Strain Fitness in Bosea sp. OAE506 around ABIE41_RS12405

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS12400 and ABIE41_RS12405 are separated by 91 nucleotidesABIE41_RS12405 and ABIE41_RS12410 are separated by 167 nucleotides ABIE41_RS12400: ABIE41_RS12400 - energy-dependent translational throttle protein EttA, at 2,538,503 to 2,540,155 _RS12400 ABIE41_RS12405: ABIE41_RS12405 - MarR family transcriptional regulator, at 2,540,247 to 2,540,690 _RS12405 ABIE41_RS12410: ABIE41_RS12410 - alpha/beta hydrolase, at 2,540,858 to 2,541,862 _RS12410 Position (kb) 2540 2541Strain fitness (log2 ratio) -2 -1 0 1at 2539.766 kb on + strand, within ABIE41_RS12400at 2539.922 kb on - strand, within ABIE41_RS12400at 2540.136 kb on - strandat 2540.136 kb on - strandat 2540.136 kb on - strandat 2540.136 kb on - strandat 2540.558 kb on - strand, within ABIE41_RS12405at 2540.558 kb on - strand, within ABIE41_RS12405at 2540.567 kb on - strand, within ABIE41_RS12405at 2540.599 kb on + strand, within ABIE41_RS12405at 2540.600 kb on - strand, within ABIE41_RS12405at 2540.630 kb on - strand, within ABIE41_RS12405at 2541.038 kb on + strand, within ABIE41_RS12410at 2541.039 kb on - strand, within ABIE41_RS12410at 2541.039 kb on - strand, within ABIE41_RS12410at 2541.069 kb on - strand, within ABIE41_RS12410at 2541.069 kb on - strand, within ABIE41_RS12410at 2541.173 kb on - strand, within ABIE41_RS12410at 2541.255 kb on - strand, within ABIE41_RS12410at 2541.255 kb on - strand, within ABIE41_RS12410at 2541.348 kb on - strand, within ABIE41_RS12410at 2541.536 kb on + strand, within ABIE41_RS12410at 2541.537 kb on - strand, within ABIE41_RS12410at 2541.584 kb on + strand, within ABIE41_RS12410at 2541.584 kb on + strand, within ABIE41_RS12410

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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2,539,766 + ABIE41_RS12400 0.76 +1.3
2,539,922 - ABIE41_RS12400 0.86 +1.0
2,540,136 - +0.4
2,540,136 - +0.3
2,540,136 - -2.6
2,540,136 - -0.0
2,540,558 - ABIE41_RS12405 0.70 -1.2
2,540,558 - ABIE41_RS12405 0.70 -0.2
2,540,567 - ABIE41_RS12405 0.72 -2.2
2,540,599 + ABIE41_RS12405 0.79 -1.9
2,540,600 - ABIE41_RS12405 0.80 +0.4
2,540,630 - ABIE41_RS12405 0.86 -2.5
2,541,038 + ABIE41_RS12410 0.18 -1.1
2,541,039 - ABIE41_RS12410 0.18 -0.7
2,541,039 - ABIE41_RS12410 0.18 -1.6
2,541,069 - ABIE41_RS12410 0.21 +0.9
2,541,069 - ABIE41_RS12410 0.21 +1.0
2,541,173 - ABIE41_RS12410 0.31 +1.4
2,541,255 - ABIE41_RS12410 0.40 -1.8
2,541,255 - ABIE41_RS12410 0.40 +0.5
2,541,348 - ABIE41_RS12410 0.49 +0.6
2,541,536 + ABIE41_RS12410 0.67 +1.5
2,541,537 - ABIE41_RS12410 0.68 +1.5
2,541,584 + ABIE41_RS12410 0.72 +1.1
2,541,584 + ABIE41_RS12410 0.72 +0.9

Or see this region's nucleotide sequence