Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS04485 and ABID97_RS04490 are separated by 318 nucleotides ABID97_RS04490 and ABID97_RS04495 are separated by 183 nucleotides ABID97_RS04495 and ABID97_RS04500 are separated by 80 nucleotides
ABID97_RS04485: ABID97_RS04485 - ATP-dependent helicase, at 929,345 to 931,462
_RS04485
ABID97_RS04490: ABID97_RS04490 - ribosome-associated translation inhibitor RaiA, at 931,781 to 932,110
_RS04490
ABID97_RS04495: ABID97_RS04495 - PTS sugar transporter subunit IIA, at 932,294 to 932,761
_RS04495
ABID97_RS04500: ABID97_RS04500 - HPr(Ser) kinase/phosphatase, at 932,842 to 933,801
_RS04500
Position (kb) 931
932
933 Strain fitness (log2 ratio) -2
-1
0
1 at 930.837 kb on - strand, within ABID97_RS04485 at 930.899 kb on + strand, within ABID97_RS04485 at 930.900 kb on - strand, within ABID97_RS04485 at 930.923 kb on + strand, within ABID97_RS04485 at 930.924 kb on - strand, within ABID97_RS04485 at 931.080 kb on - strand, within ABID97_RS04485 at 931.080 kb on - strand, within ABID97_RS04485 at 931.080 kb on - strand, within ABID97_RS04485 at 931.217 kb on + strand, within ABID97_RS04485 at 931.217 kb on + strand, within ABID97_RS04485 at 931.217 kb on + strand, within ABID97_RS04485 at 931.217 kb on + strand, within ABID97_RS04485 at 931.218 kb on - strand, within ABID97_RS04485 at 931.218 kb on - strand, within ABID97_RS04485 at 931.274 kb on + strand at 931.274 kb on + strand at 931.274 kb on + strand at 931.274 kb on + strand at 931.274 kb on + strand at 931.275 kb on - strand at 931.275 kb on - strand at 931.275 kb on - strand at 931.313 kb on + strand at 931.314 kb on - strand at 931.563 kb on + strand at 931.563 kb on + strand at 931.564 kb on - strand at 931.564 kb on - strand at 931.575 kb on - strand at 931.653 kb on + strand at 931.653 kb on + strand at 931.653 kb on + strand at 931.654 kb on - strand at 931.835 kb on + strand, within ABID97_RS04490 at 931.836 kb on - strand, within ABID97_RS04490 at 931.836 kb on - strand, within ABID97_RS04490 at 932.006 kb on + strand, within ABID97_RS04490 at 932.006 kb on + strand, within ABID97_RS04490 at 932.006 kb on + strand, within ABID97_RS04490 at 932.006 kb on + strand, within ABID97_RS04490 at 932.006 kb on + strand, within ABID97_RS04490 at 932.007 kb on - strand, within ABID97_RS04490 at 932.007 kb on - strand, within ABID97_RS04490 at 932.108 kb on + strand at 932.108 kb on + strand at 932.109 kb on - strand at 932.109 kb on - strand at 932.109 kb on - strand at 932.109 kb on - strand at 932.109 kb on - strand at 932.109 kb on - strand at 932.109 kb on - strand at 932.233 kb on + strand at 932.270 kb on + strand at 932.270 kb on + strand at 932.270 kb on + strand at 932.271 kb on - strand at 932.837 kb on + strand at 932.838 kb on - strand at 933.001 kb on + strand, within ABID97_RS04500 at 933.001 kb on + strand, within ABID97_RS04500 at 933.002 kb on - strand, within ABID97_RS04500 at 933.002 kb on - strand, within ABID97_RS04500 at 933.049 kb on + strand, within ABID97_RS04500
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 930,837 - ABID97_RS04485 0.70 -0.3 930,899 + ABID97_RS04485 0.73 -0.6 930,900 - ABID97_RS04485 0.73 +0.3 930,923 + ABID97_RS04485 0.75 +0.3 930,924 - ABID97_RS04485 0.75 -0.3 931,080 - ABID97_RS04485 0.82 -0.1 931,080 - ABID97_RS04485 0.82 +0.4 931,080 - ABID97_RS04485 0.82 +0.7 931,217 + ABID97_RS04485 0.88 +1.6 931,217 + ABID97_RS04485 0.88 +0.0 931,217 + ABID97_RS04485 0.88 +0.5 931,217 + ABID97_RS04485 0.88 +0.9 931,218 - ABID97_RS04485 0.88 -0.8 931,218 - ABID97_RS04485 0.88 +0.1 931,274 + +0.2 931,274 + -0.6 931,274 + +1.0 931,274 + +0.7 931,274 + -1.2 931,275 - -0.7 931,275 - -0.6 931,275 - -0.0 931,313 + -1.3 931,314 - +0.4 931,563 + -0.2 931,563 + -1.1 931,564 - -0.4 931,564 - +0.3 931,575 - -0.2 931,653 + -0.8 931,653 + -0.1 931,653 + +1.4 931,654 - +0.1 931,835 + ABID97_RS04490 0.16 -0.2 931,836 - ABID97_RS04490 0.17 +0.3 931,836 - ABID97_RS04490 0.17 +0.6 932,006 + ABID97_RS04490 0.68 -0.1 932,006 + ABID97_RS04490 0.68 -0.6 932,006 + ABID97_RS04490 0.68 -0.1 932,006 + ABID97_RS04490 0.68 -0.4 932,006 + ABID97_RS04490 0.68 +0.1 932,007 - ABID97_RS04490 0.68 -0.5 932,007 - ABID97_RS04490 0.68 -1.0 932,108 + -0.2 932,108 + -0.5 932,109 - -0.3 932,109 - -0.4 932,109 - -0.6 932,109 - -0.5 932,109 - -0.3 932,109 - +0.9 932,109 - -1.0 932,233 + +1.6 932,270 + -1.3 932,270 + -0.1 932,270 + -0.0 932,271 - -1.4 932,837 + +1.0 932,838 - -2.4 933,001 + ABID97_RS04500 0.17 -0.4 933,001 + ABID97_RS04500 0.17 -0.0 933,002 - ABID97_RS04500 0.17 -0.4 933,002 - ABID97_RS04500 0.17 -0.4 933,049 + ABID97_RS04500 0.22 -2.5
Or see this region's nucleotide sequence