Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3245 and EX28DRAFT_3246 overlap by 1 nucleotides EX28DRAFT_3246 and EX28DRAFT_3247 are separated by 18 nucleotides EX28DRAFT_3247 and EX28DRAFT_3248 are separated by 4 nucleotides EX28DRAFT_3248 and EX28DRAFT_3249 are separated by 7 nucleotides
EX28DRAFT_3245: EX28DRAFT_3245 - Predicted NTP binding protein (contains STAS domain), at 540,376 to 540,669
_3245
EX28DRAFT_3246: EX28DRAFT_3246 - ABC-type transport system involved in resistance to organic solvents, auxiliary component, at 540,669 to 541,304
_3246
EX28DRAFT_3247: EX28DRAFT_3247 - mce related protein, at 541,323 to 541,871
_3247
EX28DRAFT_3248: EX28DRAFT_3248 - ABC transport permease subunit, at 541,876 to 542,658
_3248
EX28DRAFT_3249: EX28DRAFT_3249 - ABC-type transport system involved in resistance to organic solvents, ATPase component, at 542,666 to 543,478
_3249
Position (kb) 541
542 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 540.360 kb on + strand at 540.408 kb on - strand, within EX28DRAFT_3245 at 540.538 kb on + strand, within EX28DRAFT_3245 at 540.671 kb on - strand at 540.671 kb on - strand at 540.671 kb on - strand at 540.917 kb on + strand, within EX28DRAFT_3246 at 540.955 kb on + strand, within EX28DRAFT_3246 at 540.955 kb on + strand, within EX28DRAFT_3246 at 540.956 kb on - strand, within EX28DRAFT_3246 at 540.971 kb on - strand, within EX28DRAFT_3246 at 541.027 kb on + strand, within EX28DRAFT_3246 at 541.061 kb on - strand, within EX28DRAFT_3246 at 541.061 kb on - strand, within EX28DRAFT_3246 at 541.061 kb on - strand, within EX28DRAFT_3246 at 541.063 kb on + strand, within EX28DRAFT_3246 at 541.064 kb on - strand, within EX28DRAFT_3246 at 541.090 kb on + strand, within EX28DRAFT_3246 at 541.151 kb on + strand, within EX28DRAFT_3246 at 541.164 kb on - strand, within EX28DRAFT_3246 at 541.322 kb on - strand at 541.322 kb on - strand at 541.595 kb on + strand, within EX28DRAFT_3247 at 541.639 kb on + strand, within EX28DRAFT_3247 at 541.659 kb on - strand, within EX28DRAFT_3247 at 541.659 kb on - strand, within EX28DRAFT_3247 at 541.668 kb on + strand, within EX28DRAFT_3247 at 541.668 kb on + strand, within EX28DRAFT_3247 at 541.744 kb on + strand, within EX28DRAFT_3247 at 541.744 kb on + strand, within EX28DRAFT_3247 at 541.745 kb on - strand, within EX28DRAFT_3247 at 541.745 kb on - strand, within EX28DRAFT_3247 at 541.745 kb on - strand, within EX28DRAFT_3247 at 541.837 kb on - strand at 541.837 kb on - strand at 541.939 kb on + strand at 541.940 kb on - strand at 541.940 kb on - strand at 541.947 kb on + strand at 541.948 kb on - strand at 541.948 kb on - strand at 541.948 kb on - strand at 542.417 kb on + strand, within EX28DRAFT_3248 at 542.417 kb on + strand, within EX28DRAFT_3248 at 542.417 kb on + strand, within EX28DRAFT_3248 at 542.418 kb on - strand, within EX28DRAFT_3248 at 542.418 kb on - strand, within EX28DRAFT_3248 at 542.436 kb on - strand, within EX28DRAFT_3248 at 542.458 kb on - strand, within EX28DRAFT_3248 at 542.512 kb on - strand, within EX28DRAFT_3248 at 542.512 kb on - strand, within EX28DRAFT_3248 at 542.512 kb on - strand, within EX28DRAFT_3248 at 542.513 kb on + strand, within EX28DRAFT_3248 at 542.513 kb on + strand, within EX28DRAFT_3248 at 542.514 kb on - strand, within EX28DRAFT_3248 at 542.650 kb on + strand at 542.650 kb on + strand at 542.667 kb on + strand at 542.675 kb on + strand at 542.697 kb on + strand at 542.830 kb on + strand, within EX28DRAFT_3249 at 542.832 kb on + strand, within EX28DRAFT_3249 at 542.855 kb on + strand, within EX28DRAFT_3249 at 542.864 kb on + strand, within EX28DRAFT_3249
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 540,360 + +0.9 540,408 - EX28DRAFT_3245 0.11 -0.0 540,538 + EX28DRAFT_3245 0.55 +0.5 540,671 - -0.2 540,671 - -0.3 540,671 - +0.1 540,917 + EX28DRAFT_3246 0.39 -0.2 540,955 + EX28DRAFT_3246 0.45 +0.8 540,955 + EX28DRAFT_3246 0.45 +0.2 540,956 - EX28DRAFT_3246 0.45 -0.1 540,971 - EX28DRAFT_3246 0.47 +0.8 541,027 + EX28DRAFT_3246 0.56 -1.5 541,061 - EX28DRAFT_3246 0.62 +0.5 541,061 - EX28DRAFT_3246 0.62 -0.9 541,061 - EX28DRAFT_3246 0.62 -0.1 541,063 + EX28DRAFT_3246 0.62 -2.5 541,064 - EX28DRAFT_3246 0.62 -0.5 541,090 + EX28DRAFT_3246 0.66 -0.7 541,151 + EX28DRAFT_3246 0.76 -0.4 541,164 - EX28DRAFT_3246 0.78 -0.1 541,322 - +0.1 541,322 - +0.6 541,595 + EX28DRAFT_3247 0.50 -0.1 541,639 + EX28DRAFT_3247 0.58 +0.4 541,659 - EX28DRAFT_3247 0.61 +0.9 541,659 - EX28DRAFT_3247 0.61 +0.5 541,668 + EX28DRAFT_3247 0.63 -0.1 541,668 + EX28DRAFT_3247 0.63 +1.0 541,744 + EX28DRAFT_3247 0.77 +0.5 541,744 + EX28DRAFT_3247 0.77 +0.4 541,745 - EX28DRAFT_3247 0.77 +0.9 541,745 - EX28DRAFT_3247 0.77 +0.2 541,745 - EX28DRAFT_3247 0.77 +0.7 541,837 - +0.5 541,837 - -0.1 541,939 + -0.6 541,940 - +1.2 541,940 - +0.1 541,947 + +0.1 541,948 - +0.7 541,948 - +0.7 541,948 - -0.8 542,417 + EX28DRAFT_3248 0.69 +0.2 542,417 + EX28DRAFT_3248 0.69 -2.7 542,417 + EX28DRAFT_3248 0.69 -0.8 542,418 - EX28DRAFT_3248 0.69 +0.6 542,418 - EX28DRAFT_3248 0.69 +0.0 542,436 - EX28DRAFT_3248 0.72 -0.6 542,458 - EX28DRAFT_3248 0.74 +0.8 542,512 - EX28DRAFT_3248 0.81 +0.1 542,512 - EX28DRAFT_3248 0.81 +0.6 542,512 - EX28DRAFT_3248 0.81 +0.2 542,513 + EX28DRAFT_3248 0.81 +0.2 542,513 + EX28DRAFT_3248 0.81 +0.1 542,514 - EX28DRAFT_3248 0.81 -3.1 542,650 + +0.4 542,650 + -1.4 542,667 + +0.3 542,675 + -3.5 542,697 + +0.4 542,830 + EX28DRAFT_3249 0.20 +0.2 542,832 + EX28DRAFT_3249 0.20 +0.9 542,855 + EX28DRAFT_3249 0.23 +1.5 542,864 + EX28DRAFT_3249 0.24 -1.7
Or see this region's nucleotide sequence