Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1306 and Echvi_1307 are separated by 215 nucleotides Echvi_1307 and Echvi_1308 are separated by 124 nucleotides Echvi_1308 and Echvi_1309 are separated by 493 nucleotides
Echvi_1306: Echvi_1306 - Xaa-Pro aminopeptidase, at 1,501,500 to 1,503,104
_1306
Echvi_1307: Echvi_1307 - Uncharacterized proteins of the AP superfamily, at 1,503,320 to 1,504,942
_1307
Echvi_1308: Echvi_1308 - hypothetical protein, at 1,505,067 to 1,505,222
_1308
Echvi_1309: Echvi_1309 - Uncharacterized protein related to plant photosystem II stability/assembly factor, at 1,505,716 to 1,508,517
_1309
Position (kb)
1503
1504
1505 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1502.378 kb on + strand, within Echvi_1306 at 1502.379 kb on - strand, within Echvi_1306 at 1502.429 kb on - strand, within Echvi_1306 at 1502.431 kb on + strand, within Echvi_1306 at 1502.432 kb on - strand, within Echvi_1306 at 1502.495 kb on + strand, within Echvi_1306 at 1502.503 kb on + strand, within Echvi_1306 at 1502.503 kb on + strand, within Echvi_1306 at 1502.504 kb on - strand, within Echvi_1306 at 1502.505 kb on + strand, within Echvi_1306 at 1502.505 kb on + strand, within Echvi_1306 at 1502.505 kb on + strand, within Echvi_1306 at 1502.505 kb on + strand, within Echvi_1306 at 1502.505 kb on + strand, within Echvi_1306 at 1502.505 kb on + strand, within Echvi_1306 at 1502.506 kb on - strand, within Echvi_1306 at 1502.506 kb on - strand, within Echvi_1306 at 1502.506 kb on - strand, within Echvi_1306 at 1502.506 kb on - strand, within Echvi_1306 at 1502.506 kb on - strand, within Echvi_1306 at 1502.506 kb on - strand, within Echvi_1306 at 1502.510 kb on + strand, within Echvi_1306 at 1502.510 kb on + strand, within Echvi_1306 at 1502.686 kb on - strand, within Echvi_1306 at 1502.753 kb on + strand, within Echvi_1306 at 1502.782 kb on + strand, within Echvi_1306 at 1502.782 kb on + strand, within Echvi_1306 at 1502.782 kb on + strand, within Echvi_1306 at 1502.783 kb on - strand, within Echvi_1306 at 1502.811 kb on + strand, within Echvi_1306 at 1502.872 kb on + strand, within Echvi_1306 at 1502.873 kb on - strand, within Echvi_1306 at 1502.897 kb on - strand, within Echvi_1306 at 1502.897 kb on - strand, within Echvi_1306 at 1502.970 kb on + strand at 1502.970 kb on + strand at 1503.090 kb on + strand at 1503.108 kb on - strand at 1503.141 kb on + strand at 1503.200 kb on - strand at 1503.207 kb on - strand at 1503.266 kb on - strand at 1503.281 kb on - strand at 1503.293 kb on + strand at 1503.293 kb on + strand at 1503.294 kb on - strand at 1503.294 kb on - strand at 1503.315 kb on + strand at 1503.316 kb on - strand at 1503.355 kb on - strand at 1503.438 kb on - strand at 1503.464 kb on - strand at 1503.478 kb on + strand at 1503.521 kb on + strand, within Echvi_1307 at 1503.522 kb on - strand, within Echvi_1307 at 1503.523 kb on + strand, within Echvi_1307 at 1503.524 kb on - strand, within Echvi_1307 at 1503.527 kb on + strand at 1503.528 kb on - strand, within Echvi_1307 at 1503.528 kb on - strand, within Echvi_1307 at 1503.539 kb on + strand, within Echvi_1307 at 1503.540 kb on - strand, within Echvi_1307 at 1503.564 kb on + strand, within Echvi_1307 at 1503.564 kb on + strand, within Echvi_1307 at 1503.567 kb on - strand, within Echvi_1307 at 1503.567 kb on - strand, within Echvi_1307 at 1503.568 kb on + strand, within Echvi_1307 at 1503.569 kb on - strand, within Echvi_1307 at 1503.569 kb on - strand, within Echvi_1307 at 1503.614 kb on + strand, within Echvi_1307 at 1503.615 kb on - strand, within Echvi_1307 at 1503.671 kb on - strand, within Echvi_1307 at 1503.672 kb on + strand, within Echvi_1307 at 1503.672 kb on + strand, within Echvi_1307 at 1503.673 kb on - strand, within Echvi_1307 at 1503.774 kb on + strand, within Echvi_1307 at 1503.774 kb on + strand, within Echvi_1307 at 1503.775 kb on - strand, within Echvi_1307 at 1503.863 kb on - strand, within Echvi_1307 at 1503.875 kb on + strand, within Echvi_1307 at 1503.876 kb on - strand, within Echvi_1307 at 1503.876 kb on - strand, within Echvi_1307 at 1503.879 kb on - strand, within Echvi_1307 at 1503.939 kb on - strand, within Echvi_1307 at 1503.965 kb on + strand, within Echvi_1307 at 1503.967 kb on + strand, within Echvi_1307 at 1503.980 kb on + strand, within Echvi_1307 at 1503.980 kb on + strand, within Echvi_1307 at 1503.983 kb on - strand, within Echvi_1307 at 1504.105 kb on + strand, within Echvi_1307 at 1504.112 kb on + strand, within Echvi_1307 at 1504.117 kb on + strand, within Echvi_1307 at 1504.142 kb on + strand, within Echvi_1307 at 1504.142 kb on + strand, within Echvi_1307 at 1504.143 kb on - strand, within Echvi_1307 at 1504.147 kb on + strand, within Echvi_1307 at 1504.148 kb on - strand, within Echvi_1307 at 1504.148 kb on - strand, within Echvi_1307 at 1504.220 kb on + strand, within Echvi_1307 at 1504.221 kb on - strand, within Echvi_1307 at 1504.224 kb on + strand, within Echvi_1307 at 1504.224 kb on + strand, within Echvi_1307 at 1504.225 kb on - strand, within Echvi_1307 at 1504.225 kb on - strand, within Echvi_1307 at 1504.264 kb on + strand, within Echvi_1307 at 1504.268 kb on + strand, within Echvi_1307 at 1504.268 kb on + strand, within Echvi_1307 at 1504.268 kb on + strand, within Echvi_1307 at 1504.268 kb on + strand, within Echvi_1307 at 1504.269 kb on - strand, within Echvi_1307 at 1504.269 kb on - strand, within Echvi_1307 at 1504.269 kb on - strand, within Echvi_1307 at 1504.269 kb on - strand, within Echvi_1307 at 1504.269 kb on - strand, within Echvi_1307 at 1504.307 kb on + strand, within Echvi_1307 at 1504.322 kb on + strand, within Echvi_1307 at 1504.337 kb on + strand, within Echvi_1307 at 1504.381 kb on + strand, within Echvi_1307 at 1504.381 kb on + strand, within Echvi_1307 at 1504.381 kb on + strand, within Echvi_1307 at 1504.381 kb on + strand, within Echvi_1307 at 1504.382 kb on - strand, within Echvi_1307 at 1504.385 kb on + strand, within Echvi_1307 at 1504.385 kb on + strand, within Echvi_1307 at 1504.387 kb on + strand, within Echvi_1307 at 1504.400 kb on - strand, within Echvi_1307 at 1504.408 kb on + strand, within Echvi_1307 at 1504.408 kb on + strand, within Echvi_1307 at 1504.409 kb on - strand, within Echvi_1307 at 1504.469 kb on + strand, within Echvi_1307 at 1504.531 kb on + strand, within Echvi_1307 at 1504.531 kb on + strand, within Echvi_1307 at 1504.532 kb on - strand, within Echvi_1307 at 1504.532 kb on - strand, within Echvi_1307 at 1504.616 kb on + strand, within Echvi_1307 at 1504.617 kb on - strand, within Echvi_1307 at 1504.617 kb on - strand, within Echvi_1307 at 1504.617 kb on - strand, within Echvi_1307 at 1504.647 kb on - strand, within Echvi_1307 at 1504.648 kb on + strand, within Echvi_1307 at 1504.753 kb on + strand, within Echvi_1307 at 1504.773 kb on - strand, within Echvi_1307 at 1504.774 kb on + strand, within Echvi_1307 at 1504.774 kb on + strand, within Echvi_1307 at 1504.774 kb on + strand, within Echvi_1307 at 1504.779 kb on - strand, within Echvi_1307 at 1504.784 kb on - strand at 1504.805 kb on + strand at 1504.805 kb on + strand at 1504.882 kb on - strand at 1504.890 kb on + strand at 1504.890 kb on + strand at 1504.890 kb on + strand at 1504.890 kb on + strand at 1504.890 kb on + strand at 1504.890 kb on + strand at 1504.891 kb on - strand at 1504.891 kb on - strand at 1504.891 kb on - strand at 1504.891 kb on - strand at 1504.891 kb on - strand at 1504.891 kb on - strand at 1504.896 kb on + strand at 1505.005 kb on + strand at 1505.044 kb on + strand at 1505.060 kb on + strand at 1505.111 kb on - strand, within Echvi_1308 at 1505.121 kb on - strand, within Echvi_1308 at 1505.123 kb on - strand, within Echvi_1308 at 1505.194 kb on + strand, within Echvi_1308 at 1505.194 kb on + strand, within Echvi_1308 at 1505.194 kb on + strand, within Echvi_1308 at 1505.196 kb on + strand, within Echvi_1308 at 1505.196 kb on + strand, within Echvi_1308 at 1505.247 kb on + strand at 1505.247 kb on + strand at 1505.283 kb on - strand at 1505.283 kb on - strand at 1505.295 kb on - strand at 1505.363 kb on + strand at 1505.363 kb on + strand at 1505.497 kb on + strand at 1505.533 kb on - strand at 1505.600 kb on - strand at 1505.605 kb on - strand at 1505.691 kb on + strand at 1505.692 kb on - strand at 1505.692 kb on - strand at 1505.692 kb on - strand at 1505.733 kb on + strand at 1505.770 kb on + strand at 1505.776 kb on + strand at 1505.776 kb on + strand at 1505.776 kb on + strand at 1505.788 kb on + strand at 1505.814 kb on + strand at 1505.815 kb on - strand at 1505.815 kb on - strand at 1505.815 kb on - strand at 1505.815 kb on - strand at 1505.840 kb on - strand at 1505.843 kb on + strand at 1505.843 kb on + strand at 1505.844 kb on - strand at 1505.844 kb on - strand at 1505.896 kb on + strand at 1505.896 kb on + strand at 1505.896 kb on + strand at 1505.897 kb on - strand at 1505.897 kb on - strand at 1505.910 kb on + strand at 1505.942 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 1,502,378 + Echvi_1306 0.55 +0.3 1,502,379 - Echvi_1306 0.55 -0.3 1,502,429 - Echvi_1306 0.58 -1.6 1,502,431 + Echvi_1306 0.58 -0.8 1,502,432 - Echvi_1306 0.58 +1.8 1,502,495 + Echvi_1306 0.62 +0.0 1,502,503 + Echvi_1306 0.62 +0.0 1,502,503 + Echvi_1306 0.62 +1.6 1,502,504 - Echvi_1306 0.63 +0.5 1,502,505 + Echvi_1306 0.63 +2.0 1,502,505 + Echvi_1306 0.63 -1.7 1,502,505 + Echvi_1306 0.63 -1.1 1,502,505 + Echvi_1306 0.63 -0.1 1,502,505 + Echvi_1306 0.63 +0.7 1,502,505 + Echvi_1306 0.63 -0.1 1,502,506 - Echvi_1306 0.63 -1.3 1,502,506 - Echvi_1306 0.63 +1.5 1,502,506 - Echvi_1306 0.63 -0.9 1,502,506 - Echvi_1306 0.63 -0.3 1,502,506 - Echvi_1306 0.63 +0.2 1,502,506 - Echvi_1306 0.63 -0.1 1,502,510 + Echvi_1306 0.63 -0.2 1,502,510 + Echvi_1306 0.63 +0.2 1,502,686 - Echvi_1306 0.74 +2.1 1,502,753 + Echvi_1306 0.78 +2.6 1,502,782 + Echvi_1306 0.80 +0.1 1,502,782 + Echvi_1306 0.80 -0.9 1,502,782 + Echvi_1306 0.80 -0.9 1,502,783 - Echvi_1306 0.80 +0.3 1,502,811 + Echvi_1306 0.82 -0.2 1,502,872 + Echvi_1306 0.85 +0.1 1,502,873 - Echvi_1306 0.86 -0.4 1,502,897 - Echvi_1306 0.87 +0.8 1,502,897 - Echvi_1306 0.87 +2.3 1,502,970 + +0.4 1,502,970 + +2.4 1,503,090 + +2.3 1,503,108 - -0.4 1,503,141 + +0.3 1,503,200 - -0.3 1,503,207 - -0.8 1,503,266 - +0.2 1,503,281 - +0.4 1,503,293 + -1.0 1,503,293 + -0.1 1,503,294 - -0.5 1,503,294 - -0.4 1,503,315 + +0.8 1,503,316 - +0.8 1,503,355 - -0.6 1,503,438 - +0.4 1,503,464 - -0.7 1,503,478 + +1.8 1,503,521 + Echvi_1307 0.12 -1.5 1,503,522 - Echvi_1307 0.12 +0.5 1,503,523 + Echvi_1307 0.13 +0.2 1,503,524 - Echvi_1307 0.13 -0.6 1,503,527 + +1.9 1,503,528 - Echvi_1307 0.13 -1.5 1,503,528 - Echvi_1307 0.13 -1.0 1,503,539 + Echvi_1307 0.13 -0.6 1,503,540 - Echvi_1307 0.14 +0.4 1,503,564 + Echvi_1307 0.15 -0.1 1,503,564 + Echvi_1307 0.15 +1.3 1,503,567 - Echvi_1307 0.15 -1.1 1,503,567 - Echvi_1307 0.15 +0.0 1,503,568 + Echvi_1307 0.15 -0.8 1,503,569 - Echvi_1307 0.15 -0.7 1,503,569 - Echvi_1307 0.15 -1.3 1,503,614 + Echvi_1307 0.18 -2.0 1,503,615 - Echvi_1307 0.18 -0.5 1,503,671 - Echvi_1307 0.22 -0.5 1,503,672 + Echvi_1307 0.22 +0.1 1,503,672 + Echvi_1307 0.22 -0.3 1,503,673 - Echvi_1307 0.22 -1.1 1,503,774 + Echvi_1307 0.28 -0.2 1,503,774 + Echvi_1307 0.28 -0.1 1,503,775 - Echvi_1307 0.28 +0.2 1,503,863 - Echvi_1307 0.33 -0.4 1,503,875 + Echvi_1307 0.34 -0.8 1,503,876 - Echvi_1307 0.34 -1.6 1,503,876 - Echvi_1307 0.34 -0.5 1,503,879 - Echvi_1307 0.34 -0.9 1,503,939 - Echvi_1307 0.38 -2.5 1,503,965 + Echvi_1307 0.40 -1.0 1,503,967 + Echvi_1307 0.40 -2.8 1,503,980 + Echvi_1307 0.41 -0.3 1,503,980 + Echvi_1307 0.41 -0.3 1,503,983 - Echvi_1307 0.41 -0.6 1,504,105 + Echvi_1307 0.48 +0.0 1,504,112 + Echvi_1307 0.49 -1.7 1,504,117 + Echvi_1307 0.49 +1.8 1,504,142 + Echvi_1307 0.51 -1.4 1,504,142 + Echvi_1307 0.51 -0.7 1,504,143 - Echvi_1307 0.51 -0.7 1,504,147 + Echvi_1307 0.51 +1.0 1,504,148 - Echvi_1307 0.51 -2.1 1,504,148 - Echvi_1307 0.51 +1.3 1,504,220 + Echvi_1307 0.55 +0.5 1,504,221 - Echvi_1307 0.56 -0.4 1,504,224 + Echvi_1307 0.56 -1.0 1,504,224 + Echvi_1307 0.56 -0.3 1,504,225 - Echvi_1307 0.56 -0.8 1,504,225 - Echvi_1307 0.56 +0.8 1,504,264 + Echvi_1307 0.58 -1.5 1,504,268 + Echvi_1307 0.58 -0.7 1,504,268 + Echvi_1307 0.58 -0.8 1,504,268 + Echvi_1307 0.58 -0.1 1,504,268 + Echvi_1307 0.58 -0.2 1,504,269 - Echvi_1307 0.58 -0.5 1,504,269 - Echvi_1307 0.58 -0.7 1,504,269 - Echvi_1307 0.58 +0.4 1,504,269 - Echvi_1307 0.58 -2.1 1,504,269 - Echvi_1307 0.58 -0.7 1,504,307 + Echvi_1307 0.61 +0.9 1,504,322 + Echvi_1307 0.62 -0.2 1,504,337 + Echvi_1307 0.63 +0.9 1,504,381 + Echvi_1307 0.65 +0.6 1,504,381 + Echvi_1307 0.65 -1.0 1,504,381 + Echvi_1307 0.65 -0.6 1,504,381 + Echvi_1307 0.65 -1.5 1,504,382 - Echvi_1307 0.65 -0.3 1,504,385 + Echvi_1307 0.66 -0.2 1,504,385 + Echvi_1307 0.66 -0.3 1,504,387 + Echvi_1307 0.66 -0.2 1,504,400 - Echvi_1307 0.67 -0.6 1,504,408 + Echvi_1307 0.67 +0.2 1,504,408 + Echvi_1307 0.67 -2.4 1,504,409 - Echvi_1307 0.67 -0.3 1,504,469 + Echvi_1307 0.71 +0.4 1,504,531 + Echvi_1307 0.75 -0.3 1,504,531 + Echvi_1307 0.75 -0.8 1,504,532 - Echvi_1307 0.75 -0.4 1,504,532 - Echvi_1307 0.75 -1.5 1,504,616 + Echvi_1307 0.80 +0.7 1,504,617 - Echvi_1307 0.80 -0.6 1,504,617 - Echvi_1307 0.80 -0.5 1,504,617 - Echvi_1307 0.80 -0.5 1,504,647 - Echvi_1307 0.82 -0.8 1,504,648 + Echvi_1307 0.82 -0.4 1,504,753 + Echvi_1307 0.88 -0.5 1,504,773 - Echvi_1307 0.90 +0.9 1,504,774 + Echvi_1307 0.90 +0.2 1,504,774 + Echvi_1307 0.90 +0.1 1,504,774 + Echvi_1307 0.90 -1.0 1,504,779 - Echvi_1307 0.90 -0.1 1,504,784 - -2.1 1,504,805 + -1.0 1,504,805 + -1.7 1,504,882 - -0.8 1,504,890 + -0.1 1,504,890 + -0.8 1,504,890 + -0.3 1,504,890 + -2.5 1,504,890 + +2.5 1,504,890 + +0.0 1,504,891 - -0.4 1,504,891 - -0.2 1,504,891 - -1.4 1,504,891 - -2.8 1,504,891 - +0.3 1,504,891 - -0.1 1,504,896 + -0.3 1,505,005 + +1.8 1,505,044 + +0.1 1,505,060 + -0.1 1,505,111 - Echvi_1308 0.28 +0.3 1,505,121 - Echvi_1308 0.35 +0.4 1,505,123 - Echvi_1308 0.36 -1.1 1,505,194 + Echvi_1308 0.81 -0.7 1,505,194 + Echvi_1308 0.81 +0.5 1,505,194 + Echvi_1308 0.81 -0.1 1,505,196 + Echvi_1308 0.83 +1.3 1,505,196 + Echvi_1308 0.83 -0.4 1,505,247 + -0.4 1,505,247 + -2.0 1,505,283 - +0.3 1,505,283 - +1.4 1,505,295 - +1.0 1,505,363 + -0.3 1,505,363 + -2.1 1,505,497 + +0.1 1,505,533 - -0.1 1,505,600 - -0.0 1,505,605 - -1.2 1,505,691 + -0.1 1,505,692 - -0.0 1,505,692 - -0.7 1,505,692 - +0.2 1,505,733 + +1.2 1,505,770 + +0.2 1,505,776 + +0.0 1,505,776 + -0.6 1,505,776 + -0.7 1,505,788 + -1.5 1,505,814 + +0.4 1,505,815 - -0.3 1,505,815 - -0.1 1,505,815 - +0.6 1,505,815 - -0.4 1,505,840 - +2.2 1,505,843 + -0.6 1,505,843 + +0.7 1,505,844 - +1.4 1,505,844 - +2.6 1,505,896 + -0.3 1,505,896 + -0.3 1,505,896 + -0.2 1,505,897 - +0.8 1,505,897 - +3.2 1,505,910 + -1.1 1,505,942 - -0.2
Or see this region's nucleotide sequence