Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS11380

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
2,208,590	+		ABIE40_RS11375	0.30	-0.5
2,208,590	+		ABIE40_RS11375	0.30	+0.3
2,208,590	+		ABIE40_RS11375	0.30	+0.9
2,208,590	+		ABIE40_RS11375	0.30	+0.4
2,208,590	+		ABIE40_RS11375	0.30	+0.4
2,208,590	+		ABIE40_RS11375	0.30	+0.1
2,208,590	+		ABIE40_RS11375	0.30	+1.7
2,208,590	+		ABIE40_RS11375	0.30	+0.4
2,208,591	-		ABIE40_RS11375	0.30	-1.1
2,208,591	-		ABIE40_RS11375	0.30	+0.4
2,208,591	-		ABIE40_RS11375	0.30	-0.4
2,208,591	-		ABIE40_RS11375	0.30	+0.3
2,208,591	-		ABIE40_RS11375	0.30	-0.9
2,208,591	-		ABIE40_RS11375	0.30	-0.5
2,208,591	-		ABIE40_RS11375	0.30	-0.1
2,208,591	-		ABIE40_RS11375	0.30	-1.6
2,208,591	-		ABIE40_RS11375	0.30	-1.1
2,208,592	+		ABIE40_RS11375	0.31	+0.1
2,208,592	+		ABIE40_RS11375	0.31	-0.5
2,208,592	+		ABIE40_RS11375	0.31	-0.7
2,208,592	+		ABIE40_RS11375	0.31	-0.0
2,208,592	+		ABIE40_RS11375	0.31	-0.3
2,208,592	+		ABIE40_RS11375	0.31	+1.1
2,208,592	+		ABIE40_RS11375	0.31	+0.8
2,208,592	+		ABIE40_RS11375	0.31	+0.1
2,208,593	-		ABIE40_RS11375	0.31	-2.1
2,208,593	-		ABIE40_RS11375	0.31	-3.0
2,208,593	-		ABIE40_RS11375	0.31	+2.4
2,208,593	-		ABIE40_RS11375	0.31	+1.2
2,208,614	+		ABIE40_RS11375	0.33	+0.4
2,208,614	+		ABIE40_RS11375	0.33	+0.4
2,208,614	+		ABIE40_RS11375	0.33	+0.1
2,208,614	+		ABIE40_RS11375	0.33	+0.0
2,208,615	-		ABIE40_RS11375	0.33	+2.5
2,208,615	-		ABIE40_RS11375	0.33	+0.7
2,208,615	-		ABIE40_RS11375	0.33	+0.4
2,208,659	+		ABIE40_RS11375	0.37	+0.3
2,208,689	+		ABIE40_RS11375	0.40	+0.2
2,208,689	+		ABIE40_RS11375	0.40	+0.2
2,208,689	+		ABIE40_RS11375	0.40	-0.6
2,208,689	+		ABIE40_RS11375	0.40	+0.8
2,208,690	-		ABIE40_RS11375	0.40	+0.3
2,208,690	-		ABIE40_RS11375	0.40	-0.5
2,208,690	-		ABIE40_RS11375	0.40	-1.2
2,208,835	+		ABIE40_RS11375	0.54	+2.8
2,208,835	+		ABIE40_RS11375	0.54	-0.1
2,208,835	+		ABIE40_RS11375	0.54	+1.9
2,208,836	-		ABIE40_RS11375	0.54	+0.4
2,208,935	+		ABIE40_RS11375	0.63	+0.0
2,208,935	+		ABIE40_RS11375	0.63	-0.1
2,208,936	-		ABIE40_RS11375	0.63	+3.6
2,208,936	-		ABIE40_RS11375	0.63	+0.2
2,208,936	-		ABIE40_RS11375	0.63	-2.1
2,208,936	-		ABIE40_RS11375	0.63	+0.5
2,208,936	-		ABIE40_RS11375	0.63	-0.2
2,208,938	+		ABIE40_RS11375	0.64	+0.4
2,208,938	+		ABIE40_RS11375	0.64	-0.6
2,208,939	-		ABIE40_RS11375	0.64	-0.3
2,208,939	-		ABIE40_RS11375	0.64	-0.4
2,209,031	+		ABIE40_RS11375	0.72	-0.5
2,209,250	+				-0.6
2,209,250	+				-0.3
2,209,328	+				-0.3
2,209,328	+				+0.1
2,209,328	+				-1.2
2,209,329	-				+1.2
2,209,407	+				+0.2
2,209,408	-				-1.0
2,209,508	+				-1.5
2,209,508	+				-0.8
2,209,508	+				+0.7
2,209,508	+				+0.3
2,209,508	+				+0.8
2,209,509	-				-0.5
2,209,509	-				-1.4
2,209,509	-				-1.1
2,209,564	-				-0.1
2,209,626	+				-0.9
2,209,627	-				+0.4
2,209,627	-				+0.2
2,209,627	-				+1.2
2,209,683	+				+0.8
2,209,683	+				+0.5
2,209,683	+				+0.8
2,209,683	+				+1.0
2,209,684	-				+0.5
2,209,684	-				-0.3
2,209,857	+		ABIE40_RS11380	0.23	+0.1
2,209,857	+		ABIE40_RS11380	0.23	+1.2
2,209,857	+		ABIE40_RS11380	0.23	+0.6
2,209,857	+		ABIE40_RS11380	0.23	+0.6
2,209,857	+		ABIE40_RS11380	0.23	-0.9
2,209,857	+		ABIE40_RS11380	0.23	-0.0
2,209,857	+		ABIE40_RS11380	0.23	-0.9
2,209,858	-		ABIE40_RS11380	0.23	+0.5
2,209,858	-		ABIE40_RS11380	0.23	-0.5
2,209,858	-		ABIE40_RS11380	0.23	-1.8
2,209,858	-		ABIE40_RS11380	0.23	-1.2
2,209,858	-		ABIE40_RS11380	0.23	-0.3
2,209,858	-		ABIE40_RS11380	0.23	-0.2
2,210,178	+		ABIE40_RS11380	0.49	+0.3
2,210,178	+		ABIE40_RS11380	0.49	+0.9
2,210,178	+		ABIE40_RS11380	0.49	-0.1
2,210,178	+		ABIE40_RS11380	0.49	-0.5
2,210,179	-		ABIE40_RS11380	0.49	-1.8
2,210,179	-		ABIE40_RS11380	0.49	-0.3
2,210,254	+		ABIE40_RS11380	0.55	-0.1
2,210,261	-		ABIE40_RS11380	0.55	+0.0
2,210,531	-		ABIE40_RS11380	0.77	-0.6
2,210,531	-		ABIE40_RS11380	0.77	+0.9
2,210,536	-		ABIE40_RS11380	0.77	-0.3
2,210,536	-		ABIE40_RS11380	0.77	-2.0
2,210,536	-		ABIE40_RS11380	0.77	-0.3
2,210,536	-		ABIE40_RS11380	0.77	+1.0
2,210,634	+		ABIE40_RS11380	0.85	+0.8
2,210,635	-		ABIE40_RS11380	0.85	+0.2
2,210,840	+				+0.0
2,210,841	-				-0.1
2,210,841	-				-2.2
2,210,860	+				+0.7
2,210,860	+				-0.3
2,210,885	+				-0.1
2,210,886	-				+0.9
2,210,903	+				+0.4
2,210,918	+				-1.0
2,210,919	-				-1.8
2,210,927	+				-1.9
2,210,928	-				+0.3
2,211,020	+		ABIE40_RS11385	0.22	-0.6
2,211,020	+		ABIE40_RS11385	0.22	-2.4
2,211,021	-		ABIE40_RS11385	0.22	-1.7
2,211,032	+		ABIE40_RS11385	0.25	-0.3
2,211,032	+		ABIE40_RS11385	0.25	+0.2
2,211,032	+		ABIE40_RS11385	0.25	+0.7
2,211,032	+		ABIE40_RS11385	0.25	-0.2
2,211,066	+		ABIE40_RS11385	0.32	+0.2
2,211,066	+		ABIE40_RS11385	0.32	-0.5
2,211,066	+		ABIE40_RS11385	0.32	-0.2
2,211,066	+		ABIE40_RS11385	0.32	-1.6
2,211,066	+		ABIE40_RS11385	0.32	+0.1
2,211,066	+		ABIE40_RS11385	0.32	-0.6
2,211,067	-		ABIE40_RS11385	0.32	+0.4
2,211,067	-		ABIE40_RS11385	0.32	-0.1
2,211,067	-		ABIE40_RS11385	0.32	+0.7
2,211,067	-		ABIE40_RS11385	0.32	-1.3
2,211,067	-		ABIE40_RS11385	0.32	+0.7
2,211,068	+		ABIE40_RS11385	0.32	-0.8
2,211,068	+		ABIE40_RS11385	0.32	-0.3
2,211,069	-		ABIE40_RS11385	0.33	-1.5
2,211,069	-		ABIE40_RS11385	0.33	+0.2
2,211,079	-		ABIE40_RS11385	0.35	-1.5
2,211,228	+		ABIE40_RS11385	0.67	-0.5
2,211,228	+		ABIE40_RS11385	0.67	-2.8
2,211,229	-		ABIE40_RS11385	0.67	+0.1
2,211,229	-		ABIE40_RS11385	0.67	-0.2
2,211,242	+		ABIE40_RS11385	0.70	-0.3
2,211,243	-		ABIE40_RS11385	0.70	-0.4
2,211,516	+				-1.2
2,211,516	+				+0.9
2,211,516	+				-0.4
2,211,516	+				+0.4
2,211,516	+				+0.4
2,211,516	+				+0.3
2,211,516	+				+0.0
2,211,517	-				-0.3
2,211,517	-				-0.4
2,211,517	-				+0.7
2,211,517	-				+0.7
2,211,517	-				-0.4
2,211,517	-				+0.9
2,211,517	-				-0.3
2,211,517	-				-0.3
2,211,517	-				+0.2
2,211,517	-				-0.3
2,211,589	+				+0.4
2,211,589	+				+2.2
2,211,589	+				-0.6
2,211,590	-				+0.1