Strain Fitness in Bosea sp. OAE506 around ABIE41_RS09020

Experiment: m-Inositol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS09010 and ABIE41_RS09015 are separated by 117 nucleotidesABIE41_RS09015 and ABIE41_RS09020 are separated by 124 nucleotidesABIE41_RS09020 and ABIE41_RS09025 are separated by 110 nucleotides ABIE41_RS09010: ABIE41_RS09010 - NAD(P)H-dependent oxidoreductase, at 1,867,427 to 1,868,008 _RS09010 ABIE41_RS09015: ABIE41_RS09015 - MarR family transcriptional regulator, at 1,868,126 to 1,868,608 _RS09015 ABIE41_RS09020: ABIE41_RS09020 - DMT family transporter, at 1,868,733 to 1,869,650 _RS09020 ABIE41_RS09025: ABIE41_RS09025 - potassium transporter Kup, at 1,869,761 to 1,871,761 _RS09025 Position (kb) 1868 1869 1870Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1867.818 kb on - strand, within ABIE41_RS09010at 1867.919 kb on + strand, within ABIE41_RS09010at 1867.931 kb on + strand, within ABIE41_RS09010at 1867.931 kb on + strand, within ABIE41_RS09010at 1867.932 kb on - strand, within ABIE41_RS09010at 1867.932 kb on - strand, within ABIE41_RS09010at 1868.088 kb on - strandat 1868.088 kb on - strandat 1868.858 kb on + strand, within ABIE41_RS09020at 1868.858 kb on + strand, within ABIE41_RS09020at 1868.859 kb on - strand, within ABIE41_RS09020at 1868.890 kb on - strand, within ABIE41_RS09020at 1869.240 kb on + strand, within ABIE41_RS09020at 1869.240 kb on + strand, within ABIE41_RS09020at 1869.240 kb on + strand, within ABIE41_RS09020at 1869.240 kb on + strand, within ABIE41_RS09020at 1869.241 kb on - strand, within ABIE41_RS09020at 1869.279 kb on + strand, within ABIE41_RS09020at 1869.280 kb on - strand, within ABIE41_RS09020at 1869.306 kb on + strand, within ABIE41_RS09020at 1869.306 kb on + strand, within ABIE41_RS09020at 1869.486 kb on + strand, within ABIE41_RS09020at 1869.763 kb on - strandat 1869.763 kb on - strandat 1869.855 kb on + strandat 1869.856 kb on - strandat 1869.856 kb on - strandat 1870.011 kb on + strand, within ABIE41_RS09025

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Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
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1,867,818 - ABIE41_RS09010 0.67 +0.3
1,867,919 + ABIE41_RS09010 0.85 -0.8
1,867,931 + ABIE41_RS09010 0.87 -0.8
1,867,931 + ABIE41_RS09010 0.87 -0.2
1,867,932 - ABIE41_RS09010 0.87 -0.3
1,867,932 - ABIE41_RS09010 0.87 -0.0
1,868,088 - -0.5
1,868,088 - -0.0
1,868,858 + ABIE41_RS09020 0.14 +0.1
1,868,858 + ABIE41_RS09020 0.14 -0.9
1,868,859 - ABIE41_RS09020 0.14 -0.1
1,868,890 - ABIE41_RS09020 0.17 -0.2
1,869,240 + ABIE41_RS09020 0.55 +1.0
1,869,240 + ABIE41_RS09020 0.55 +0.8
1,869,240 + ABIE41_RS09020 0.55 +0.2
1,869,240 + ABIE41_RS09020 0.55 -0.0
1,869,241 - ABIE41_RS09020 0.55 +2.0
1,869,279 + ABIE41_RS09020 0.59 -0.5
1,869,280 - ABIE41_RS09020 0.60 +0.1
1,869,306 + ABIE41_RS09020 0.62 -1.0
1,869,306 + ABIE41_RS09020 0.62 +2.1
1,869,486 + ABIE41_RS09020 0.82 -0.5
1,869,763 - -3.0
1,869,763 - -0.0
1,869,855 + +0.6
1,869,856 - +1.0
1,869,856 - +1.8
1,870,011 + ABIE41_RS09025 0.12 -0.0

Or see this region's nucleotide sequence