Strain Fitness in Bosea sp. OAE506 around ABIE41_RS01575

Experiment: m-Inositol (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntABIE41_RS01565 and ABIE41_RS01570 overlap by 4 nucleotidesABIE41_RS01570 and ABIE41_RS01575 overlap by 4 nucleotidesABIE41_RS01575 and ABIE41_RS01580 are separated by 140 nucleotides ABIE41_RS01565: ABIE41_RS01565 - ABC transporter permease, at 311,963 to 312,763 _RS01565 ABIE41_RS01570: ABIE41_RS01570 - ABC transporter permease, at 312,760 to 313,626 _RS01570 ABIE41_RS01575: ABIE41_RS01575 - ABC transporter ATP-binding protein, at 313,623 to 314,666 _RS01575 ABIE41_RS01580: ABIE41_RS01580 - polyamine ABC transporter substrate-binding protein, at 314,807 to 315,844 _RS01580 Position (kb) 313 314 315Strain fitness (log2 ratio) -2 -1 0 1 2at 312.657 kb on + strand, within ABIE41_RS01565at 312.657 kb on + strand, within ABIE41_RS01565at 312.657 kb on + strand, within ABIE41_RS01565at 312.658 kb on - strand, within ABIE41_RS01565at 312.658 kb on - strand, within ABIE41_RS01565at 312.658 kb on - strand, within ABIE41_RS01565at 312.658 kb on - strand, within ABIE41_RS01565at 312.780 kb on - strandat 312.893 kb on + strand, within ABIE41_RS01570at 312.893 kb on + strand, within ABIE41_RS01570at 312.894 kb on - strand, within ABIE41_RS01570at 313.350 kb on + strand, within ABIE41_RS01570at 313.351 kb on - strand, within ABIE41_RS01570at 313.351 kb on - strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.352 kb on + strand, within ABIE41_RS01570at 313.353 kb on - strand, within ABIE41_RS01570at 313.353 kb on - strand, within ABIE41_RS01570at 313.353 kb on - strand, within ABIE41_RS01570at 313.353 kb on - strand, within ABIE41_RS01570at 313.353 kb on - strand, within ABIE41_RS01570at 313.353 kb on - strand, within ABIE41_RS01570at 313.353 kb on - strand, within ABIE41_RS01570at 313.353 kb on - strand, within ABIE41_RS01570at 313.353 kb on - strand, within ABIE41_RS01570at 313.353 kb on - strand, within ABIE41_RS01570at 313.436 kb on + strand, within ABIE41_RS01570at 313.436 kb on + strand, within ABIE41_RS01570at 313.436 kb on + strand, within ABIE41_RS01570at 313.437 kb on - strand, within ABIE41_RS01570at 313.496 kb on + strand, within ABIE41_RS01570at 313.496 kb on + strand, within ABIE41_RS01570at 313.496 kb on + strand, within ABIE41_RS01570at 313.496 kb on + strand, within ABIE41_RS01570at 313.497 kb on - strand, within ABIE41_RS01570at 313.497 kb on - strand, within ABIE41_RS01570at 313.497 kb on - strand, within ABIE41_RS01570at 313.511 kb on + strand, within ABIE41_RS01570at 313.511 kb on + strand, within ABIE41_RS01570at 313.512 kb on - strand, within ABIE41_RS01570at 314.002 kb on + strand, within ABIE41_RS01575at 314.002 kb on + strand, within ABIE41_RS01575at 314.002 kb on + strand, within ABIE41_RS01575at 314.002 kb on + strand, within ABIE41_RS01575at 314.002 kb on + strand, within ABIE41_RS01575at 314.002 kb on + strand, within ABIE41_RS01575at 314.003 kb on - strand, within ABIE41_RS01575at 314.003 kb on - strand, within ABIE41_RS01575at 314.003 kb on - strand, within ABIE41_RS01575at 314.003 kb on - strand, within ABIE41_RS01575at 314.003 kb on - strand, within ABIE41_RS01575at 314.003 kb on - strand, within ABIE41_RS01575at 314.003 kb on - strand, within ABIE41_RS01575at 314.003 kb on - strand, within ABIE41_RS01575at 314.327 kb on + strand, within ABIE41_RS01575at 314.327 kb on + strand, within ABIE41_RS01575at 314.416 kb on + strand, within ABIE41_RS01575at 314.416 kb on + strand, within ABIE41_RS01575at 314.416 kb on + strand, within ABIE41_RS01575at 314.416 kb on + strand, within ABIE41_RS01575at 314.416 kb on + strand, within ABIE41_RS01575at 314.416 kb on + strand, within ABIE41_RS01575at 314.416 kb on + strand, within ABIE41_RS01575at 314.416 kb on + strand, within ABIE41_RS01575at 314.416 kb on + strand, within ABIE41_RS01575at 314.675 kb on - strandat 314.808 kb on + strandat 314.809 kb on - strandat 314.809 kb on - strandat 314.907 kb on + strandat 314.907 kb on + strandat 314.989 kb on + strand, within ABIE41_RS01580at 315.222 kb on + strand, within ABIE41_RS01580at 315.222 kb on + strand, within ABIE41_RS01580at 315.223 kb on - strand, within ABIE41_RS01580at 315.223 kb on - strand, within ABIE41_RS01580at 315.333 kb on + strand, within ABIE41_RS01580at 315.333 kb on + strand, within ABIE41_RS01580at 315.334 kb on - strand, within ABIE41_RS01580at 315.373 kb on - strand, within ABIE41_RS01580at 315.373 kb on - strand, within ABIE41_RS01580at 315.373 kb on - strand, within ABIE41_RS01580at 315.373 kb on - strand, within ABIE41_RS01580at 315.445 kb on - strand, within ABIE41_RS01580at 315.445 kb on - strand, within ABIE41_RS01580at 315.522 kb on + strand, within ABIE41_RS01580at 315.605 kb on + strand, within ABIE41_RS01580at 315.665 kb on + strand, within ABIE41_RS01580at 315.666 kb on - strand, within ABIE41_RS01580

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m-Inositol (C)
remove
312,657 + ABIE41_RS01565 0.87 +1.1
312,657 + ABIE41_RS01565 0.87 +1.3
312,657 + ABIE41_RS01565 0.87 +0.6
312,658 - ABIE41_RS01565 0.87 -0.1
312,658 - ABIE41_RS01565 0.87 -0.9
312,658 - ABIE41_RS01565 0.87 +1.3
312,658 - ABIE41_RS01565 0.87 +0.5
312,780 - -2.6
312,893 + ABIE41_RS01570 0.15 +0.4
312,893 + ABIE41_RS01570 0.15 -0.6
312,894 - ABIE41_RS01570 0.15 -2.7
313,350 + ABIE41_RS01570 0.68 +1.0
313,351 - ABIE41_RS01570 0.68 -1.0
313,351 - ABIE41_RS01570 0.68 +0.6
313,352 + ABIE41_RS01570 0.68 -0.3
313,352 + ABIE41_RS01570 0.68 +0.5
313,352 + ABIE41_RS01570 0.68 -1.5
313,352 + ABIE41_RS01570 0.68 -1.0
313,352 + ABIE41_RS01570 0.68 -0.1
313,352 + ABIE41_RS01570 0.68 +1.6
313,352 + ABIE41_RS01570 0.68 +0.8
313,352 + ABIE41_RS01570 0.68 -0.1
313,352 + ABIE41_RS01570 0.68 +1.5
313,352 + ABIE41_RS01570 0.68 +0.1
313,352 + ABIE41_RS01570 0.68 -1.0
313,353 - ABIE41_RS01570 0.68 -2.1
313,353 - ABIE41_RS01570 0.68 +0.4
313,353 - ABIE41_RS01570 0.68 -0.3
313,353 - ABIE41_RS01570 0.68 +0.3
313,353 - ABIE41_RS01570 0.68 -1.0
313,353 - ABIE41_RS01570 0.68 -0.2
313,353 - ABIE41_RS01570 0.68 +1.6
313,353 - ABIE41_RS01570 0.68 -0.4
313,353 - ABIE41_RS01570 0.68 +1.6
313,353 - ABIE41_RS01570 0.68 +0.6
313,436 + ABIE41_RS01570 0.78 +0.9
313,436 + ABIE41_RS01570 0.78 +0.3
313,436 + ABIE41_RS01570 0.78 -1.7
313,437 - ABIE41_RS01570 0.78 +0.4
313,496 + ABIE41_RS01570 0.85 +1.3
313,496 + ABIE41_RS01570 0.85 +0.2
313,496 + ABIE41_RS01570 0.85 -1.5
313,496 + ABIE41_RS01570 0.85 -1.4
313,497 - ABIE41_RS01570 0.85 -0.5
313,497 - ABIE41_RS01570 0.85 -0.4
313,497 - ABIE41_RS01570 0.85 -0.2
313,511 + ABIE41_RS01570 0.87 -1.2
313,511 + ABIE41_RS01570 0.87 +0.6
313,512 - ABIE41_RS01570 0.87 +0.4
314,002 + ABIE41_RS01575 0.36 +0.2
314,002 + ABIE41_RS01575 0.36 +0.7
314,002 + ABIE41_RS01575 0.36 +1.4
314,002 + ABIE41_RS01575 0.36 +1.1
314,002 + ABIE41_RS01575 0.36 +0.3
314,002 + ABIE41_RS01575 0.36 -0.6
314,003 - ABIE41_RS01575 0.36 -0.0
314,003 - ABIE41_RS01575 0.36 -0.3
314,003 - ABIE41_RS01575 0.36 +1.9
314,003 - ABIE41_RS01575 0.36 +0.3
314,003 - ABIE41_RS01575 0.36 +0.7
314,003 - ABIE41_RS01575 0.36 +1.9
314,003 - ABIE41_RS01575 0.36 +0.2
314,003 - ABIE41_RS01575 0.36 +0.0
314,327 + ABIE41_RS01575 0.67 +0.8
314,327 + ABIE41_RS01575 0.67 -0.2
314,416 + ABIE41_RS01575 0.76 -1.0
314,416 + ABIE41_RS01575 0.76 -0.1
314,416 + ABIE41_RS01575 0.76 +0.4
314,416 + ABIE41_RS01575 0.76 -0.2
314,416 + ABIE41_RS01575 0.76 +0.7
314,416 + ABIE41_RS01575 0.76 -1.7
314,416 + ABIE41_RS01575 0.76 -1.2
314,416 + ABIE41_RS01575 0.76 +0.3
314,416 + ABIE41_RS01575 0.76 +0.2
314,675 - -1.2
314,808 + +1.2
314,809 - -0.2
314,809 - +0.6
314,907 + +0.2
314,907 + -0.0
314,989 + ABIE41_RS01580 0.18 -0.4
315,222 + ABIE41_RS01580 0.40 -0.6
315,222 + ABIE41_RS01580 0.40 +0.6
315,223 - ABIE41_RS01580 0.40 +0.3
315,223 - ABIE41_RS01580 0.40 +1.9
315,333 + ABIE41_RS01580 0.51 -2.2
315,333 + ABIE41_RS01580 0.51 -0.4
315,334 - ABIE41_RS01580 0.51 +0.4
315,373 - ABIE41_RS01580 0.55 +0.4
315,373 - ABIE41_RS01580 0.55 +0.0
315,373 - ABIE41_RS01580 0.55 -0.1
315,373 - ABIE41_RS01580 0.55 +0.2
315,445 - ABIE41_RS01580 0.61 +0.0
315,445 - ABIE41_RS01580 0.61 -0.9
315,522 + ABIE41_RS01580 0.69 +0.5
315,605 + ABIE41_RS01580 0.77 -1.4
315,665 + ABIE41_RS01580 0.83 -1.4
315,666 - ABIE41_RS01580 0.83 -0.3

Or see this region's nucleotide sequence