Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4483

Experiment: M9 with sucrose; no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_4482 and EX28DRAFT_4483 are separated by 357 nucleotidesEX28DRAFT_4483 and EX28DRAFT_4484 are separated by 83 nucleotides EX28DRAFT_4482: EX28DRAFT_4482 - ATP-dependent DNA helicase UvrD (EC 3.6.1.-), at 46,679 to 48,841 _4482 EX28DRAFT_4483: EX28DRAFT_4483 - magnesium Mg(2+) and cobalt Co(2+) transport protein (corA), at 49,199 to 50,149 _4483 EX28DRAFT_4484: EX28DRAFT_4484 - rarD protein, at 50,233 to 51,129 _4484 Position (kb) 49 50 51Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 48.204 kb on + strand, within EX28DRAFT_4482at 48.518 kb on + strand, within EX28DRAFT_4482at 48.601 kb on - strand, within EX28DRAFT_4482at 48.733 kb on + strandat 48.868 kb on - strandat 48.902 kb on + strandat 48.902 kb on + strandat 48.902 kb on + strandat 48.943 kb on - strandat 48.943 kb on - strandat 48.943 kb on - strandat 48.944 kb on + strandat 49.009 kb on + strandat 49.051 kb on + strandat 49.052 kb on - strandat 49.073 kb on + strandat 49.125 kb on - strandat 49.586 kb on + strand, within EX28DRAFT_4483at 49.586 kb on + strand, within EX28DRAFT_4483at 49.652 kb on + strand, within EX28DRAFT_4483at 49.652 kb on + strand, within EX28DRAFT_4483at 49.709 kb on + strand, within EX28DRAFT_4483at 49.710 kb on - strand, within EX28DRAFT_4483at 50.092 kb on + strandat 50.092 kb on + strandat 50.264 kb on + strandat 50.264 kb on + strandat 50.391 kb on - strand, within EX28DRAFT_4484at 50.552 kb on + strand, within EX28DRAFT_4484at 50.552 kb on + strand, within EX28DRAFT_4484at 50.626 kb on - strand, within EX28DRAFT_4484at 50.844 kb on + strand, within EX28DRAFT_4484at 50.845 kb on - strand, within EX28DRAFT_4484at 50.860 kb on - strand, within EX28DRAFT_4484at 50.983 kb on - strand, within EX28DRAFT_4484at 51.053 kb on + strandat 51.054 kb on - strandat 51.075 kb on + strandat 51.075 kb on + strandat 51.097 kb on + strandat 51.098 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control
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48,204 + EX28DRAFT_4482 0.71 +1.2
48,518 + EX28DRAFT_4482 0.85 -4.0
48,601 - EX28DRAFT_4482 0.89 +0.1
48,733 + +0.0
48,868 - -0.1
48,902 + +1.3
48,902 + -1.4
48,902 + +0.4
48,943 - +0.4
48,943 - +2.6
48,943 - +0.3
48,944 + -0.8
49,009 + -1.6
49,051 + +0.5
49,052 - -0.1
49,073 + -1.1
49,125 - -0.9
49,586 + EX28DRAFT_4483 0.41 +0.5
49,586 + EX28DRAFT_4483 0.41 +0.5
49,652 + EX28DRAFT_4483 0.48 +1.6
49,652 + EX28DRAFT_4483 0.48 +0.6
49,709 + EX28DRAFT_4483 0.54 +0.1
49,710 - EX28DRAFT_4483 0.54 +0.8
50,092 + -0.2
50,092 + -0.3
50,264 + +0.5
50,264 + +0.8
50,391 - EX28DRAFT_4484 0.18 -0.2
50,552 + EX28DRAFT_4484 0.36 -0.1
50,552 + EX28DRAFT_4484 0.36 +0.4
50,626 - EX28DRAFT_4484 0.44 -0.0
50,844 + EX28DRAFT_4484 0.68 +0.0
50,845 - EX28DRAFT_4484 0.68 -0.6
50,860 - EX28DRAFT_4484 0.70 +1.2
50,983 - EX28DRAFT_4484 0.84 +1.1
51,053 + -0.4
51,054 - +0.3
51,075 + -0.3
51,075 + +1.5
51,097 + +0.6
51,098 - +0.5

Or see this region's nucleotide sequence