Experiment: Nickel (II) chloride 80 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14440 and IAI46_14445 are separated by 62 nucleotides IAI46_14445 and IAI46_14450 are separated by 109 nucleotides
IAI46_14440: IAI46_14440 - ABC transporter permease subunit, at 3,062,402 to 3,064,120
_14440
IAI46_14445: IAI46_14445 - 3'-5' exoribonuclease, at 3,064,183 to 3,064,743
_14445
IAI46_14450: IAI46_14450 - multidrug effflux MFS transporter, at 3,064,853 to 3,066,046
_14450
Position (kb)
3064
3065 Strain fitness (log2 ratio)
-1
0
1
2 at 3063.339 kb on + strand, within IAI46_14440 at 3063.606 kb on + strand, within IAI46_14440 at 3063.606 kb on + strand, within IAI46_14440 at 3063.643 kb on + strand, within IAI46_14440 at 3063.807 kb on - strand, within IAI46_14440 at 3063.808 kb on + strand, within IAI46_14440 at 3063.808 kb on + strand, within IAI46_14440 at 3063.860 kb on + strand, within IAI46_14440 at 3064.144 kb on - strand at 3064.147 kb on - strand at 3064.158 kb on + strand at 3064.220 kb on + strand at 3064.512 kb on + strand, within IAI46_14445 at 3064.690 kb on + strand at 3064.928 kb on - strand at 3065.045 kb on + strand, within IAI46_14450 at 3065.085 kb on - strand, within IAI46_14450 at 3065.343 kb on + strand, within IAI46_14450 at 3065.344 kb on - strand, within IAI46_14450 at 3065.344 kb on - strand, within IAI46_14450 at 3065.344 kb on - strand, within IAI46_14450 at 3065.348 kb on + strand, within IAI46_14450 at 3065.348 kb on + strand, within IAI46_14450 at 3065.348 kb on + strand, within IAI46_14450 at 3065.348 kb on + strand, within IAI46_14450 at 3065.349 kb on - strand, within IAI46_14450 at 3065.379 kb on + strand, within IAI46_14450 at 3065.520 kb on - strand, within IAI46_14450 at 3065.706 kb on + strand, within IAI46_14450 at 3065.706 kb on + strand, within IAI46_14450 at 3065.707 kb on - strand, within IAI46_14450
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 80 uM, anaerobic remove 3,063,339 + IAI46_14440 0.55 +0.6 3,063,606 + IAI46_14440 0.70 +0.3 3,063,606 + IAI46_14440 0.70 +1.0 3,063,643 + IAI46_14440 0.72 -0.9 3,063,807 - IAI46_14440 0.82 +1.3 3,063,808 + IAI46_14440 0.82 +0.2 3,063,808 + IAI46_14440 0.82 +0.4 3,063,860 + IAI46_14440 0.85 -0.2 3,064,144 - +0.4 3,064,147 - +0.8 3,064,158 + +1.3 3,064,220 + +1.3 3,064,512 + IAI46_14445 0.59 +0.8 3,064,690 + +0.6 3,064,928 - -0.4 3,065,045 + IAI46_14450 0.16 +1.0 3,065,085 - IAI46_14450 0.19 -0.1 3,065,343 + IAI46_14450 0.41 -0.1 3,065,344 - IAI46_14450 0.41 +0.3 3,065,344 - IAI46_14450 0.41 +0.2 3,065,344 - IAI46_14450 0.41 -0.0 3,065,348 + IAI46_14450 0.41 -0.4 3,065,348 + IAI46_14450 0.41 +1.0 3,065,348 + IAI46_14450 0.41 +0.1 3,065,348 + IAI46_14450 0.41 -0.2 3,065,349 - IAI46_14450 0.42 +0.4 3,065,379 + IAI46_14450 0.44 +0.3 3,065,520 - IAI46_14450 0.56 +1.8 3,065,706 + IAI46_14450 0.71 -0.1 3,065,706 + IAI46_14450 0.71 +0.2 3,065,707 - IAI46_14450 0.72 -0.2
Or see this region's nucleotide sequence