Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3940 and EX28DRAFT_3941 are separated by 2 nucleotides EX28DRAFT_3941 and EX28DRAFT_3942 are separated by 136 nucleotides
EX28DRAFT_3940: EX28DRAFT_3940 - Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase, at 149,925 to 151,301
_3940
EX28DRAFT_3941: EX28DRAFT_3941 - Phosphotransferase system cellobiose-specific component IIA, at 151,304 to 151,609
_3941
EX28DRAFT_3942: EX28DRAFT_3942 - Maltoporin (phage lambda and maltose receptor), at 151,746 to 153,125
_3942
Position (kb) 151
152 Strain fitness (log2 ratio) -2
-1
0
1 at 150.398 kb on + strand, within EX28DRAFT_3940 at 150.398 kb on + strand, within EX28DRAFT_3940 at 150.496 kb on - strand, within EX28DRAFT_3940 at 150.731 kb on - strand, within EX28DRAFT_3940 at 150.798 kb on + strand, within EX28DRAFT_3940 at 150.799 kb on - strand, within EX28DRAFT_3940 at 150.801 kb on + strand, within EX28DRAFT_3940 at 150.879 kb on - strand, within EX28DRAFT_3940 at 150.882 kb on + strand, within EX28DRAFT_3940 at 150.883 kb on - strand, within EX28DRAFT_3940 at 150.942 kb on - strand, within EX28DRAFT_3940 at 150.945 kb on + strand, within EX28DRAFT_3940 at 150.945 kb on + strand, within EX28DRAFT_3940 at 150.946 kb on - strand, within EX28DRAFT_3940 at 151.521 kb on + strand, within EX28DRAFT_3941 at 151.522 kb on - strand, within EX28DRAFT_3941 at 151.652 kb on - strand at 151.731 kb on + strand at 151.731 kb on + strand at 151.731 kb on + strand at 151.741 kb on + strand at 151.986 kb on - strand, within EX28DRAFT_3942 at 152.040 kb on + strand, within EX28DRAFT_3942 at 152.040 kb on + strand, within EX28DRAFT_3942 at 152.040 kb on + strand, within EX28DRAFT_3942 at 152.040 kb on + strand, within EX28DRAFT_3942 at 152.062 kb on - strand, within EX28DRAFT_3942 at 152.062 kb on - strand, within EX28DRAFT_3942 at 152.198 kb on + strand, within EX28DRAFT_3942 at 152.494 kb on - strand, within EX28DRAFT_3942 at 152.551 kb on - strand, within EX28DRAFT_3942 at 152.559 kb on + strand, within EX28DRAFT_3942
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 150,398 + EX28DRAFT_3940 0.34 +0.1 150,398 + EX28DRAFT_3940 0.34 +0.5 150,496 - EX28DRAFT_3940 0.41 +0.5 150,731 - EX28DRAFT_3940 0.59 +0.4 150,798 + EX28DRAFT_3940 0.63 +0.7 150,799 - EX28DRAFT_3940 0.63 +0.1 150,801 + EX28DRAFT_3940 0.64 +1.1 150,879 - EX28DRAFT_3940 0.69 +0.7 150,882 + EX28DRAFT_3940 0.69 +0.2 150,883 - EX28DRAFT_3940 0.70 -0.2 150,942 - EX28DRAFT_3940 0.74 +0.5 150,945 + EX28DRAFT_3940 0.74 -2.3 150,945 + EX28DRAFT_3940 0.74 -0.3 150,946 - EX28DRAFT_3940 0.74 -0.2 151,521 + EX28DRAFT_3941 0.71 -1.3 151,522 - EX28DRAFT_3941 0.71 -0.2 151,652 - -0.1 151,731 + -0.0 151,731 + +0.2 151,731 + +0.3 151,741 + +0.0 151,986 - EX28DRAFT_3942 0.17 +0.4 152,040 + EX28DRAFT_3942 0.21 -0.5 152,040 + EX28DRAFT_3942 0.21 +0.3 152,040 + EX28DRAFT_3942 0.21 +0.3 152,040 + EX28DRAFT_3942 0.21 -0.1 152,062 - EX28DRAFT_3942 0.23 -0.5 152,062 - EX28DRAFT_3942 0.23 -0.1 152,198 + EX28DRAFT_3942 0.33 +1.7 152,494 - EX28DRAFT_3942 0.54 -0.4 152,551 - EX28DRAFT_3942 0.58 -0.5 152,559 + EX28DRAFT_3942 0.59 +0.0
Or see this region's nucleotide sequence