569 at 4229.109 kb on + strand, within Echvi_3569 at 4229.110 kb on - strand, within Echvi_3569 at 4229.112 kb on + strand, within Echvi_3569 at 4229.112 kb on + strand, within Echvi_3569 at 4229.112 kb on + strand, within Echvi_3569 at 4229.115 kb on + strand, within Echvi_3569 at 4229.115 kb on + strand, within Echvi_3569 at 4229.115 kb on + strand, within Echvi_3569 at 4229.163 kb on + strand, within Echvi_3569 at 4229.269 kb on + strand, within Echvi_3569 at 4229.269 kb on + strand, within Echvi_3569 at 4229.294 kb on - strand, within Echvi_3569 at 4229.294 kb on - strand, within Echvi_3569 at 4229.420 kb on + strand, within Echvi_3569 at 4229.420 kb on + strand, within Echvi_3569 at 4229.420 kb on + strand, within Echvi_3569 at 4229.420 kb on + strand, within Echvi_3569 at 4229.420 kb on + strand, within Echvi_3569 at 4229.421 kb on - strand, within Echvi_3569 at 4229.421 kb on - strand, within Echvi_3569 at 4229.421 kb on - strand, within Echvi_3569 at 4229.422 kb on + strand, within Echvi_3569 at 4229.422 kb on + strand, within Echvi_3569 at 4229.422 kb on + strand, within Echvi_3569 at 4229.422 kb on + strand, within Echvi_3569 at 4229.423 kb on - strand, within Echvi_3569 at 4229.423 kb on - strand, within Echvi_3569 at 4229.423 kb on - strand, within Echvi_3569 at 4229.423 kb on - strand, within Echvi_3569 at 4229.446 kb on + strand at 4229.447 kb on - strand at 4229.449 kb on - strand at 4229.480 kb on + strand at 4229.480 kb on + strand at 4229.481 kb on - strand at 4229.487 kb on + strand at 4229.487 kb on + strand at 4229.488 kb on - strand at 4229.537 kb on + strand at 4229.574 kb on - strand at 4229.655 kb on - strand at 4229.655 kb on - strand at 4229.683 kb on + strand at 4229.688 kb on + strand, within Echvi_3570 at 4229.688 kb on + strand, within Echvi_3570 at 4229.689 kb on - strand, within Echvi_3570 at 4229.689 kb on - strand, within Echvi_3570 at 4229.689 kb on - strand, within Echvi_3570 at 4229.699 kb on + strand, within Echvi_3570 at 4229.699 kb on + strand, within Echvi_3570 at 4229.699 kb on + strand, within Echvi_3570 at 4229.700 kb on - strand, within Echvi_3570 at 4229.700 kb on - strand, within Echvi_3570 at 4229.700 kb on - strand, within Echvi_3570 at 4229.702 kb on - strand, within Echvi_3570 at 4229.723 kb on + strand, within Echvi_3570 at 4229.724 kb on - strand, within Echvi_3570 at 4229.724 kb on - strand, within Echvi_3570 at 4229.724 kb on - strand, within Echvi_3570 at 4229.724 kb on - strand, within Echvi_3570 at 4229.724 kb on - strand, within Echvi_3570 at 4229.724 kb on - strand, within Echvi_3570 at 4229.727 kb on + strand, within Echvi_3570 at 4229.727 kb on + strand, within Echvi_3570 at 4229.727 kb on + strand, within Echvi_3570 at 4229.727 kb on + strand, within Echvi_3570 at 4229.727 kb on + strand, within Echvi_3570 at 4229.728 kb on - strand, within Echvi_3570 at 4229.728 kb on - strand, within Echvi_3570 at 4229.728 kb on - strand, within Echvi_3570 at 4229.732 kb on + strand, within Echvi_3570 at 4229.732 kb on + strand, within Echvi_3570 at 4229.732 kb on + strand, within Echvi_3570 at 4229.732 kb on + strand, within Echvi_3570 at 4229.733 kb on - strand, within Echvi_3570 at 4229.733 kb on - strand, within Echvi_3570 at 4229.734 kb on + strand, within Echvi_3570 at 4229.734 kb on + strand, within Echvi_3570 at 4229.734 kb on + strand, within Echvi_3570 at 4229.734 kb on + strand, within Echvi_3570 at 4229.773 kb on - strand, within Echvi_3570 at 4229.906 kb on - strand, within Echvi_3570 at 4229.949 kb on - strand, within Echvi_3570 at 4229.949 kb on - strand, within Echvi_3570 at 4229.949 kb on - strand, within Echvi_3570 at 4229.970 kb on - strand, within Echvi_3570 at 4229.976 kb on + strand, within Echvi_3570 at 4229.976 kb on + strand, within Echvi_3570 at 4229.989 kb on + strand, within Echvi_3570 at 4230.021 kb on + strand, within Echvi_3570 at 4230.226 kb on - strand at 4230.226 kb on - strand at 4230.233 kb on - strand at 4230.233 kb on - strand at 4230.340 kb on - strand at 4230.379 kb on - strand at 4230.451 kb on + strand at 4230.451 kb on + strand at 4230.452 kb on - strand at 4230.490 kb on + strand at 4230.491 kb on - strand at 4230.497 kb on - strand at 4230.497 kb on - strand at 4230.516 kb on + strand at 4230.517 kb on - strand at 4230.517 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,227,307 - Echvi_3567 0.81 -0.1 4,227,341 + Echvi_3567 0.83 +0.1 4,227,341 + Echvi_3567 0.83 -2.1 4,227,361 + Echvi_3567 0.84 +0.4 4,227,361 + Echvi_3567 0.84 +0.8 4,227,424 + Echvi_3567 0.87 +0.1 4,227,430 + Echvi_3567 0.88 -0.3 4,227,430 + Echvi_3567 0.88 -0.9 4,227,430 + Echvi_3567 0.88 -0.1 4,227,430 + Echvi_3567 0.88 -0.1 4,227,431 - Echvi_3567 0.88 +0.6 4,227,431 - Echvi_3567 0.88 +1.5 4,227,431 - Echvi_3567 0.88 +0.0 4,227,451 - Echvi_3567 0.89 -0.3 4,227,452 + Echvi_3567 0.89 -0.8 4,227,452 + Echvi_3567 0.89 +0.3 4,227,471 - Echvi_3567 0.90 -1.5 4,227,471 - Echvi_3567 0.90 +0.1 4,227,523 + -0.6 4,227,584 - +0.2 4,227,588 - -1.2 4,227,588 - +0.8 4,227,589 + +0.2 4,227,622 - +1.1 4,227,626 + +0.2 4,227,626 + +0.4 4,227,626 + -0.8 4,227,627 - +0.8 4,227,627 - +0.2 4,227,627 - +0.0 4,227,664 - -1.9 4,227,997 + +0.5 4,228,062 - -0.2 4,228,078 - +0.3 4,228,082 + +2.2 4,228,083 - +0.2 4,228,114 + -0.1 4,228,115 - -0.8 4,228,123 - +0.5 4,228,123 - -1.5 4,228,148 + +1.2 4,228,155 - -1.6 4,228,175 + -0.6 4,228,188 + +0.1 4,228,189 - -0.1 4,228,200 + +0.7 4,228,200 + -0.3 4,228,201 - +1.0 4,228,242 + +0.1 4,228,242 + -2.4 4,228,271 + +0.1 4,228,272 - -0.1 4,228,274 + -0.1 4,228,275 - -1.2 4,228,275 - +0.6 4,228,277 - +0.1 4,228,277 - -0.2 4,228,309 - -0.4 4,228,321 + -0.3 4,228,321 + -0.1 4,228,321 + +0.6 4,228,473 + Echvi_3569 0.13 -0.0 4,228,539 + Echvi_3569 0.18 -0.5 4,228,540 - Echvi_3569 0.19 -0.6 4,228,540 - Echvi_3569 0.19 +0.4 4,228,540 - Echvi_3569 0.19 -0.1 4,228,540 - Echvi_3569 0.19 -0.5 4,228,610 - Echvi_3569 0.24 +1.1 4,228,616 + Echvi_3569 0.25 +1.7 4,228,616 + Echvi_3569 0.25 -0.3 4,228,617 - Echvi_3569 0.25 -1.4 4,228,688 - Echvi_3569 0.30 +0.2 4,228,775 - Echvi_3569 0.37 +1.5 4,228,780 - Echvi_3569 0.38 +0.6 4,228,782 + Echvi_3569 0.38 -1.9 4,228,874 - Echvi_3569 0.45 -0.9 4,228,874 - Echvi_3569 0.45 -0.6 4,228,874 - Echvi_3569 0.45 +3.0 4,228,938 - Echvi_3569 0.50 +0.2 4,228,952 + Echvi_3569 0.51 -0.7 4,228,978 - Echvi_3569 0.53 -1.0 4,228,978 - Echvi_3569 0.53 +1.0 4,228,978 - Echvi_3569 0.53 +0.4 4,228,978 - Echvi_3569 0.53 +0.4 4,228,981 + Echvi_3569 0.54 -0.8 4,228,981 + Echvi_3569 0.54 -0.4 4,228,982 - Echvi_3569 0.54 +0.1 4,228,982 - Echvi_3569 0.54 +0.0 4,228,982 - Echvi_3569 0.54 -2.3 4,228,982 - Echvi_3569 0.54 -0.2 4,228,982 - Echvi_3569 0.54 -1.3 4,228,982 - Echvi_3569 0.54 +1.6 4,228,982 - Echvi_3569 0.54 +0.2 4,229,011 - Echvi_3569 0.56 +0.5 4,229,011 - Echvi_3569 0.56 -1.5 4,229,018 - Echvi_3569 0.57 +0.2 4,229,052 - Echvi_3569 0.59 -1.8 4,229,072 + Echvi_3569 0.61 -1.4 4,229,109 + Echvi_3569 0.64 -0.3 4,229,110 - Echvi_3569 0.64 -1.1 4,229,112 + Echvi_3569 0.64 -0.1 4,229,112 + Echvi_3569 0.64 +1.1 4,229,112 + Echvi_3569 0.64 -3.1 4,229,115 + Echvi_3569 0.64 +0.2 4,229,115 + Echvi_3569 0.64 +0.2 4,229,115 + Echvi_3569 0.64 -0.0 4,229,163 + Echvi_3569 0.68 +0.8 4,229,269 + Echvi_3569 0.77 -2.5 4,229,269 + Echvi_3569 0.77 -0.0 4,229,294 - Echvi_3569 0.79 +1.7 4,229,294 - Echvi_3569 0.79 +0.2 4,229,420 + Echvi_3569 0.89 -0.5 4,229,420 + Echvi_3569 0.89 +0.6 4,229,420 + Echvi_3569 0.89 -1.0 4,229,420 + Echvi_3569 0.89 +0.5 4,229,420 + Echvi_3569 0.89 +0.7 4,229,421 - Echvi_3569 0.89 +0.2 4,229,421 - Echvi_3569 0.89 -0.7 4,229,421 - Echvi_3569 0.89 -0.4 4,229,422 + Echvi_3569 0.89 +0.4 4,229,422 + Echvi_3569 0.89 -0.4 4,229,422 + Echvi_3569 0.89 +1.4 4,229,422 + Echvi_3569 0.89 -0.3 4,229,423 - Echvi_3569 0.89 -1.0 4,229,423 - Echvi_3569 0.89 +0.5 4,229,423 - Echvi_3569 0.89 +0.8 4,229,423 - Echvi_3569 0.89 +0.6 4,229,446 + -0.3 4,229,447 - +0.3 4,229,449 - -0.0 4,229,480 + +0.4 4,229,480 + +1.2 4,229,481 - -0.4 4,229,487 + -0.5 4,229,487 + +0.1 4,229,488 - +0.3 4,229,537 + -0.7 4,229,574 - +0.3 4,229,655 - +0.4 4,229,655 - -0.0 4,229,683 + +0.2 4,229,688 + Echvi_3570 0.10 -0.6 4,229,688 + Echvi_3570 0.10 -0.8 4,229,689 - Echvi_3570 0.11 -1.3 4,229,689 - Echvi_3570 0.11 +0.0 4,229,689 - Echvi_3570 0.11 -0.5 4,229,699 + Echvi_3570 0.12 -0.4 4,229,699 + Echvi_3570 0.12 -1.0 4,229,699 + Echvi_3570 0.12 -1.3 4,229,700 - Echvi_3570 0.12 -0.4 4,229,700 - Echvi_3570 0.12 +0.3 4,229,700 - Echvi_3570 0.12 -1.0 4,229,702 - Echvi_3570 0.12 -0.1 4,229,723 + Echvi_3570 0.16 +2.2 4,229,724 - Echvi_3570 0.16 -0.4 4,229,724 - Echvi_3570 0.16 -0.3 4,229,724 - Echvi_3570 0.16 +0.5 4,229,724 - Echvi_3570 0.16 -0.6 4,229,724 - Echvi_3570 0.16 -1.4 4,229,724 - Echvi_3570 0.16 -0.1 4,229,727 + Echvi_3570 0.16 +1.0 4,229,727 + Echvi_3570 0.16 -1.0 4,229,727 + Echvi_3570 0.16 +1.1 4,229,727 + Echvi_3570 0.16 -0.6 4,229,727 + Echvi_3570 0.16 +1.7 4,229,728 - Echvi_3570 0.16 -0.4 4,229,728 - Echvi_3570 0.16 +0.1 4,229,728 - Echvi_3570 0.16 +0.7 4,229,732 + Echvi_3570 0.17 -0.1 4,229,732 + Echvi_3570 0.17 +0.4 4,229,732 + Echvi_3570 0.17 -0.1 4,229,732 + Echvi_3570 0.17 -1.0 4,229,733 - Echvi_3570 0.17 +0.4 4,229,733 - Echvi_3570 0.17 -0.9 4,229,734 + Echvi_3570 0.17 +0.6 4,229,734 + Echvi_3570 0.17 -1.5 4,229,734 + Echvi_3570 0.17 -0.6 4,229,734 + Echvi_3570 0.17 +0.3 4,229,773 - Echvi_3570 0.23 -1.0 4,229,906 - Echvi_3570 0.43 +0.2 4,229,949 - Echvi_3570 0.49 +0.5 4,229,949 - Echvi_3570 0.49 +1.4 4,229,949 - Echvi_3570 0.49 -0.2 4,229,970 - Echvi_3570 0.52 +0.1 4,229,976 + Echvi_3570 0.53 +0.5 4,229,976 + Echvi_3570 0.53 -0.4 4,229,989 + Echvi_3570 0.55 -2.2 4,230,021 + Echvi_3570 0.60 -0.5 4,230,226 - +0.7 4,230,226 - -0.1 4,230,233 - -0.0 4,230,233 - -1.2 4,230,340 - -0.6 4,230,379 - +0.4 4,230,451 + -0.3 4,230,451 + -0.2 4,230,452 - +0.3 4,230,490 + +0.9 4,230,491 - +0.7 4,230,497 - -1.7 4,230,497 - -0.4 4,230,516 + -0.5 4,230,517 - -0.2 4,230,517 - -0.5
Or see this region's nucleotide sequence