Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3739 and EX28DRAFT_3740 are separated by 49 nucleotides EX28DRAFT_3740 and EX28DRAFT_3741 overlap by 1 nucleotides EX28DRAFT_3741 and EX28DRAFT_3742 overlap by 4 nucleotides
EX28DRAFT_3739: EX28DRAFT_3739 - TonB-dependent siderophore receptor, at 416,271 to 418,520
_3739
EX28DRAFT_3740: EX28DRAFT_3740 - ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components, at 418,570 to 419,367
_3740
EX28DRAFT_3741: EX28DRAFT_3741 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 419,367 to 420,257
_3741
EX28DRAFT_3742: EX28DRAFT_3742 - ABC-type Fe3+-siderophore transport system, permease component, at 420,254 to 422,236
_3742
Position (kb) 418
419
420 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 417.679 kb on - strand, within EX28DRAFT_3739 at 417.825 kb on + strand, within EX28DRAFT_3739 at 417.845 kb on - strand, within EX28DRAFT_3739 at 417.923 kb on + strand, within EX28DRAFT_3739 at 417.936 kb on + strand, within EX28DRAFT_3739 at 417.937 kb on - strand, within EX28DRAFT_3739 at 417.954 kb on + strand, within EX28DRAFT_3739 at 417.954 kb on + strand, within EX28DRAFT_3739 at 417.955 kb on - strand, within EX28DRAFT_3739 at 417.996 kb on + strand, within EX28DRAFT_3739 at 418.013 kb on + strand, within EX28DRAFT_3739 at 418.137 kb on + strand, within EX28DRAFT_3739 at 418.137 kb on + strand, within EX28DRAFT_3739 at 418.138 kb on - strand, within EX28DRAFT_3739 at 418.138 kb on - strand, within EX28DRAFT_3739 at 418.139 kb on + strand, within EX28DRAFT_3739 at 418.139 kb on + strand, within EX28DRAFT_3739 at 418.140 kb on - strand, within EX28DRAFT_3739 at 418.140 kb on - strand, within EX28DRAFT_3739 at 418.143 kb on + strand, within EX28DRAFT_3739 at 418.144 kb on - strand, within EX28DRAFT_3739 at 418.144 kb on - strand, within EX28DRAFT_3739 at 418.144 kb on - strand, within EX28DRAFT_3739 at 418.158 kb on + strand, within EX28DRAFT_3739 at 418.176 kb on + strand, within EX28DRAFT_3739 at 418.233 kb on + strand, within EX28DRAFT_3739 at 418.234 kb on - strand, within EX28DRAFT_3739 at 418.303 kb on - strand at 418.338 kb on + strand at 418.365 kb on + strand at 418.438 kb on - strand at 418.461 kb on + strand at 418.518 kb on + strand at 418.518 kb on + strand at 418.518 kb on + strand at 418.519 kb on - strand at 418.557 kb on + strand at 418.558 kb on - strand at 418.835 kb on - strand, within EX28DRAFT_3740 at 419.218 kb on + strand, within EX28DRAFT_3740 at 419.298 kb on + strand at 419.298 kb on + strand at 419.299 kb on - strand at 419.299 kb on - strand at 419.299 kb on - strand at 419.560 kb on - strand, within EX28DRAFT_3741 at 419.560 kb on - strand, within EX28DRAFT_3741 at 419.560 kb on - strand, within EX28DRAFT_3741 at 419.561 kb on + strand, within EX28DRAFT_3741 at 419.562 kb on - strand, within EX28DRAFT_3741 at 419.562 kb on - strand, within EX28DRAFT_3741 at 420.190 kb on - strand at 420.248 kb on + strand at 420.248 kb on + strand at 420.249 kb on - strand at 420.249 kb on - strand at 420.259 kb on + strand at 420.291 kb on + strand at 420.318 kb on + strand at 420.319 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 417,679 - EX28DRAFT_3739 0.63 +0.4 417,825 + EX28DRAFT_3739 0.69 +1.1 417,845 - EX28DRAFT_3739 0.70 -0.8 417,923 + EX28DRAFT_3739 0.73 -0.1 417,936 + EX28DRAFT_3739 0.74 -0.6 417,937 - EX28DRAFT_3739 0.74 +0.0 417,954 + EX28DRAFT_3739 0.75 -0.8 417,954 + EX28DRAFT_3739 0.75 -2.2 417,955 - EX28DRAFT_3739 0.75 +0.0 417,996 + EX28DRAFT_3739 0.77 +0.0 418,013 + EX28DRAFT_3739 0.77 +0.2 418,137 + EX28DRAFT_3739 0.83 +0.2 418,137 + EX28DRAFT_3739 0.83 -1.3 418,138 - EX28DRAFT_3739 0.83 -3.3 418,138 - EX28DRAFT_3739 0.83 +0.4 418,139 + EX28DRAFT_3739 0.83 -2.1 418,139 + EX28DRAFT_3739 0.83 +0.5 418,140 - EX28DRAFT_3739 0.83 +0.3 418,140 - EX28DRAFT_3739 0.83 +0.0 418,143 + EX28DRAFT_3739 0.83 +0.4 418,144 - EX28DRAFT_3739 0.83 +0.5 418,144 - EX28DRAFT_3739 0.83 +0.5 418,144 - EX28DRAFT_3739 0.83 +1.2 418,158 + EX28DRAFT_3739 0.84 -0.3 418,176 + EX28DRAFT_3739 0.85 -0.5 418,233 + EX28DRAFT_3739 0.87 +0.0 418,234 - EX28DRAFT_3739 0.87 +0.9 418,303 - -1.7 418,338 + +1.0 418,365 + -0.1 418,438 - -0.1 418,461 + +0.3 418,518 + +0.2 418,518 + -2.0 418,518 + +2.5 418,519 - +0.6 418,557 + +0.4 418,558 - +0.7 418,835 - EX28DRAFT_3740 0.33 -0.6 419,218 + EX28DRAFT_3740 0.81 -0.9 419,298 + -0.9 419,298 + +0.5 419,299 - +1.2 419,299 - -0.1 419,299 - +0.1 419,560 - EX28DRAFT_3741 0.22 -0.4 419,560 - EX28DRAFT_3741 0.22 +0.3 419,560 - EX28DRAFT_3741 0.22 -1.1 419,561 + EX28DRAFT_3741 0.22 -0.5 419,562 - EX28DRAFT_3741 0.22 -0.3 419,562 - EX28DRAFT_3741 0.22 +1.7 420,190 - -0.4 420,248 + -1.1 420,248 + +0.1 420,249 - +0.5 420,249 - -0.3 420,259 + -0.1 420,291 + -0.4 420,318 + +1.3 420,319 - -0.2
Or see this region's nucleotide sequence