Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2607 and EX28DRAFT_2608 overlap by 14 nucleotides EX28DRAFT_2608 and EX28DRAFT_2609 are separated by 363 nucleotides
EX28DRAFT_2607: EX28DRAFT_2607 - Homocysteine/selenocysteine methylase (S-methylmethionine-dependent), at 2,643,433 to 2,644,365
_2607
EX28DRAFT_2608: EX28DRAFT_2608 - Amino acid transporters, at 2,644,352 to 2,645,752
_2608
EX28DRAFT_2609: EX28DRAFT_2609 - Predicted permease, at 2,646,116 to 2,647,225
_2609
Position (kb)
2644
2645
2646 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2643.389 kb on + strand at 2643.396 kb on - strand at 2643.494 kb on - strand at 2643.588 kb on - strand, within EX28DRAFT_2607 at 2643.951 kb on - strand, within EX28DRAFT_2607 at 2644.049 kb on + strand, within EX28DRAFT_2607 at 2644.049 kb on + strand, within EX28DRAFT_2607 at 2644.050 kb on - strand, within EX28DRAFT_2607 at 2644.194 kb on - strand, within EX28DRAFT_2607 at 2644.264 kb on + strand, within EX28DRAFT_2607 at 2644.387 kb on + strand at 2644.387 kb on + strand at 2644.401 kb on + strand at 2644.401 kb on + strand at 2644.402 kb on - strand at 2644.404 kb on + strand at 2644.504 kb on + strand, within EX28DRAFT_2608 at 2644.723 kb on + strand, within EX28DRAFT_2608 at 2644.724 kb on - strand, within EX28DRAFT_2608 at 2644.724 kb on - strand, within EX28DRAFT_2608 at 2644.831 kb on - strand, within EX28DRAFT_2608 at 2645.006 kb on - strand, within EX28DRAFT_2608 at 2645.006 kb on - strand, within EX28DRAFT_2608 at 2645.219 kb on - strand, within EX28DRAFT_2608 at 2645.252 kb on - strand, within EX28DRAFT_2608 at 2645.324 kb on - strand, within EX28DRAFT_2608 at 2645.599 kb on - strand, within EX28DRAFT_2608 at 2645.641 kb on - strand at 2645.692 kb on + strand at 2645.692 kb on + strand at 2645.752 kb on + strand at 2645.755 kb on + strand at 2645.755 kb on + strand at 2645.756 kb on - strand at 2645.756 kb on - strand at 2645.756 kb on - strand at 2645.762 kb on + strand at 2645.762 kb on + strand at 2645.764 kb on + strand at 2645.764 kb on + strand at 2645.765 kb on - strand at 2645.768 kb on + strand at 2645.769 kb on - strand at 2645.778 kb on + strand at 2645.778 kb on + strand at 2645.778 kb on + strand at 2645.779 kb on - strand at 2645.779 kb on - strand at 2645.800 kb on + strand at 2645.800 kb on + strand at 2645.801 kb on - strand at 2645.825 kb on + strand at 2645.889 kb on - strand at 2645.889 kb on - strand at 2645.889 kb on - strand at 2645.930 kb on + strand at 2645.930 kb on + strand at 2645.931 kb on - strand at 2645.934 kb on + strand at 2645.935 kb on - strand at 2645.935 kb on - strand at 2645.935 kb on - strand at 2646.059 kb on + strand at 2646.060 kb on - strand at 2646.078 kb on + strand at 2646.079 kb on - strand at 2646.201 kb on - strand at 2646.213 kb on + strand at 2646.337 kb on + strand, within EX28DRAFT_2609 at 2646.337 kb on + strand, within EX28DRAFT_2609 at 2646.338 kb on - strand, within EX28DRAFT_2609 at 2646.390 kb on - strand, within EX28DRAFT_2609 at 2646.390 kb on - strand, within EX28DRAFT_2609 at 2646.551 kb on + strand, within EX28DRAFT_2609 at 2646.552 kb on - strand, within EX28DRAFT_2609 at 2646.552 kb on - strand, within EX28DRAFT_2609 at 2646.623 kb on + strand, within EX28DRAFT_2609 at 2646.623 kb on + strand, within EX28DRAFT_2609 at 2646.623 kb on + strand, within EX28DRAFT_2609 at 2646.624 kb on - strand, within EX28DRAFT_2609
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,643,389 + -0.2 2,643,396 - +0.6 2,643,494 - +0.3 2,643,588 - EX28DRAFT_2607 0.17 +1.1 2,643,951 - EX28DRAFT_2607 0.56 +0.3 2,644,049 + EX28DRAFT_2607 0.66 -0.6 2,644,049 + EX28DRAFT_2607 0.66 +0.0 2,644,050 - EX28DRAFT_2607 0.66 -0.4 2,644,194 - EX28DRAFT_2607 0.82 +0.3 2,644,264 + EX28DRAFT_2607 0.89 -2.8 2,644,387 + +0.2 2,644,387 + -0.1 2,644,401 + +0.8 2,644,401 + -0.9 2,644,402 - -1.0 2,644,404 + -0.1 2,644,504 + EX28DRAFT_2608 0.11 +0.8 2,644,723 + EX28DRAFT_2608 0.26 +0.6 2,644,724 - EX28DRAFT_2608 0.27 -0.2 2,644,724 - EX28DRAFT_2608 0.27 -1.0 2,644,831 - EX28DRAFT_2608 0.34 +0.4 2,645,006 - EX28DRAFT_2608 0.47 +0.7 2,645,006 - EX28DRAFT_2608 0.47 -0.7 2,645,219 - EX28DRAFT_2608 0.62 +0.3 2,645,252 - EX28DRAFT_2608 0.64 +0.4 2,645,324 - EX28DRAFT_2608 0.69 -0.2 2,645,599 - EX28DRAFT_2608 0.89 -0.1 2,645,641 - +0.8 2,645,692 + +0.7 2,645,692 + +0.5 2,645,752 + -0.4 2,645,755 + +0.1 2,645,755 + -0.3 2,645,756 - -0.2 2,645,756 - -0.1 2,645,756 - +1.0 2,645,762 + -0.2 2,645,762 + -0.6 2,645,764 + +0.2 2,645,764 + +0.5 2,645,765 - +0.6 2,645,768 + +1.5 2,645,769 - -3.1 2,645,778 + -1.0 2,645,778 + -0.1 2,645,778 + -0.2 2,645,779 - -0.4 2,645,779 - +0.2 2,645,800 + +1.2 2,645,800 + -0.3 2,645,801 - +0.1 2,645,825 + +0.1 2,645,889 - -1.1 2,645,889 - -0.2 2,645,889 - -0.4 2,645,930 + +0.2 2,645,930 + -1.2 2,645,931 - +0.5 2,645,934 + -0.2 2,645,935 - -0.1 2,645,935 - -0.2 2,645,935 - -0.1 2,646,059 + -0.2 2,646,060 - +0.2 2,646,078 + -2.2 2,646,079 - -1.8 2,646,201 - +0.1 2,646,213 + +0.2 2,646,337 + EX28DRAFT_2609 0.20 +0.6 2,646,337 + EX28DRAFT_2609 0.20 +0.4 2,646,338 - EX28DRAFT_2609 0.20 +0.2 2,646,390 - EX28DRAFT_2609 0.25 +0.4 2,646,390 - EX28DRAFT_2609 0.25 +0.7 2,646,551 + EX28DRAFT_2609 0.39 +0.6 2,646,552 - EX28DRAFT_2609 0.39 +0.2 2,646,552 - EX28DRAFT_2609 0.39 -0.5 2,646,623 + EX28DRAFT_2609 0.46 +0.3 2,646,623 + EX28DRAFT_2609 0.46 -0.7 2,646,623 + EX28DRAFT_2609 0.46 +0.2 2,646,624 - EX28DRAFT_2609 0.46 -0.0
Or see this region's nucleotide sequence