Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS14685

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
2,876,502	+				-1.0
2,876,502	+				-0.3
2,876,502	+				+2.8
2,876,502	+				+0.5
2,876,502	+				-1.8
2,876,502	+				-0.1
2,876,503	-				+1.1
2,876,503	-				-0.9
2,876,503	-				+0.4
2,876,577	+				+1.1
2,876,603	+				-0.8
2,876,603	+				+0.4
2,876,646	+				-2.8
2,876,679	+				-1.0
2,876,680	-				+1.1
2,876,715	-		ABIE40_RS14680	0.12	-0.4
2,876,715	-		ABIE40_RS14680	0.12	+0.3
2,876,798	-		ABIE40_RS14680	0.28	-0.5
2,876,834	+		ABIE40_RS14680	0.34	-0.6
2,876,834	+		ABIE40_RS14680	0.34	-1.4
2,876,834	+		ABIE40_RS14680	0.34	-0.8
2,876,834	+		ABIE40_RS14680	0.34	-0.3
2,876,834	+		ABIE40_RS14680	0.34	+0.7
2,876,834	+		ABIE40_RS14680	0.34	+0.8
2,876,834	+		ABIE40_RS14680	0.34	-1.1
2,876,834	+		ABIE40_RS14680	0.34	-0.9
2,876,835	-		ABIE40_RS14680	0.34	-0.0
2,876,835	-		ABIE40_RS14680	0.34	+1.5
2,876,835	-		ABIE40_RS14680	0.34	-0.3
2,876,835	-		ABIE40_RS14680	0.34	-1.6
2,876,835	-		ABIE40_RS14680	0.34	-2.1
2,876,866	+		ABIE40_RS14680	0.40	+0.5
2,876,866	+		ABIE40_RS14680	0.40	-0.3
2,876,866	+		ABIE40_RS14680	0.40	-0.1
2,876,866	+		ABIE40_RS14680	0.40	-0.7
2,876,867	-		ABIE40_RS14680	0.40	+0.2
2,876,867	-		ABIE40_RS14680	0.40	-0.5
2,876,867	-		ABIE40_RS14680	0.40	+1.9
2,876,917	+		ABIE40_RS14680	0.50	-0.5
2,876,918	-		ABIE40_RS14680	0.50	-0.6
2,876,918	-		ABIE40_RS14680	0.50	-0.1
2,876,932	+		ABIE40_RS14680	0.52	+0.3
2,876,932	+		ABIE40_RS14680	0.52	+0.5
2,876,953	-		ABIE40_RS14680	0.56	-0.5
2,876,953	-		ABIE40_RS14680	0.56	-0.3
2,876,953	-		ABIE40_RS14680	0.56	+0.4
2,877,018	+		ABIE40_RS14680	0.68	+1.6
2,877,060	+		ABIE40_RS14680	0.76	-0.9
2,877,060	+		ABIE40_RS14680	0.76	-0.2
2,877,140	-				+0.2
2,877,146	-				+1.0
2,877,256	+				+0.2
2,877,256	+				+0.5
2,877,256	+				-1.9
2,877,256	+				-0.9
2,877,256	+				+0.2
2,877,257	-				+0.2
2,877,257	-				-0.1
2,877,257	-				-0.2
2,877,257	-				-0.6
2,877,257	-				+0.8
2,877,267	+				+1.0
2,877,267	+				-0.5
2,877,268	-				-1.7
2,877,268	-				-0.2
2,877,441	-				-0.5
2,877,560	-		ABIE40_RS14685	0.18	-0.4
2,877,560	-		ABIE40_RS14685	0.18	-0.3
2,877,560	-		ABIE40_RS14685	0.18	+0.1
2,877,829	+		ABIE40_RS14685	0.45	-1.0
2,877,829	+		ABIE40_RS14685	0.45	+0.5
2,877,830	-		ABIE40_RS14685	0.45	+0.1
2,877,830	-		ABIE40_RS14685	0.45	+0.1
2,877,830	-		ABIE40_RS14685	0.45	+2.4
2,877,830	-		ABIE40_RS14685	0.45	-0.1
2,877,941	+		ABIE40_RS14685	0.57	-0.8
2,877,941	+		ABIE40_RS14685	0.57	-0.8
2,877,942	-		ABIE40_RS14685	0.57	-0.3
2,877,942	-		ABIE40_RS14685	0.57	+0.7
2,878,071	-		ABIE40_RS14685	0.70	-0.1
2,878,398	+				-0.3
2,878,399	-				+0.7
2,878,399	-				+0.0
2,878,514	+				+0.1
2,878,515	-				+0.6
2,878,515	-				+1.0
2,878,515	-				-2.2
2,878,535	+				-0.2
2,878,535	+				-0.2
2,878,536	-				-0.6
2,878,541	+				-0.7
2,878,541	+				+1.6
2,878,541	+				-2.0
2,878,542	-				+0.1
2,878,542	-				-0.6
2,878,542	-				-0.7
2,878,542	-				-0.3
2,878,542	-				+1.2
2,878,542	-				+0.6
2,878,571	+				-0.7
2,878,571	+				-0.2
2,878,571	+				+1.7
2,878,571	+				+0.0
2,878,571	+				-0.2
2,878,571	+				-0.9
2,878,571	+				+1.7
2,878,572	-				-0.9
2,878,572	-				-0.5
2,878,572	-				-1.3
2,878,572	-				+0.0
2,878,580	+				-0.6
2,878,581	-				-1.1
2,878,686	+		ABIE40_RS14690	0.15	-1.3
2,878,733	+		ABIE40_RS14690	0.20	-0.5
2,878,733	+		ABIE40_RS14690	0.20	-0.2
2,878,740	-		ABIE40_RS14690	0.20	+0.4
2,878,740	-		ABIE40_RS14690	0.20	-1.0
2,878,740	-		ABIE40_RS14690	0.20	-0.6
2,878,740	-		ABIE40_RS14690	0.20	-0.6
2,878,748	+		ABIE40_RS14690	0.21	-1.6
2,878,748	+		ABIE40_RS14690	0.21	-1.1
2,878,748	+		ABIE40_RS14690	0.21	-0.8
2,878,748	+		ABIE40_RS14690	0.21	-0.5
2,878,749	-		ABIE40_RS14690	0.21	+0.7
2,878,749	-		ABIE40_RS14690	0.21	-0.3
2,878,749	-		ABIE40_RS14690	0.21	+0.6
2,878,749	-		ABIE40_RS14690	0.21	+0.6
2,878,890	+		ABIE40_RS14690	0.34	-0.4
2,878,979	+		ABIE40_RS14690	0.41	-1.3
2,878,979	+		ABIE40_RS14690	0.41	+0.1
2,878,979	+		ABIE40_RS14690	0.41	-0.1
2,878,980	-		ABIE40_RS14690	0.42	+0.8
2,878,980	-		ABIE40_RS14690	0.42	-0.2
2,878,980	-		ABIE40_RS14690	0.42	-0.1
2,878,980	-		ABIE40_RS14690	0.42	+0.0
2,878,980	-		ABIE40_RS14690	0.42	+0.2
2,878,980	-		ABIE40_RS14690	0.42	-0.4
2,879,057	+		ABIE40_RS14690	0.48	-0.4
2,879,058	-		ABIE40_RS14690	0.48	+0.6
2,879,058	-		ABIE40_RS14690	0.48	-0.7
2,879,074	-		ABIE40_RS14690	0.50	+0.8
2,879,088	+		ABIE40_RS14690	0.51	+0.3
2,879,088	+		ABIE40_RS14690	0.51	+0.4
2,879,089	-		ABIE40_RS14690	0.51	-1.9
2,879,089	-		ABIE40_RS14690	0.51	-2.1
2,879,089	-		ABIE40_RS14690	0.51	-1.1
2,879,089	-		ABIE40_RS14690	0.51	-1.2
2,879,124	-		ABIE40_RS14690	0.54	-1.4
2,879,180	+		ABIE40_RS14690	0.59	-1.8
2,879,180	+		ABIE40_RS14690	0.59	-0.9
2,879,180	+		ABIE40_RS14690	0.59	+0.2
2,879,180	+		ABIE40_RS14690	0.59	-1.8
2,879,180	+		ABIE40_RS14690	0.59	-2.8
2,879,180	+		ABIE40_RS14690	0.59	-0.2
2,879,180	+		ABIE40_RS14690	0.59	-0.3
2,879,180	+		ABIE40_RS14690	0.59	-0.4
2,879,181	-		ABIE40_RS14690	0.59	-0.7
2,879,181	-		ABIE40_RS14690	0.59	-0.2
2,879,181	-		ABIE40_RS14690	0.59	-0.2
2,879,181	-		ABIE40_RS14690	0.59	-3.2
2,879,224	-		ABIE40_RS14690	0.63	-0.0
2,879,306	+		ABIE40_RS14690	0.70	+0.1
2,879,306	+		ABIE40_RS14690	0.70	-2.2
2,879,307	-		ABIE40_RS14690	0.71	-0.0
2,879,307	-		ABIE40_RS14690	0.71	+0.7