Strain Fitness in Variovorax sp. OAS795 around ABID97_RS05700

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
1,199,852	+				-0.5
1,199,852	+				+0.8
1,199,852	+				-0.2
1,199,853	-				+0.9
1,199,922	+				+1.9
1,199,922	+				+0.0
1,199,922	+				+0.5
1,199,922	+				-0.9
1,199,922	+				-0.5
1,199,922	+				-0.5
1,199,923	-				-0.4
1,199,923	-				-0.4
1,199,923	-				+0.0
1,199,923	-				+0.4
1,199,923	-				-0.1
1,199,923	-				-0.3
1,199,923	-				+0.0
1,199,923	-				-0.2
1,199,923	-				-0.0
1,199,923	-				-1.6
1,199,923	-				-0.1
1,199,928	+				-0.0
1,199,928	+				-0.4
1,199,928	+				-0.4
1,199,928	+				-0.3
1,199,929	-				-0.3
1,199,930	+				-0.2
1,199,930	+				-0.3
1,199,930	+				-1.1
1,199,931	-				-0.0
1,199,931	-				-0.2
1,199,931	-				+0.2
1,199,931	-				+0.1
1,199,990	-				-1.1
1,199,990	-				+0.0
1,200,075	+		ABID97_RS05695	0.20	-0.5
1,200,108	+		ABID97_RS05695	0.24	-0.0
1,200,109	-		ABID97_RS05695	0.25	-0.2
1,200,109	-		ABID97_RS05695	0.25	-0.0
1,200,154	+		ABID97_RS05695	0.31	-0.2
1,200,154	+		ABID97_RS05695	0.31	+1.0
1,200,154	+		ABID97_RS05695	0.31	+0.7
1,200,154	+		ABID97_RS05695	0.31	-0.5
1,200,154	+		ABID97_RS05695	0.31	+0.0
1,200,154	+		ABID97_RS05695	0.31	-0.2
1,200,154	+		ABID97_RS05695	0.31	-0.8
1,200,154	+		ABID97_RS05695	0.31	+0.4
1,200,154	+		ABID97_RS05695	0.31	+0.7
1,200,154	+		ABID97_RS05695	0.31	-0.5
1,200,155	-		ABID97_RS05695	0.31	+0.3
1,200,155	-		ABID97_RS05695	0.31	+0.1
1,200,155	-		ABID97_RS05695	0.31	-0.8
1,200,313	+		ABID97_RS05695	0.52	-0.2
1,200,313	+		ABID97_RS05695	0.52	-0.3
1,200,313	+		ABID97_RS05695	0.52	-0.7
1,200,313	+		ABID97_RS05695	0.52	+0.0
1,200,313	+		ABID97_RS05695	0.52	-1.0
1,200,314	-		ABID97_RS05695	0.52	-0.3
1,200,314	-		ABID97_RS05695	0.52	-0.3
1,200,314	-		ABID97_RS05695	0.52	-0.1
1,200,314	-		ABID97_RS05695	0.52	-1.1
1,200,314	-		ABID97_RS05695	0.52	+0.9
1,200,314	-		ABID97_RS05695	0.52	-0.4
1,200,314	-		ABID97_RS05695	0.52	-0.2
1,200,314	-		ABID97_RS05695	0.52	-0.2
1,200,314	-		ABID97_RS05695	0.52	+0.1
1,200,314	-		ABID97_RS05695	0.52	-0.6
1,200,314	-		ABID97_RS05695	0.52	-0.7
1,200,314	-		ABID97_RS05695	0.52	-0.4
1,200,314	-		ABID97_RS05695	0.52	+0.1
1,200,314	-		ABID97_RS05695	0.52	+0.2
1,200,541	+		ABID97_RS05695	0.82	-0.0
1,200,542	-		ABID97_RS05695	0.82	+0.1
1,200,542	-		ABID97_RS05695	0.82	+0.2
1,200,542	-		ABID97_RS05695	0.82	-0.3
1,200,542	-		ABID97_RS05695	0.82	-0.3
1,200,542	-		ABID97_RS05695	0.82	-0.3
1,200,542	-		ABID97_RS05695	0.82	+0.4
1,200,592	+		ABID97_RS05695	0.88	+1.1
1,200,592	+		ABID97_RS05695	0.88	-0.3
1,200,592	+		ABID97_RS05695	0.88	+0.1
1,200,593	-		ABID97_RS05695	0.89	-0.2
1,200,598	+		ABID97_RS05695	0.89	-0.5
1,200,692	+				-0.6
1,200,692	+				-0.2
1,200,693	-				+0.4
1,200,757	+				-1.5
1,200,758	-				-1.9
1,200,784	+		ABID97_RS05700	0.11	-1.4
1,200,785	-		ABID97_RS05700	0.11	-0.2
1,200,785	-		ABID97_RS05700	0.11	-1.2
1,200,785	-		ABID97_RS05700	0.11	-2.1
1,200,873	+		ABID97_RS05700	0.21	-1.9
1,200,873	+		ABID97_RS05700	0.21	-1.4
1,200,873	+		ABID97_RS05700	0.21	-1.7
1,200,873	+		ABID97_RS05700	0.21	-2.4
1,200,874	-		ABID97_RS05700	0.21	-0.7
1,200,874	-		ABID97_RS05700	0.21	-1.1
1,200,874	-		ABID97_RS05700	0.21	-1.5
1,200,874	-		ABID97_RS05700	0.21	-2.2
1,200,874	-		ABID97_RS05700	0.21	+0.0
1,200,874	-		ABID97_RS05700	0.21	-2.4
1,200,874	-		ABID97_RS05700	0.21	-0.4
1,200,904	+		ABID97_RS05700	0.24	-1.2
1,200,904	+		ABID97_RS05700	0.24	-1.3
1,200,904	+		ABID97_RS05700	0.24	-1.3
1,200,905	-		ABID97_RS05700	0.24	-0.3
1,200,944	+		ABID97_RS05700	0.29	-2.3
1,200,944	+		ABID97_RS05700	0.29	+1.6
1,200,945	-		ABID97_RS05700	0.29	-0.3
1,200,983	+		ABID97_RS05700	0.33	-0.7
1,200,983	+		ABID97_RS05700	0.33	-2.6
1,200,983	+		ABID97_RS05700	0.33	-1.0
1,200,983	+		ABID97_RS05700	0.33	-0.6
1,200,983	+		ABID97_RS05700	0.33	-1.0
1,200,984	-		ABID97_RS05700	0.33	-0.7
1,200,984	-		ABID97_RS05700	0.33	-2.5
1,200,984	-		ABID97_RS05700	0.33	-2.6
1,201,121	+		ABID97_RS05700	0.49	-2.4
1,201,121	+		ABID97_RS05700	0.49	-2.5
1,201,122	-		ABID97_RS05700	0.49	-0.7
1,201,179	-		ABID97_RS05700	0.55	-1.5
1,201,179	-		ABID97_RS05700	0.55	-0.4
1,201,179	-		ABID97_RS05700	0.55	-4.4
1,201,179	-		ABID97_RS05700	0.55	+0.0
1,201,179	-		ABID97_RS05700	0.55	-2.5
1,201,179	-		ABID97_RS05700	0.55	-1.9
1,201,179	-		ABID97_RS05700	0.55	-4.0
1,201,205	+		ABID97_RS05700	0.58	-1.4
1,201,205	+		ABID97_RS05700	0.58	-1.3
1,201,206	-		ABID97_RS05700	0.58	-3.0
1,201,265	+		ABID97_RS05700	0.65	-2.8
1,201,265	+		ABID97_RS05700	0.65	-0.5
1,201,265	+		ABID97_RS05700	0.65	+0.6
1,201,266	-		ABID97_RS05700	0.65	-0.8
1,201,266	-		ABID97_RS05700	0.65	+0.2
1,201,266	-		ABID97_RS05700	0.65	-2.6
1,201,266	-		ABID97_RS05700	0.65	-0.5
1,201,266	-		ABID97_RS05700	0.65	-1.1
1,201,266	-		ABID97_RS05700	0.65	-2.0
1,201,266	-		ABID97_RS05700	0.65	-0.4
1,201,266	-		ABID97_RS05700	0.65	-2.1
1,201,364	+		ABID97_RS05700	0.76	-1.8
1,201,364	+		ABID97_RS05700	0.76	+0.2
1,201,364	+		ABID97_RS05700	0.76	-1.6
1,201,365	-		ABID97_RS05700	0.76	+0.5
1,201,365	-		ABID97_RS05700	0.76	-2.0
1,201,517	+				-0.9
1,201,517	+				-0.5
1,201,517	+				-1.8
1,201,872	+		ABID97_RS05705	0.29	-1.6
1,201,872	+		ABID97_RS05705	0.29	-0.7
1,201,872	+		ABID97_RS05705	0.29	+0.7
1,201,872	+		ABID97_RS05705	0.29	-1.0
1,201,872	+		ABID97_RS05705	0.29	+0.4
1,201,873	-		ABID97_RS05705	0.29	+0.6
1,201,873	-		ABID97_RS05705	0.29	-0.7
1,201,873	-		ABID97_RS05705	0.29	-0.3
1,201,873	-		ABID97_RS05705	0.29	-1.9
1,201,873	-		ABID97_RS05705	0.29	-1.0
1,201,876	+		ABID97_RS05705	0.30	-1.2
1,201,876	+		ABID97_RS05705	0.30	-1.3
1,201,876	+		ABID97_RS05705	0.30	-1.5
1,201,876	+		ABID97_RS05705	0.30	-3.0
1,201,876	+		ABID97_RS05705	0.30	-1.7
1,201,876	+		ABID97_RS05705	0.30	-1.6
1,201,876	+		ABID97_RS05705	0.30	-1.6
1,201,876	+		ABID97_RS05705	0.30	-1.5
1,201,876	+		ABID97_RS05705	0.30	-2.0
1,201,876	+		ABID97_RS05705	0.30	-1.6
1,201,877	-		ABID97_RS05705	0.30	-2.3
1,201,877	-		ABID97_RS05705	0.30	-1.1
1,201,877	-		ABID97_RS05705	0.30	-0.9
1,201,877	-		ABID97_RS05705	0.30	-1.4
1,201,877	-		ABID97_RS05705	0.30	-1.5
1,201,877	-		ABID97_RS05705	0.30	-0.8
1,201,877	-		ABID97_RS05705	0.30	-1.1
1,201,877	-		ABID97_RS05705	0.30	-1.4
1,201,877	-		ABID97_RS05705	0.30	-0.8
1,201,877	-		ABID97_RS05705	0.30	-0.7
1,201,877	-		ABID97_RS05705	0.30	-0.1
1,201,877	-		ABID97_RS05705	0.30	-2.2
1,201,877	-		ABID97_RS05705	0.30	-1.1
1,201,924	+		ABID97_RS05705	0.34	-1.4
1,201,924	+		ABID97_RS05705	0.34	-2.5
1,201,924	+		ABID97_RS05705	0.34	-1.0
1,201,924	+		ABID97_RS05705	0.34	+0.2
1,201,924	+		ABID97_RS05705	0.34	-2.1
1,201,925	-		ABID97_RS05705	0.34	+0.5
1,201,925	-		ABID97_RS05705	0.34	-0.5
1,201,925	-		ABID97_RS05705	0.34	-0.6
1,201,925	-		ABID97_RS05705	0.34	-0.8
1,202,098	+		ABID97_RS05705	0.51	-0.7
1,202,098	+		ABID97_RS05705	0.51	-1.4
1,202,099	-		ABID97_RS05705	0.51	-1.3
1,202,099	-		ABID97_RS05705	0.51	-1.6
1,202,111	-		ABID97_RS05705	0.52	-1.4
1,202,134	+		ABID97_RS05705	0.54	-1.0
1,202,134	+		ABID97_RS05705	0.54	-1.2
1,202,134	+		ABID97_RS05705	0.54	-1.5
1,202,134	+		ABID97_RS05705	0.54	-2.0
1,202,134	+		ABID97_RS05705	0.54	-1.7
1,202,134	+		ABID97_RS05705	0.54	-0.7
1,202,134	+		ABID97_RS05705	0.54	-0.9
1,202,167	+		ABID97_RS05705	0.58	-0.2
1,202,236	+		ABID97_RS05705	0.64	+0.6
1,202,237	-		ABID97_RS05705	0.64	-1.0
1,202,237	-		ABID97_RS05705	0.64	-1.2
1,202,237	-		ABID97_RS05705	0.64	-1.4
1,202,365	+		ABID97_RS05705	0.77	-0.7
1,202,366	-		ABID97_RS05705	0.77	-0.6
1,202,366	-		ABID97_RS05705	0.77	-0.6
1,202,428	+		ABID97_RS05705	0.83	-0.0
1,202,428	+		ABID97_RS05705	0.83	-1.3
1,202,429	-		ABID97_RS05705	0.83	-2.2
1,202,510	-				-2.4
1,202,510	-				-0.9
1,202,527	+				-2.0
1,202,528	-				-1.3
1,202,528	-				-1.0
1,202,557	+				-1.9
1,202,557	+				-0.2
1,202,557	+				-1.7
1,202,557	+				-0.4
1,202,557	+				-0.3
1,202,557	+				-1.2
1,202,558	-				+1.0