Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1689 and EX28DRAFT_1690 are separated by 335 nucleotides EX28DRAFT_1690 and EX28DRAFT_1691 are separated by 4 nucleotides EX28DRAFT_1691 and EX28DRAFT_1692 are separated by 29 nucleotides EX28DRAFT_1692 and EX28DRAFT_1693 are separated by 191 nucleotides
EX28DRAFT_1689: EX28DRAFT_1689 - FOG: EAL domain, at 1,701,539 to 1,702,759
_1689
EX28DRAFT_1690: EX28DRAFT_1690 - hypothetical protein, at 1,703,095 to 1,703,334
_1690
EX28DRAFT_1691: EX28DRAFT_1691 - hypothetical protein, at 1,703,339 to 1,703,659
_1691
EX28DRAFT_1692: EX28DRAFT_1692 - Biofilm development protein YmgB/AriR, at 1,703,689 to 1,703,967
_1692
EX28DRAFT_1693: EX28DRAFT_1693 - formate dehydrogenase, alpha subunit, archaeal-type, at 1,704,159 to 1,706,309
_1693
Position (kb) 1703
1704 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1702.103 kb on + strand, within EX28DRAFT_1689 at 1702.116 kb on + strand, within EX28DRAFT_1689 at 1702.146 kb on + strand, within EX28DRAFT_1689 at 1702.147 kb on - strand, within EX28DRAFT_1689 at 1702.211 kb on - strand, within EX28DRAFT_1689 at 1702.338 kb on + strand, within EX28DRAFT_1689 at 1702.339 kb on - strand, within EX28DRAFT_1689 at 1702.339 kb on - strand, within EX28DRAFT_1689 at 1702.339 kb on - strand, within EX28DRAFT_1689 at 1702.398 kb on + strand, within EX28DRAFT_1689 at 1702.399 kb on - strand, within EX28DRAFT_1689 at 1702.399 kb on - strand, within EX28DRAFT_1689 at 1702.399 kb on - strand, within EX28DRAFT_1689 at 1702.399 kb on - strand, within EX28DRAFT_1689 at 1702.411 kb on - strand, within EX28DRAFT_1689 at 1702.575 kb on + strand, within EX28DRAFT_1689 at 1702.575 kb on + strand, within EX28DRAFT_1689 at 1702.576 kb on - strand, within EX28DRAFT_1689 at 1702.730 kb on - strand at 1702.730 kb on - strand at 1702.800 kb on - strand at 1702.803 kb on + strand at 1702.804 kb on - strand at 1702.811 kb on - strand at 1702.811 kb on - strand at 1702.812 kb on + strand at 1702.895 kb on - strand at 1703.143 kb on + strand, within EX28DRAFT_1690 at 1703.143 kb on + strand, within EX28DRAFT_1690 at 1703.300 kb on - strand, within EX28DRAFT_1690 at 1703.607 kb on + strand, within EX28DRAFT_1691 at 1703.607 kb on + strand, within EX28DRAFT_1691 at 1703.608 kb on - strand, within EX28DRAFT_1691 at 1703.617 kb on - strand, within EX28DRAFT_1691 at 1703.675 kb on + strand at 1703.675 kb on + strand at 1703.675 kb on + strand at 1703.676 kb on - strand at 1703.676 kb on - strand at 1703.700 kb on + strand at 1703.814 kb on - strand, within EX28DRAFT_1692 at 1703.966 kb on - strand at 1703.966 kb on - strand at 1704.059 kb on - strand at 1704.143 kb on - strand at 1704.204 kb on - strand at 1704.227 kb on + strand at 1704.234 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 1,702,103 + EX28DRAFT_1689 0.46 +0.0 1,702,116 + EX28DRAFT_1689 0.47 -0.7 1,702,146 + EX28DRAFT_1689 0.50 -0.0 1,702,147 - EX28DRAFT_1689 0.50 +0.2 1,702,211 - EX28DRAFT_1689 0.55 -0.4 1,702,338 + EX28DRAFT_1689 0.65 +0.5 1,702,339 - EX28DRAFT_1689 0.66 +0.5 1,702,339 - EX28DRAFT_1689 0.66 -0.1 1,702,339 - EX28DRAFT_1689 0.66 +0.4 1,702,398 + EX28DRAFT_1689 0.70 +0.1 1,702,399 - EX28DRAFT_1689 0.70 +0.0 1,702,399 - EX28DRAFT_1689 0.70 +1.0 1,702,399 - EX28DRAFT_1689 0.70 +0.3 1,702,399 - EX28DRAFT_1689 0.70 -0.2 1,702,411 - EX28DRAFT_1689 0.71 -0.3 1,702,575 + EX28DRAFT_1689 0.85 -0.5 1,702,575 + EX28DRAFT_1689 0.85 -2.6 1,702,576 - EX28DRAFT_1689 0.85 -0.8 1,702,730 - -3.0 1,702,730 - +0.4 1,702,800 - -0.2 1,702,803 + -0.9 1,702,804 - +1.0 1,702,811 - +0.3 1,702,811 - -0.2 1,702,812 + -3.0 1,702,895 - -1.3 1,703,143 + EX28DRAFT_1690 0.20 -0.9 1,703,143 + EX28DRAFT_1690 0.20 -0.7 1,703,300 - EX28DRAFT_1690 0.85 -0.7 1,703,607 + EX28DRAFT_1691 0.83 -1.0 1,703,607 + EX28DRAFT_1691 0.83 -0.5 1,703,608 - EX28DRAFT_1691 0.84 -0.1 1,703,617 - EX28DRAFT_1691 0.87 -0.0 1,703,675 + +0.0 1,703,675 + +0.5 1,703,675 + -0.9 1,703,676 - +0.1 1,703,676 - -0.1 1,703,700 + +0.4 1,703,814 - EX28DRAFT_1692 0.45 -0.2 1,703,966 - +0.3 1,703,966 - +0.3 1,704,059 - +0.5 1,704,143 - +0.8 1,704,204 - -0.3 1,704,227 + +0.9 1,704,234 - -0.7
Or see this region's nucleotide sequence