Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS27415 and ABID97_RS27420 are separated by 44 nucleotides ABID97_RS27420 and ABID97_RS27425 are separated by 14 nucleotides ABID97_RS27425 and ABID97_RS27430 are separated by 112 nucleotides
ABID97_RS27415: ABID97_RS27415 - amino acid ABC transporter ATP-binding protein, at 399,399 to 400,133
_RS27415
ABID97_RS27420: ABID97_RS27420 - ABC transporter substrate-binding protein, at 400,178 to 401,017
_RS27420
ABID97_RS27425: ABID97_RS27425 - tannase/feruloyl esterase family alpha/beta hydrolase, at 401,032 to 402,741
_RS27425
ABID97_RS27430: ABID97_RS27430 - acetate--CoA ligase, at 402,854 to 404,776
_RS27430
Position (kb) 401
402
403 Strain fitness (log2 ratio) -2
-1
0
1
2 at 400.532 kb on + strand, within ABID97_RS27420 at 400.533 kb on - strand, within ABID97_RS27420 at 400.533 kb on - strand, within ABID97_RS27420 at 400.533 kb on - strand, within ABID97_RS27420 at 401.011 kb on - strand at 401.084 kb on + strand at 401.461 kb on - strand, within ABID97_RS27425 at 401.577 kb on - strand, within ABID97_RS27425 at 401.747 kb on + strand, within ABID97_RS27425 at 401.748 kb on - strand, within ABID97_RS27425 at 401.867 kb on + strand, within ABID97_RS27425 at 401.867 kb on + strand, within ABID97_RS27425 at 401.868 kb on - strand, within ABID97_RS27425 at 401.868 kb on - strand, within ABID97_RS27425 at 401.868 kb on - strand, within ABID97_RS27425 at 402.114 kb on - strand, within ABID97_RS27425 at 402.116 kb on + strand, within ABID97_RS27425 at 402.116 kb on + strand, within ABID97_RS27425 at 402.116 kb on + strand, within ABID97_RS27425 at 402.141 kb on - strand, within ABID97_RS27425 at 402.143 kb on + strand, within ABID97_RS27425 at 402.296 kb on + strand, within ABID97_RS27425 at 403.276 kb on - strand, within ABID97_RS27430 at 403.317 kb on + strand, within ABID97_RS27430 at 403.318 kb on - strand, within ABID97_RS27430 at 403.318 kb on - strand, within ABID97_RS27430 at 403.318 kb on - strand, within ABID97_RS27430 at 403.318 kb on - strand, within ABID97_RS27430 at 403.345 kb on - strand, within ABID97_RS27430 at 403.345 kb on - strand, within ABID97_RS27430
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 400,532 + ABID97_RS27420 0.42 +1.4 400,533 - ABID97_RS27420 0.42 +0.1 400,533 - ABID97_RS27420 0.42 -0.1 400,533 - ABID97_RS27420 0.42 -0.4 401,011 - +0.3 401,084 + +0.3 401,461 - ABID97_RS27425 0.25 +0.2 401,577 - ABID97_RS27425 0.32 +1.7 401,747 + ABID97_RS27425 0.42 +0.3 401,748 - ABID97_RS27425 0.42 +0.1 401,867 + ABID97_RS27425 0.49 +0.2 401,867 + ABID97_RS27425 0.49 +0.2 401,868 - ABID97_RS27425 0.49 +0.5 401,868 - ABID97_RS27425 0.49 +0.1 401,868 - ABID97_RS27425 0.49 +0.7 402,114 - ABID97_RS27425 0.63 +0.2 402,116 + ABID97_RS27425 0.63 +0.7 402,116 + ABID97_RS27425 0.63 -0.0 402,116 + ABID97_RS27425 0.63 +0.5 402,141 - ABID97_RS27425 0.65 +1.0 402,143 + ABID97_RS27425 0.65 +0.3 402,296 + ABID97_RS27425 0.74 -1.0 403,276 - ABID97_RS27430 0.22 +2.3 403,317 + ABID97_RS27430 0.24 +0.0 403,318 - ABID97_RS27430 0.24 +0.3 403,318 - ABID97_RS27430 0.24 +0.1 403,318 - ABID97_RS27430 0.24 -0.1 403,318 - ABID97_RS27430 0.24 -1.3 403,345 - ABID97_RS27430 0.26 -2.0 403,345 - ABID97_RS27430 0.26 -0.4
Or see this region's nucleotide sequence