Strain Fitness in Pseudomonas sp. RS175 around PFR28_04430

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
5,042,777	+		PFR28_04429	0.45	+1.2
5,042,816	+		PFR28_04429	0.48	+0.6
5,042,816	+		PFR28_04429	0.48	-0.1
5,042,817	-		PFR28_04429	0.48	+1.9
5,042,817	-		PFR28_04429	0.48	+0.4
5,042,822	+		PFR28_04429	0.48	+0.1
5,042,823	-		PFR28_04429	0.48	+1.1
5,042,975	+		PFR28_04429	0.57	+0.2
5,043,038	+		PFR28_04429	0.60	-0.9
5,043,062	+		PFR28_04429	0.62	+0.3
5,043,062	+		PFR28_04429	0.62	+0.9
5,043,062	+		PFR28_04429	0.62	-0.3
5,043,063	-		PFR28_04429	0.62	+0.2
5,043,063	-		PFR28_04429	0.62	+0.3
5,043,063	-		PFR28_04429	0.62	-1.4
5,043,063	-		PFR28_04429	0.62	+0.8
5,043,063	-		PFR28_04429	0.62	-0.9
5,043,063	-		PFR28_04429	0.62	-0.7
5,043,063	-		PFR28_04429	0.62	-0.0
5,043,236	+		PFR28_04429	0.72	+0.1
5,043,236	+		PFR28_04429	0.72	+2.5
5,043,236	+		PFR28_04429	0.72	+0.0
5,043,236	+		PFR28_04429	0.72	-2.1
5,043,236	+		PFR28_04429	0.72	-2.5
5,043,236	+		PFR28_04429	0.72	+0.6
5,043,236	+		PFR28_04429	0.72	+0.3
5,043,237	-		PFR28_04429	0.72	+0.2
5,043,237	-		PFR28_04429	0.72	+0.5
5,043,237	-		PFR28_04429	0.72	-3.1
5,043,237	-		PFR28_04429	0.72	+0.3
5,043,238	+		PFR28_04429	0.72	-0.8
5,043,238	+		PFR28_04429	0.72	-0.7
5,043,238	+		PFR28_04429	0.72	+1.6
5,043,238	+		PFR28_04429	0.72	+0.8
5,043,238	+		PFR28_04429	0.72	+1.4
5,043,238	+		PFR28_04429	0.72	-1.5
5,043,238	+		PFR28_04429	0.72	-1.8
5,043,238	+		PFR28_04429	0.72	-0.4
5,043,238	+		PFR28_04429	0.72	-1.7
5,043,239	-		PFR28_04429	0.72	-0.3
5,043,239	-		PFR28_04429	0.72	-1.1
5,043,239	-		PFR28_04429	0.72	-2.8
5,043,239	-		PFR28_04429	0.72	+0.8
5,043,239	-		PFR28_04429	0.72	+0.6
5,043,239	-		PFR28_04429	0.72	-1.9
5,043,239	-		PFR28_04429	0.72	+0.9
5,043,405	+		PFR28_04429	0.81	-1.9
5,043,641	+				+0.5
5,043,792	+				-2.3
5,043,792	+				+1.2
5,043,792	+				+0.8
5,043,916	-		PFR28_04430	0.18	-0.0
5,043,916	-		PFR28_04430	0.18	+1.5
5,043,975	+		PFR28_04430	0.25	-0.9
5,043,975	+		PFR28_04430	0.25	+1.7
5,043,975	+		PFR28_04430	0.25	+0.0
5,043,975	+		PFR28_04430	0.25	-0.1
5,043,976	-		PFR28_04430	0.25	+0.4
5,043,976	-		PFR28_04430	0.25	-0.8
5,043,976	-		PFR28_04430	0.25	+0.7
5,043,976	-		PFR28_04430	0.25	+0.5
5,043,976	-		PFR28_04430	0.25	-0.4
5,044,066	-		PFR28_04430	0.35	-0.3
5,044,092	+		PFR28_04430	0.38	+1.9
5,044,092	+		PFR28_04430	0.38	-1.4
5,044,092	+		PFR28_04430	0.38	+0.7
5,044,093	-		PFR28_04430	0.38	+1.3
5,044,093	-		PFR28_04430	0.38	+0.3
5,044,093	-		PFR28_04430	0.38	-1.5
5,044,137	+		PFR28_04430	0.43	+0.4
5,044,137	+		PFR28_04430	0.43	+0.1
5,044,137	+		PFR28_04430	0.43	+0.2
5,044,138	-		PFR28_04430	0.44	+0.0
5,044,138	-		PFR28_04430	0.44	-0.5
5,044,138	-		PFR28_04430	0.44	+1.5
5,044,368	+		PFR28_04430	0.70	-1.0
5,044,368	+		PFR28_04430	0.70	+1.0
5,044,368	+		PFR28_04430	0.70	-2.8
5,044,368	+		PFR28_04430	0.70	+1.0
5,044,368	+		PFR28_04430	0.70	+1.0
5,044,368	+		PFR28_04430	0.70	-0.7
5,044,368	+		PFR28_04430	0.70	+1.3
5,044,368	+		PFR28_04430	0.70	+1.3
5,044,369	-		PFR28_04430	0.71	-1.6
5,044,369	-		PFR28_04430	0.71	+1.5
5,044,369	-		PFR28_04430	0.71	-0.2
5,044,369	-		PFR28_04430	0.71	-1.7
5,044,381	-		PFR28_04430	0.72	+1.0
5,044,414	+		PFR28_04430	0.76	-0.9
5,044,415	-		PFR28_04430	0.76	-0.7
5,044,416	+		PFR28_04430	0.76	-0.2
5,044,416	+		PFR28_04430	0.76	+1.2
5,044,416	+		PFR28_04430	0.76	+0.8
5,044,416	+		PFR28_04430	0.76	-0.5
5,044,417	-		PFR28_04430	0.76	-1.8
5,044,417	-		PFR28_04430	0.76	-0.1
5,044,417	-		PFR28_04430	0.76	+0.4
5,044,417	-		PFR28_04430	0.76	-4.0
5,044,417	-		PFR28_04430	0.76	-0.7
5,044,417	-		PFR28_04430	0.76	+0.2
5,044,417	-		PFR28_04430	0.76	+1.6
5,044,417	-		PFR28_04430	0.76	-0.1
5,044,417	-		PFR28_04430	0.76	-3.4
5,044,417	-		PFR28_04430	0.76	+0.8
5,044,426	-		PFR28_04430	0.77	+0.6
5,044,533	+		PFR28_04430	0.90	+0.2
5,044,533	+		PFR28_04430	0.90	+0.6
5,044,533	+		PFR28_04430	0.90	+0.9
5,044,533	+		PFR28_04430	0.90	+0.3
5,044,534	-		PFR28_04430	0.90	-0.7
5,044,534	-		PFR28_04430	0.90	-0.3
5,044,534	-		PFR28_04430	0.90	-1.5
5,044,534	-		PFR28_04430	0.90	+0.2
5,044,556	+				+0.1
5,044,557	-				-1.0
5,044,651	-				+0.0
5,044,695	+				+0.5
5,044,695	+				+0.9
5,044,696	-				+0.6
5,044,696	-				+2.1
5,044,700	+				-1.1
5,044,700	+				+0.9
5,044,700	+				+0.0
5,044,701	-				-1.2
5,044,703	+				-1.8
5,044,704	-				+1.7
5,044,704	-				+1.3