Experiment: M9 with sucrose; no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0202 and EX28DRAFT_0203 are separated by 63 nucleotides EX28DRAFT_0203 and EX28DRAFT_0204 are separated by 92 nucleotides EX28DRAFT_0204 and EX28DRAFT_0205 are separated by 172 nucleotides
EX28DRAFT_0202: EX28DRAFT_0202 - Protein of unknown function (DUF2919), at 157,293 to 157,742
_0202
EX28DRAFT_0203: EX28DRAFT_0203 - Protein of unknown function (DUF1131), at 157,806 to 158,381
_0203
EX28DRAFT_0204: EX28DRAFT_0204 - Dyp-type peroxidase family, at 158,474 to 159,373
_0204
EX28DRAFT_0205: EX28DRAFT_0205 - sulfate/thiosulfate-binding protein, at 159,546 to 160,559
_0205
Position (kb) 158
159
160 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 157.787 kb on - strand at 157.878 kb on - strand, within EX28DRAFT_0203 at 158.045 kb on + strand, within EX28DRAFT_0203 at 158.046 kb on - strand, within EX28DRAFT_0203 at 158.046 kb on - strand, within EX28DRAFT_0203 at 158.056 kb on - strand, within EX28DRAFT_0203 at 158.058 kb on + strand, within EX28DRAFT_0203 at 158.165 kb on - strand, within EX28DRAFT_0203 at 158.193 kb on + strand, within EX28DRAFT_0203 at 158.194 kb on - strand, within EX28DRAFT_0203 at 158.194 kb on - strand, within EX28DRAFT_0203 at 158.195 kb on + strand, within EX28DRAFT_0203 at 158.256 kb on - strand, within EX28DRAFT_0203 at 158.283 kb on + strand, within EX28DRAFT_0203 at 158.283 kb on + strand, within EX28DRAFT_0203 at 158.284 kb on - strand, within EX28DRAFT_0203 at 158.342 kb on + strand at 158.343 kb on - strand at 158.379 kb on + strand at 158.379 kb on + strand at 158.419 kb on - strand at 158.420 kb on + strand at 158.423 kb on + strand at 158.458 kb on + strand at 158.459 kb on - strand at 158.543 kb on - strand at 158.787 kb on + strand, within EX28DRAFT_0204 at 158.842 kb on - strand, within EX28DRAFT_0204 at 158.981 kb on + strand, within EX28DRAFT_0204 at 158.981 kb on + strand, within EX28DRAFT_0204 at 158.982 kb on - strand, within EX28DRAFT_0204 at 159.065 kb on - strand, within EX28DRAFT_0204 at 159.067 kb on + strand, within EX28DRAFT_0204 at 159.068 kb on - strand, within EX28DRAFT_0204 at 159.239 kb on + strand, within EX28DRAFT_0204 at 159.241 kb on + strand, within EX28DRAFT_0204 at 159.241 kb on + strand, within EX28DRAFT_0204 at 159.335 kb on + strand at 159.336 kb on - strand at 159.336 kb on - strand at 159.372 kb on - strand at 159.372 kb on - strand at 159.372 kb on - strand at 159.434 kb on - strand at 159.470 kb on + strand at 159.497 kb on + strand at 159.503 kb on + strand at 159.503 kb on + strand at 159.503 kb on + strand at 159.504 kb on - strand at 159.506 kb on + strand at 159.507 kb on - strand at 159.512 kb on + strand at 159.512 kb on + strand at 159.513 kb on - strand at 159.513 kb on - strand at 159.513 kb on - strand at 159.514 kb on + strand at 159.514 kb on + strand at 159.514 kb on + strand at 159.514 kb on + strand at 159.514 kb on + strand at 159.515 kb on - strand at 159.515 kb on - strand at 159.515 kb on - strand at 159.515 kb on - strand at 159.515 kb on - strand at 159.515 kb on - strand at 159.519 kb on + strand at 159.520 kb on - strand at 159.533 kb on - strand at 159.535 kb on - strand at 159.554 kb on + strand at 159.629 kb on - strand at 159.672 kb on - strand, within EX28DRAFT_0205 at 159.801 kb on + strand, within EX28DRAFT_0205 at 159.802 kb on - strand, within EX28DRAFT_0205 at 159.802 kb on - strand, within EX28DRAFT_0205 at 160.023 kb on - strand, within EX28DRAFT_0205 at 160.026 kb on + strand, within EX28DRAFT_0205 at 160.350 kb on + strand, within EX28DRAFT_0205 at 160.351 kb on - strand, within EX28DRAFT_0205 at 160.356 kb on + strand, within EX28DRAFT_0205
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with sucrose; no stress control remove 157,787 - -0.3 157,878 - EX28DRAFT_0203 0.12 +0.8 158,045 + EX28DRAFT_0203 0.41 +1.8 158,046 - EX28DRAFT_0203 0.42 -0.1 158,046 - EX28DRAFT_0203 0.42 +0.1 158,056 - EX28DRAFT_0203 0.43 -0.9 158,058 + EX28DRAFT_0203 0.44 -0.2 158,165 - EX28DRAFT_0203 0.62 -0.2 158,193 + EX28DRAFT_0203 0.67 +0.5 158,194 - EX28DRAFT_0203 0.67 -3.3 158,194 - EX28DRAFT_0203 0.67 -2.3 158,195 + EX28DRAFT_0203 0.68 +0.4 158,256 - EX28DRAFT_0203 0.78 +0.1 158,283 + EX28DRAFT_0203 0.83 +0.3 158,283 + EX28DRAFT_0203 0.83 +0.3 158,284 - EX28DRAFT_0203 0.83 +1.3 158,342 + -0.9 158,343 - -0.2 158,379 + +0.7 158,379 + +0.4 158,419 - +0.3 158,420 + +0.2 158,423 + +0.4 158,458 + -1.7 158,459 - -1.3 158,543 - +0.3 158,787 + EX28DRAFT_0204 0.35 +0.8 158,842 - EX28DRAFT_0204 0.41 +1.2 158,981 + EX28DRAFT_0204 0.56 -0.2 158,981 + EX28DRAFT_0204 0.56 -0.2 158,982 - EX28DRAFT_0204 0.56 +0.6 159,065 - EX28DRAFT_0204 0.66 +1.1 159,067 + EX28DRAFT_0204 0.66 +0.2 159,068 - EX28DRAFT_0204 0.66 +0.6 159,239 + EX28DRAFT_0204 0.85 +0.8 159,241 + EX28DRAFT_0204 0.85 +0.4 159,241 + EX28DRAFT_0204 0.85 +0.4 159,335 + +0.3 159,336 - +0.3 159,336 - -0.1 159,372 - +1.0 159,372 - -0.5 159,372 - +0.1 159,434 - -0.3 159,470 + +0.3 159,497 + -1.3 159,503 + +1.1 159,503 + -0.3 159,503 + -1.9 159,504 - +1.7 159,506 + -0.0 159,507 - -0.3 159,512 + -0.2 159,512 + +0.3 159,513 - +0.9 159,513 - -0.3 159,513 - +0.1 159,514 + -0.4 159,514 + +0.7 159,514 + -0.5 159,514 + +0.5 159,514 + -1.4 159,515 - -0.4 159,515 - -0.7 159,515 - -0.8 159,515 - +0.1 159,515 - -0.6 159,515 - +0.2 159,519 + +0.4 159,520 - -1.8 159,533 - -2.6 159,535 - -0.3 159,554 + -0.0 159,629 - -0.2 159,672 - EX28DRAFT_0205 0.12 -1.4 159,801 + EX28DRAFT_0205 0.25 +0.1 159,802 - EX28DRAFT_0205 0.25 -0.3 159,802 - EX28DRAFT_0205 0.25 -0.2 160,023 - EX28DRAFT_0205 0.47 +0.5 160,026 + EX28DRAFT_0205 0.47 +0.0 160,350 + EX28DRAFT_0205 0.79 +0.1 160,351 - EX28DRAFT_0205 0.79 -0.0 160,356 + EX28DRAFT_0205 0.80 -1.3
Or see this region's nucleotide sequence