Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2523 and EX28DRAFT_2524 are separated by 41 nucleotides EX28DRAFT_2524 and EX28DRAFT_2525 are separated by 101 nucleotides
EX28DRAFT_2523: EX28DRAFT_2523 - Cysteine synthase, at 2,553,852 to 2,554,901
_2523
EX28DRAFT_2524: EX28DRAFT_2524 - HAD-superfamily hydrolase, subfamily IIB, at 2,554,943 to 2,555,761
_2524
EX28DRAFT_2525: EX28DRAFT_2525 - ABC-type uncharacterized transport system, periplasmic component, at 2,555,863 to 2,557,563
_2525
Position (kb)
2554
2555
2556 Strain fitness (log2 ratio)
-1
0
1
2 at 2553.970 kb on - strand, within EX28DRAFT_2523 at 2553.970 kb on - strand, within EX28DRAFT_2523 at 2554.050 kb on - strand, within EX28DRAFT_2523 at 2554.081 kb on + strand, within EX28DRAFT_2523 at 2554.081 kb on + strand, within EX28DRAFT_2523 at 2554.082 kb on - strand, within EX28DRAFT_2523 at 2554.082 kb on - strand, within EX28DRAFT_2523 at 2554.082 kb on - strand, within EX28DRAFT_2523 at 2554.119 kb on + strand, within EX28DRAFT_2523 at 2554.246 kb on - strand, within EX28DRAFT_2523 at 2554.287 kb on + strand, within EX28DRAFT_2523 at 2554.287 kb on + strand, within EX28DRAFT_2523 at 2554.289 kb on + strand, within EX28DRAFT_2523 at 2554.289 kb on + strand, within EX28DRAFT_2523 at 2554.290 kb on - strand, within EX28DRAFT_2523 at 2554.337 kb on + strand, within EX28DRAFT_2523 at 2554.356 kb on - strand, within EX28DRAFT_2523 at 2554.398 kb on + strand, within EX28DRAFT_2523 at 2554.399 kb on - strand, within EX28DRAFT_2523 at 2554.399 kb on - strand, within EX28DRAFT_2523 at 2554.399 kb on - strand, within EX28DRAFT_2523 at 2554.449 kb on + strand, within EX28DRAFT_2523 at 2554.449 kb on + strand, within EX28DRAFT_2523 at 2554.449 kb on + strand, within EX28DRAFT_2523 at 2554.449 kb on + strand, within EX28DRAFT_2523 at 2554.696 kb on + strand, within EX28DRAFT_2523 at 2554.697 kb on - strand, within EX28DRAFT_2523 at 2554.718 kb on + strand, within EX28DRAFT_2523 at 2554.719 kb on - strand, within EX28DRAFT_2523 at 2554.719 kb on - strand, within EX28DRAFT_2523 at 2554.719 kb on - strand, within EX28DRAFT_2523 at 2554.821 kb on + strand at 2554.900 kb on - strand at 2554.916 kb on + strand at 2554.916 kb on + strand at 2554.917 kb on - strand at 2554.917 kb on - strand at 2555.093 kb on + strand, within EX28DRAFT_2524 at 2555.093 kb on + strand, within EX28DRAFT_2524 at 2555.094 kb on - strand, within EX28DRAFT_2524 at 2555.140 kb on + strand, within EX28DRAFT_2524 at 2555.140 kb on + strand, within EX28DRAFT_2524 at 2555.140 kb on + strand, within EX28DRAFT_2524 at 2555.201 kb on - strand, within EX28DRAFT_2524 at 2555.329 kb on + strand, within EX28DRAFT_2524 at 2555.329 kb on + strand, within EX28DRAFT_2524 at 2555.330 kb on - strand, within EX28DRAFT_2524 at 2555.330 kb on - strand, within EX28DRAFT_2524 at 2555.330 kb on - strand, within EX28DRAFT_2524 at 2555.366 kb on - strand, within EX28DRAFT_2524 at 2555.373 kb on + strand, within EX28DRAFT_2524 at 2555.406 kb on - strand, within EX28DRAFT_2524 at 2555.406 kb on - strand, within EX28DRAFT_2524 at 2555.544 kb on - strand, within EX28DRAFT_2524 at 2555.766 kb on - strand at 2555.787 kb on + strand at 2556.063 kb on - strand, within EX28DRAFT_2525 at 2556.182 kb on + strand, within EX28DRAFT_2525 at 2556.616 kb on + strand, within EX28DRAFT_2525 at 2556.616 kb on + strand, within EX28DRAFT_2525 at 2556.617 kb on - strand, within EX28DRAFT_2525
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 2,553,970 - EX28DRAFT_2523 0.11 +0.9 2,553,970 - EX28DRAFT_2523 0.11 +0.3 2,554,050 - EX28DRAFT_2523 0.19 +2.0 2,554,081 + EX28DRAFT_2523 0.22 -0.2 2,554,081 + EX28DRAFT_2523 0.22 -0.2 2,554,082 - EX28DRAFT_2523 0.22 +0.0 2,554,082 - EX28DRAFT_2523 0.22 +0.0 2,554,082 - EX28DRAFT_2523 0.22 -0.9 2,554,119 + EX28DRAFT_2523 0.25 +0.1 2,554,246 - EX28DRAFT_2523 0.38 +0.4 2,554,287 + EX28DRAFT_2523 0.41 +0.0 2,554,287 + EX28DRAFT_2523 0.41 +0.9 2,554,289 + EX28DRAFT_2523 0.42 +0.7 2,554,289 + EX28DRAFT_2523 0.42 +0.9 2,554,290 - EX28DRAFT_2523 0.42 -0.5 2,554,337 + EX28DRAFT_2523 0.46 -0.1 2,554,356 - EX28DRAFT_2523 0.48 -0.1 2,554,398 + EX28DRAFT_2523 0.52 +0.0 2,554,399 - EX28DRAFT_2523 0.52 -0.2 2,554,399 - EX28DRAFT_2523 0.52 +0.5 2,554,399 - EX28DRAFT_2523 0.52 +0.6 2,554,449 + EX28DRAFT_2523 0.57 -0.2 2,554,449 + EX28DRAFT_2523 0.57 -0.2 2,554,449 + EX28DRAFT_2523 0.57 -0.1 2,554,449 + EX28DRAFT_2523 0.57 -0.0 2,554,696 + EX28DRAFT_2523 0.80 -1.0 2,554,697 - EX28DRAFT_2523 0.80 +0.2 2,554,718 + EX28DRAFT_2523 0.82 -0.6 2,554,719 - EX28DRAFT_2523 0.83 +0.2 2,554,719 - EX28DRAFT_2523 0.83 +0.1 2,554,719 - EX28DRAFT_2523 0.83 +0.6 2,554,821 + +0.0 2,554,900 - +0.2 2,554,916 + -0.3 2,554,916 + +1.0 2,554,917 - -0.4 2,554,917 - +0.1 2,555,093 + EX28DRAFT_2524 0.18 +0.5 2,555,093 + EX28DRAFT_2524 0.18 -0.1 2,555,094 - EX28DRAFT_2524 0.18 +0.4 2,555,140 + EX28DRAFT_2524 0.24 -0.0 2,555,140 + EX28DRAFT_2524 0.24 -0.5 2,555,140 + EX28DRAFT_2524 0.24 +0.6 2,555,201 - EX28DRAFT_2524 0.32 -0.5 2,555,329 + EX28DRAFT_2524 0.47 -0.1 2,555,329 + EX28DRAFT_2524 0.47 +0.4 2,555,330 - EX28DRAFT_2524 0.47 -1.5 2,555,330 - EX28DRAFT_2524 0.47 +0.7 2,555,330 - EX28DRAFT_2524 0.47 +0.9 2,555,366 - EX28DRAFT_2524 0.52 +0.4 2,555,373 + EX28DRAFT_2524 0.53 +0.3 2,555,406 - EX28DRAFT_2524 0.57 +0.3 2,555,406 - EX28DRAFT_2524 0.57 +0.3 2,555,544 - EX28DRAFT_2524 0.73 +1.7 2,555,766 - -0.8 2,555,787 + +0.3 2,556,063 - EX28DRAFT_2525 0.12 -1.1 2,556,182 + EX28DRAFT_2525 0.19 +0.0 2,556,616 + EX28DRAFT_2525 0.44 +0.1 2,556,616 + EX28DRAFT_2525 0.44 -1.2 2,556,617 - EX28DRAFT_2525 0.44 -0.0
Or see this region's nucleotide sequence